RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 GSTT2P0CG29 244 aa18.26■□□□□ 0.51
ATG4D-201ENST00000309469 PTGER4P35408 488 aa18.26■□□□□ 0.51
ATG4D-201ENST00000309469 NDUFA5Q16718 116 aa18.26■□□□□ 0.51
ATG4D-201ENST00000309469 SPATA46Q5T0L3 261 aa18.26■□□□□ 0.51
ATG4D-201ENST00000309469 OR2T2Q6IF00 324 aa18.26■□□□□ 0.51
ATG4D-201ENST00000309469 NLRC3Q7RTR2 1065 aa18.26■□□□□ 0.51
ATG4D-201ENST00000309469 CXorf67Q86X51 503 aaPredicted RBP18.26■□□□□ 0.51
ATG4D-201ENST00000309469 MUC20Q8N307 709 aaPredicted RBP18.26■□□□□ 0.51
ATG4D-201ENST00000309469 C9orf62Q8N4C0 152 aa18.26■□□□□ 0.51
ATG4D-201ENST00000309469 OR5P3Q8WZ94 311 aa18.26■□□□□ 0.51
ATG4D-201ENST00000309469 ZNF581Q9P0T4 197 aa18.26■□□□□ 0.51
ATG4D-201ENST00000309469 ZNF230Q9UIE0 474 aaPredicted RBP18.26■□□□□ 0.51
ATG4D-201ENST00000309469 ST3GAL6Q9Y274 331 aa18.26■□□□□ 0.51
ATG4D-201ENST00000309469 VSIG4Q9Y279 399 aa18.26■□□□□ 0.51
ATG4D-201ENST00000309469 FAM215AQ9Y5M1 114 aa18.26■□□□□ 0.51
ATG4D-201ENST00000309469 LILRA1O75019 489 aa18.25■□□□□ 0.51
ATG4D-201ENST00000309469 OR4E1P0C645 316 aa18.25■□□□□ 0.51
ATG4D-201ENST00000309469 CHATP28329 748 aa18.25■□□□□ 0.51
ATG4D-201ENST00000309469 HAAOP46952 286 aa18.25■□□□□ 0.51
ATG4D-201ENST00000309469 SNU13P55769 128 aaKnown RBP18.25■□□□□ 0.51
ATG4D-201ENST00000309469 C1orf185Q5T7R7 199 aa18.25■□□□□ 0.51
ATG4D-201ENST00000309469 FAM180AQ6UWF9 173 aa18.25■□□□□ 0.51
ATG4D-201ENST00000309469 FBXW12Q6X9E4 464 aa18.25■□□□□ 0.51
ATG4D-201ENST00000309469 SAXO1Q8IYX7 474 aa18.25■□□□□ 0.51
ATG4D-201ENST00000309469 ZDHHC22Q8N966 263 aa18.25■□□□□ 0.51
ATG4D-201ENST00000309469 Q8NFD4 153 aa18.25■□□□□ 0.51
ATG4D-201ENST00000309469 EMG1Q92979 244 aaKnown RBP18.25■□□□□ 0.51
ATG4D-201ENST00000309469 FAAP24Q9BTP7 215 aa18.25■□□□□ 0.51
ATG4D-201ENST00000309469 ZNF71Q9NQZ8 489 aaPredicted RBP18.25■□□□□ 0.51
ATG4D-201ENST00000309469 TP53TG5Q9Y2B4 290 aa18.25■□□□□ 0.51
ATG4D-201ENST00000309469 K7ENP7 123 aa18.25■□□□□ 0.51
ATG4D-201ENST00000309469 NPBWR2P48146 333 aa18.25■□□□□ 0.51
ATG4D-201ENST00000309469 PPP1CBP62140 327 aa18.25■□□□□ 0.51
ATG4D-201ENST00000309469 SNRPD2P62316 118 aaKnown RBP18.25■□□□□ 0.51
ATG4D-201ENST00000309469 P2RY6Q15077 328 aa18.25■□□□□ 0.51
ATG4D-201ENST00000309469 TBR1Q16650 682 aa18.25■□□□□ 0.51
ATG4D-201ENST00000309469 ARRDC1Q8N5I2 433 aa18.25■□□□□ 0.51
ATG4D-201ENST00000309469 OR5H2Q8NGV7 314 aa18.25■□□□□ 0.51
ATG4D-201ENST00000309469 C1QTNF6Q9BXI9 259 aa18.25■□□□□ 0.51
ATG4D-201ENST00000309469 OR2AT4A6NND4 320 aa18.24■□□□□ 0.51
ATG4D-201ENST00000309469 AGFG2O95081 481 aa18.24■□□□□ 0.51
ATG4D-201ENST00000309469 IGKV3-15P01624 115 aa18.24■□□□□ 0.51
ATG4D-201ENST00000309469 DNASE1P24855 282 aa18.24■□□□□ 0.51
ATG4D-201ENST00000309469 RBM11P57052 281 aaKnown RBP18.24■□□□□ 0.51
ATG4D-201ENST00000309469 TMEM200AQ86VY9 491 aa18.24■□□□□ 0.51
ATG4D-201ENST00000309469 C17orf78Q8N4C9 275 aa18.24■□□□□ 0.51
ATG4D-201ENST00000309469 OR11H4Q8NGC9 324 aa18.24■□□□□ 0.51
ATG4D-201ENST00000309469 OR10AD1Q8NGE0 317 aa18.24■□□□□ 0.51
ATG4D-201ENST00000309469 OR2T35Q8NGX2 323 aa18.24■□□□□ 0.51
ATG4D-201ENST00000309469 POM121Q96HA1 1249 aa18.24■□□□□ 0.51
ATG4D-201ENST00000309469 RADILQ96JH8 1075 aa18.24■□□□□ 0.51
ATG4D-201ENST00000309469 CA10Q9NS85 328 aa18.24■□□□□ 0.51
ATG4D-201ENST00000309469 TAS2R46P59540 309 aa18.23■□□□□ 0.51
ATG4D-201ENST00000309469 BEND4Q6ZU67 534 aa18.23■□□□□ 0.51
ATG4D-201ENST00000309469 MAFIPQ8WZ33 124 aa18.23■□□□□ 0.51
ATG4D-201ENST00000309469 SLAMF9Q96A28 289 aa18.23■□□□□ 0.51
ATG4D-201ENST00000309469 OR2J1Q9GZK6 312 aa18.23■□□□□ 0.51
ATG4D-201ENST00000309469 AK3Q9UIJ7 227 aa18.23■□□□□ 0.51
ATG4D-201ENST00000309469 IL2RAP01589 272 aa18.23■□□□□ 0.51
ATG4D-201ENST00000309469 OR3A3P47888 321 aa18.23■□□□□ 0.51
ATG4D-201ENST00000309469 UCP2P55851 309 aa18.23■□□□□ 0.51
ATG4D-201ENST00000309469 EIF2S3LQ2VIR3 472 aaKnown RBP18.23■□□□□ 0.51
ATG4D-201ENST00000309469 ZNF324BQ6AW86 544 aaPredicted RBP18.23■□□□□ 0.51
ATG4D-201ENST00000309469 MKXQ8IYA7 352 aa18.23■□□□□ 0.51
ATG4D-201ENST00000309469 TERB2Q8NHR7 220 aa18.23■□□□□ 0.51
ATG4D-201ENST00000309469 FAM57AQ8TBR7 257 aa18.23■□□□□ 0.51
ATG4D-201ENST00000309469 CCDC120Q96HB5 630 aa18.23■□□□□ 0.51
ATG4D-201ENST00000309469 SULT4A1Q9BR01 284 aa18.23■□□□□ 0.51
ATG4D-201ENST00000309469 HDHD3Q9BSH5 251 aaPredicted RBP18.23■□□□□ 0.51
ATG4D-201ENST00000309469 CHIAQ9BZP6 476 aa18.23■□□□□ 0.51
ATG4D-201ENST00000309469 ZNF701Q9NV72 531 aaPredicted RBP18.23■□□□□ 0.51
ATG4D-201ENST00000309469 CUL9Q8IWT3 2517 aa18.23■□□□□ 0.51
ATG4D-201ENST00000309469 OR5B21A6NL26 309 aa18.22■□□□□ 0.51
ATG4D-201ENST00000309469 GIPP09681 153 aaPredicted RBP18.22■□□□□ 0.51
ATG4D-201ENST00000309469 BCL3P20749 454 aa18.22■□□□□ 0.51
ATG4D-201ENST00000309469 CA6P23280 308 aa18.22■□□□□ 0.51
ATG4D-201ENST00000309469 ELP2Q6IA86 826 aa18.22■□□□□ 0.51
ATG4D-201ENST00000309469 C17orf107Q6ZR85 190 aa18.22■□□□□ 0.51
ATG4D-201ENST00000309469 SLC25A42Q86VD7 318 aa18.22■□□□□ 0.51
ATG4D-201ENST00000309469 SLC7A5P1Q8MH63 180 aa18.22■□□□□ 0.51
ATG4D-201ENST00000309469 RPRMLQ8N4K4 120 aa18.22■□□□□ 0.51
ATG4D-201ENST00000309469 OR2AK2Q8NG84 335 aa18.22■□□□□ 0.51
ATG4D-201ENST00000309469 OR5AP2Q8NGF4 316 aa18.22■□□□□ 0.51
ATG4D-201ENST00000309469 EXTL1Q92935 676 aa18.22■□□□□ 0.51
ATG4D-201ENST00000309469 DOCK7Q96N67 2140 aa18.22■□□□□ 0.51
ATG4D-201ENST00000309469 PRRC2CQ9Y520 2896 aaKnown RBP18.21■□□□□ 0.51
ATG4D-201ENST00000309469 H3BUI4 141 aa18.21■□□□□ 0.51
ATG4D-201ENST00000309469 TIMP3P35625 211 aa18.21■□□□□ 0.51
ATG4D-201ENST00000309469 UBE2MP61081 183 aaKnown RBP18.21■□□□□ 0.51
ATG4D-201ENST00000309469 ERVS71-1P61550 626 aa18.21■□□□□ 0.51
ATG4D-201ENST00000309469 TSPAN5P62079 268 aa18.21■□□□□ 0.51
ATG4D-201ENST00000309469 GNG3P63215 75 aa18.21■□□□□ 0.51
ATG4D-201ENST00000309469 BHLHA15Q7RTS1 189 aaPredicted RBP18.21■□□□□ 0.51
ATG4D-201ENST00000309469 BATF2Q8N1L9 274 aa18.21■□□□□ 0.51
ATG4D-201ENST00000309469 UXS1Q8NBZ7 420 aa18.21■□□□□ 0.51
ATG4D-201ENST00000309469 OR1J1Q8NGS3 322 aa18.21■□□□□ 0.51
ATG4D-201ENST00000309469 GRPEL2Q8TAA5 225 aa18.21■□□□□ 0.51
ATG4D-201ENST00000309469 SLC25A40Q8TBP6 338 aa18.21■□□□□ 0.51
ATG4D-201ENST00000309469 CMSS1Q9BQ75 279 aaKnown RBP18.21■□□□□ 0.51
ATG4D-201ENST00000309469 OBP2BQ9NPH6 170 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms