RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 KHDC1LQ5JSQ8 128 aa14.14□□□□□ -0.15
USP42-201ENST00000306177 SLC25A30Q5SVS4 291 aa14.14□□□□□ -0.15
USP42-201ENST00000306177 TRAT1Q6PIZ9 186 aa14.14□□□□□ -0.15
USP42-201ENST00000306177 SKA3Q8IX90 412 aa14.14□□□□□ -0.15
USP42-201ENST00000306177 C10orf111Q8N326 155 aa14.14□□□□□ -0.15
USP42-201ENST00000306177 ADAM10O14672 748 aa14.14□□□□□ -0.15
USP42-201ENST00000306177 LYZL6O75951 148 aa14.14□□□□□ -0.15
USP42-201ENST00000306177 BMP5P22003 454 aa14.14□□□□□ -0.15
USP42-201ENST00000306177 KCNJ3P48549 501 aa14.14□□□□□ -0.15
USP42-201ENST00000306177 PPP1R1AQ13522 171 aa14.14□□□□□ -0.15
USP42-201ENST00000306177 IGFBP7Q16270 282 aa14.14□□□□□ -0.15
USP42-201ENST00000306177 PHYHD1Q5SRE7 291 aa14.14□□□□□ -0.15
USP42-201ENST00000306177 OR8B12Q8NGG6 310 aa14.14□□□□□ -0.15
USP42-201ENST00000306177 ERRFI1Q9UJM3 462 aaPredicted RBP14.14□□□□□ -0.15
USP42-201ENST00000306177 OR5B21A6NL26 309 aa14.14□□□□□ -0.15
USP42-201ENST00000306177 CST7O76096 145 aa14.14□□□□□ -0.15
USP42-201ENST00000306177 KRASP01116 189 aa14.14□□□□□ -0.15
USP42-201ENST00000306177 PGA3P0DJD8 388 aa14.14□□□□□ -0.15
USP42-201ENST00000306177 MVDP53602 400 aa14.14□□□□□ -0.15
USP42-201ENST00000306177 PPP1CBP62140 327 aa14.14□□□□□ -0.15
USP42-201ENST00000306177 ISXQ2M1V0 245 aa14.14□□□□□ -0.15
USP42-201ENST00000306177 VMA21Q3ZAQ7 101 aa14.14□□□□□ -0.15
USP42-201ENST00000306177 HES7Q9BYE0 225 aa14.14□□□□□ -0.15
USP42-201ENST00000306177 GLRX2Q9NS18 164 aa14.14□□□□□ -0.15
USP42-201ENST00000306177 IGHV5-10-1A0A0J9YXX1 117 aa14.14□□□□□ -0.15
USP42-201ENST00000306177 PATE4P0C8F1 98 aa14.14□□□□□ -0.15
USP42-201ENST00000306177 ZAR1Q86SH2 424 aa14.14□□□□□ -0.15
USP42-201ENST00000306177 MUC20Q8N307 709 aaPredicted RBP14.14□□□□□ -0.15
USP42-201ENST00000306177 PIK3IP1Q96FE7 263 aa14.14□□□□□ -0.15
USP42-201ENST00000306177 OR51I2Q9H344 312 aa14.14□□□□□ -0.15
USP42-201ENST00000306177 PMP22Q01453 160 aa14.13□□□□□ -0.15
USP42-201ENST00000306177 SPICQ8N5J4 248 aa14.13□□□□□ -0.15
USP42-201ENST00000306177 C21orf140B9A014 251 aa14.13□□□□□ -0.15
USP42-201ENST00000306177 TMEM104Q8NE00 496 aa14.13□□□□□ -0.15
USP42-201ENST00000306177 TVP23CQ96ET8 276 aa14.13□□□□□ -0.15
USP42-201ENST00000306177 MPC1Q9Y5U8 109 aa14.13□□□□□ -0.15
USP42-201ENST00000306177 TLE1Q04724 770 aa14.13□□□□□ -0.15
USP42-201ENST00000306177 UBALD1Q8TB05 177 aa14.13□□□□□ -0.15
USP42-201ENST00000306177 NEURL2Q9BR09 285 aa14.13□□□□□ -0.15
USP42-201ENST00000306177 UBE2L5PA0A1B0GUS4 154 aa14.13□□□□□ -0.15
USP42-201ENST00000306177 ANKRD20A5PA0PJZ0 165 aa14.13□□□□□ -0.15
USP42-201ENST00000306177 TRIM77I1YAP6 450 aa14.13□□□□□ -0.15
USP42-201ENST00000306177 COX7A2P2O60397 106 aa14.13□□□□□ -0.15
USP42-201ENST00000306177 CCL2P13500 99 aa14.13□□□□□ -0.15
USP42-201ENST00000306177 ZNF770Q6IQ21 691 aaPredicted RBP14.13□□□□□ -0.15
USP42-201ENST00000306177 TMEM108Q6UXF1 575 aa14.13□□□□□ -0.15
USP42-201ENST00000306177 OR13D1Q8NGV5 346 aa14.13□□□□□ -0.15
USP42-201ENST00000306177 OR5B3Q8NH48 314 aa14.13□□□□□ -0.15
USP42-201ENST00000306177 ZNF251Q9BRH9 671 aa14.13□□□□□ -0.15
USP42-201ENST00000306177 FZR1Q9UM11 496 aa14.13□□□□□ -0.15
USP42-201ENST00000306177 TDRD15B5MCY1 1934 aaKnown RBP14.13□□□□□ -0.15
USP42-201ENST00000306177 TGOLN2O43493 480 aa14.12□□□□□ -0.15
USP42-201ENST00000306177 SLC25A4P12235 298 aa14.12□□□□□ -0.15
USP42-201ENST00000306177 NTNG2Q96CW9 530 aa14.12□□□□□ -0.15
USP42-201ENST00000306177 SAT2Q96F10 170 aaPredicted RBP14.12□□□□□ -0.15
USP42-201ENST00000306177 C10orf90Q96M02 699 aa14.12□□□□□ -0.15
USP42-201ENST00000306177 ZNFX1Q9P2E3 1918 aaKnown RBP14.12□□□□□ -0.15
USP42-201ENST00000306177 C9orf170A2RU37 121 aa14.12□□□□□ -0.15
USP42-201ENST00000306177 MOB3BQ86TA1 216 aa14.12□□□□□ -0.15
USP42-201ENST00000306177 LRRTM1Q86UE6 522 aa14.12□□□□□ -0.15
USP42-201ENST00000306177 SFTPA2Q8IWL1 248 aa14.12□□□□□ -0.15
USP42-201ENST00000306177 OR5M8Q8NGP6 311 aa14.12□□□□□ -0.15
USP42-201ENST00000306177 PTP4A1Q93096 173 aa14.12□□□□□ -0.15
USP42-201ENST00000306177 NDFIP1Q9BT67 221 aa14.12□□□□□ -0.15
USP42-201ENST00000306177 CES1P1Q9UKY3 287 aa14.12□□□□□ -0.15
USP42-201ENST00000306177 NTN1O95631 604 aa14.12□□□□□ -0.15
USP42-201ENST00000306177 CST4P01036 141 aa14.12□□□□□ -0.15
USP42-201ENST00000306177 F2RP25116 425 aa14.12□□□□□ -0.15
USP42-201ENST00000306177 GZMMP51124 257 aa14.12□□□□□ -0.15
USP42-201ENST00000306177 GAB4Q2WGN9 574 aa14.12□□□□□ -0.15
USP42-201ENST00000306177 TMEM230Q96A57 120 aa14.12□□□□□ -0.15
USP42-201ENST00000306177 ABHD1Q96SE0 405 aa14.12□□□□□ -0.15
USP42-201ENST00000306177 KLF3P57682 345 aaPredicted RBP14.12□□□□□ -0.15
USP42-201ENST00000306177 TM4SF19Q96DZ7 209 aa14.12□□□□□ -0.15
USP42-201ENST00000306177 MARVELD1Q9BSK0 173 aa14.12□□□□□ -0.15
USP42-201ENST00000306177 FRRS1LQ9P0K9 344 aa14.12□□□□□ -0.15
USP42-201ENST00000306177 V9GYS6 101 aa14.12□□□□□ -0.15
USP42-201ENST00000306177 HRASP01112 189 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 TMIGD3P0DMS9 266 aaPredicted RBP14.11□□□□□ -0.15
USP42-201ENST00000306177 MPPED2Q15777 294 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 AANATQ16613 207 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 STUMQ69YW2 141 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 NECAP1Q8NC96 275 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 LRRC29Q8WV35 223 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 PLPPR2Q96GM1 343 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 C3orf85A0A1B0GTC6 90 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 FOXS1O43638 330 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 CTRB1P17538 263 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 HNF1AP20823 631 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 SOX8P57073 446 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 CTRB2Q6GPI1 263 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 NAA60Q9H7X0 242 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 WDR54Q9H977 334 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 RASL12Q9NYN1 266 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 NINQ8N4C6 2090 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 PATE3B3GLJ2 98 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 ATP6V1G2-DDX39BF2Z307 99 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 MASP2O00187 686 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 LY86O95711 162 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 CALCRP30988 508 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms