RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 BATF2Q8N1L9 274 aa19.18■□□□□ 0.66
IRF3-201ENST00000309877 ITLN2Q8WWU7 325 aaPredicted RBP19.18■□□□□ 0.66
IRF3-201ENST00000309877 AQP3Q92482 292 aa19.18■□□□□ 0.66
IRF3-201ENST00000309877 MRPL24Q96A35 216 aaKnown RBP19.18■□□□□ 0.66
IRF3-201ENST00000309877 ZNF442Q9H7R0 627 aa19.18■□□□□ 0.66
IRF3-201ENST00000309877 MTCH1Q9NZJ7 389 aa19.18■□□□□ 0.66
IRF3-201ENST00000309877 TAAR3PQ9P1P4 343 aa19.18■□□□□ 0.66
IRF3-201ENST00000309877 KLK11Q9UBX7 282 aa19.18■□□□□ 0.66
IRF3-201ENST00000309877 NBASA2RRP1 2371 aa19.18■□□□□ 0.66
IRF3-201ENST00000309877 WIPF3A6NGB9 483 aa19.17■□□□□ 0.66
IRF3-201ENST00000309877 F5H5P2 479 aa19.17■□□□□ 0.66
IRF3-201ENST00000309877 SULT1C2O00338 296 aa19.17■□□□□ 0.66
IRF3-201ENST00000309877 RBBP9O75884 186 aa19.17■□□□□ 0.66
IRF3-201ENST00000309877 CD3EP07766 207 aa19.17■□□□□ 0.66
IRF3-201ENST00000309877 MPZP25189 248 aa19.17■□□□□ 0.66
IRF3-201ENST00000309877 SRP9P49458 86 aaKnown RBP19.17■□□□□ 0.66
IRF3-201ENST00000309877 GUCA2AQ02747 115 aa19.17■□□□□ 0.66
IRF3-201ENST00000309877 SCCPDHQ8NBX0 429 aa19.17■□□□□ 0.66
IRF3-201ENST00000309877 COX4I2Q96KJ9 171 aa19.17■□□□□ 0.66
IRF3-201ENST00000309877 C11orf54Q9H0W9 315 aaPredicted RBP19.17■□□□□ 0.66
IRF3-201ENST00000309877 SCPEP1Q9HB40 452 aa19.17■□□□□ 0.66
IRF3-201ENST00000309877 ST3GAL6Q9Y274 331 aa19.17■□□□□ 0.66
IRF3-201ENST00000309877 POLDIP2Q9Y2S7 368 aa19.17■□□□□ 0.66
IRF3-201ENST00000309877 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP19.17■□□□□ 0.66
IRF3-201ENST00000309877 A0A1B0GWJ7 208 aa19.17■□□□□ 0.66
IRF3-201ENST00000309877 GSTT2BP0CG30 244 aa19.17■□□□□ 0.66
IRF3-201ENST00000309877 HIST1H1DP16402 221 aaKnown RBP19.17■□□□□ 0.66
IRF3-201ENST00000309877 TMEM50BP56557 158 aa19.17■□□□□ 0.66
IRF3-201ENST00000309877 TAF9Q16594 264 aa19.17■□□□□ 0.66
IRF3-201ENST00000309877 ELP2Q6IA86 826 aa19.17■□□□□ 0.66
IRF3-201ENST00000309877 MZT2BQ6NZ67 158 aa19.17■□□□□ 0.66
IRF3-201ENST00000309877 DNM1P46Q6ZS02 220 aa19.17■□□□□ 0.66
IRF3-201ENST00000309877 Q8NFD4 153 aa19.17■□□□□ 0.66
IRF3-201ENST00000309877 OR2Z1Q8NG97 314 aa19.17■□□□□ 0.66
IRF3-201ENST00000309877 SEH1LQ96EE3 360 aa19.17■□□□□ 0.66
IRF3-201ENST00000309877 RBMX2Q9Y388 322 aaKnown RBP19.17■□□□□ 0.66
IRF3-201ENST00000309877 IGHV3-64DA0A0J9YX35 117 aa19.16■□□□□ 0.66
IRF3-201ENST00000309877 H7C417 338 aa19.16■□□□□ 0.66
IRF3-201ENST00000309877 LYRM1O43325 122 aa19.16■□□□□ 0.66
IRF3-201ENST00000309877 AKR7A2O43488 359 aa19.16■□□□□ 0.66
IRF3-201ENST00000309877 ECDO95905 644 aaPredicted RBP19.16■□□□□ 0.66
IRF3-201ENST00000309877 LPLP06858 475 aa19.16■□□□□ 0.66
IRF3-201ENST00000309877 GSTP1P09211 210 aaKnown RBP19.16■□□□□ 0.66
IRF3-201ENST00000309877 AP3S2P59780 193 aa19.16■□□□□ 0.66
IRF3-201ENST00000309877 ZNF154Q13106 437 aa19.16■□□□□ 0.66
IRF3-201ENST00000309877 NKPD1Q17RQ9 610 aa19.16■□□□□ 0.66
IRF3-201ENST00000309877 PIGYQ3MUY2 71 aa19.16■□□□□ 0.66
IRF3-201ENST00000309877 BEX5Q5H9J7 111 aa19.16■□□□□ 0.66
IRF3-201ENST00000309877 PLAC9Q5JTB6 97 aa19.16■□□□□ 0.66
IRF3-201ENST00000309877 GDPD3Q7L5L3 318 aa19.16■□□□□ 0.66
IRF3-201ENST00000309877 GPX8Q8TED1 209 aa19.16■□□□□ 0.66
IRF3-201ENST00000309877 ARHGAP5-AS1Q96IT6 56 aa19.16■□□□□ 0.66
IRF3-201ENST00000309877 RBFOX1Q9NWB1 397 aaKnown RBP19.16■□□□□ 0.66
IRF3-201ENST00000309877 MTFP1Q9UDX5 166 aa19.16■□□□□ 0.66
IRF3-201ENST00000309877 ELF5Q9UKW6 265 aaPredicted RBP19.16■□□□□ 0.66
IRF3-201ENST00000309877 KALRNO60229 2985 aa19.16■□□□□ 0.66
IRF3-201ENST00000309877 IGSF10Q6WRI0 2623 aa19.16■□□□□ 0.66
IRF3-201ENST00000309877 CDIPTO14735 213 aa19.15■□□□□ 0.66
IRF3-201ENST00000309877 MELTFP08582 738 aa19.15■□□□□ 0.66
IRF3-201ENST00000309877 OR4A8P0C604 315 aa19.15■□□□□ 0.66
IRF3-201ENST00000309877 RBM11P57052 281 aaKnown RBP19.15■□□□□ 0.66
IRF3-201ENST00000309877 FGF12P61328 243 aa19.15■□□□□ 0.66
IRF3-201ENST00000309877 ARL6IP1Q15041 203 aa19.15■□□□□ 0.66
IRF3-201ENST00000309877 GTF3AQ92664 365 aaKnown RBP19.15■□□□□ 0.66
IRF3-201ENST00000309877 MEIS3P1A6NDR6 274 aa19.14■□□□□ 0.66
IRF3-201ENST00000309877 ZSCAN5BA6NJL1 495 aa19.14■□□□□ 0.66
IRF3-201ENST00000309877 CENPXA8MT69 81 aa19.14■□□□□ 0.66
IRF3-201ENST00000309877 FOXI3A8MTJ6 420 aaPredicted RBP19.14■□□□□ 0.66
IRF3-201ENST00000309877 SHISA9B4DS77 424 aa19.14■□□□□ 0.66
IRF3-201ENST00000309877 GEMIN2O14893 280 aaKnown RBP19.14■□□□□ 0.66
IRF3-201ENST00000309877 RHBDL1O75783 438 aa19.14■□□□□ 0.66
IRF3-201ENST00000309877 MAB21L1Q13394 359 aa19.14■□□□□ 0.66
IRF3-201ENST00000309877 ELMOD3Q96FG2 381 aa19.14■□□□□ 0.66
IRF3-201ENST00000309877 POM121Q96HA1 1249 aa19.14■□□□□ 0.66
IRF3-201ENST00000309877 ZNF488Q96MN9 340 aa19.14■□□□□ 0.66
IRF3-201ENST00000309877 NEDD4LQ96PU5 975 aa19.14■□□□□ 0.66
IRF3-201ENST00000309877 PECRQ9BY49 303 aa19.14■□□□□ 0.66
IRF3-201ENST00000309877 PLK3Q9H4B4 646 aa19.14■□□□□ 0.66
IRF3-201ENST00000309877 CACNG2Q9Y698 323 aa19.14■□□□□ 0.66
IRF3-201ENST00000309877 A0A1B0GVG6 124 aa19.14■□□□□ 0.65
IRF3-201ENST00000309877 A6NLC8 198 aa19.14■□□□□ 0.65
IRF3-201ENST00000309877 F8VVB4 439 aa19.14■□□□□ 0.65
IRF3-201ENST00000309877 F8VWA3 439 aa19.14■□□□□ 0.65
IRF3-201ENST00000309877 GNG2P59768 71 aa19.14■□□□□ 0.65
IRF3-201ENST00000309877 KLF9Q13886 244 aaPredicted RBP19.14■□□□□ 0.65
IRF3-201ENST00000309877 ADIPOQQ15848 244 aa19.14■□□□□ 0.65
IRF3-201ENST00000309877 PNLIPRP3Q17RR3 467 aa19.14■□□□□ 0.65
IRF3-201ENST00000309877 NKAPLQ5M9Q1 402 aa19.14■□□□□ 0.65
IRF3-201ENST00000309877 Q6ZNX1 250 aa19.14■□□□□ 0.65
IRF3-201ENST00000309877 NRARPQ7Z6K4 114 aa19.14■□□□□ 0.65
IRF3-201ENST00000309877 RTN4RL2Q86UN3 420 aa19.14■□□□□ 0.65
IRF3-201ENST00000309877 ZNF843Q8N446 348 aa19.14■□□□□ 0.65
IRF3-201ENST00000309877 RHOFQ9HBH0 211 aa19.14■□□□□ 0.65
IRF3-201ENST00000309877 PLEKHJ1Q9NW61 149 aa19.14■□□□□ 0.65
IRF3-201ENST00000309877 TAS2R8Q9NYW2 309 aa19.14■□□□□ 0.65
IRF3-201ENST00000309877 MFNGO00587 321 aa19.13■□□□□ 0.65
IRF3-201ENST00000309877 SPRY3O43610 288 aa19.13■□□□□ 0.65
IRF3-201ENST00000309877 PRKACAP17612 351 aa19.13■□□□□ 0.65
IRF3-201ENST00000309877 ZNF81P51508 661 aa19.13■□□□□ 0.65
IRF3-201ENST00000309877 SNU13P55769 128 aaKnown RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms