RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 UQCC1Q9NVA1 299 aa19.11■□□□□ 0.65
TPM4-201ENST00000300933 CSAG2Q9Y5P2 127 aa19.11■□□□□ 0.65
TPM4-201ENST00000300933 A0A096LPE4 126 aa19.1■□□□□ 0.65
TPM4-201ENST00000300933 A0A1W2PPZ6 126 aa19.1■□□□□ 0.65
TPM4-201ENST00000300933 FGF16O43320 207 aa19.1■□□□□ 0.65
TPM4-201ENST00000300933 DHRS3O75911 302 aa19.1■□□□□ 0.65
TPM4-201ENST00000300933 CTSSP25774 331 aa19.1■□□□□ 0.65
TPM4-201ENST00000300933 RNASE10Q5GAN6 216 aaKnown RBP19.1■□□□□ 0.65
TPM4-201ENST00000300933 LYG2Q86SG7 212 aa19.1■□□□□ 0.65
TPM4-201ENST00000300933 BOKQ9UMX3 212 aaPredicted RBP19.1■□□□□ 0.65
TPM4-201ENST00000300933 CARHSP1Q9Y2V2 147 aaKnown RBP19.1■□□□□ 0.65
TPM4-201ENST00000300933 ZBTB25P24278 435 aa19.1■□□□□ 0.65
TPM4-201ENST00000300933 HIST1H3AP68431 136 aa19.1■□□□□ 0.65
TPM4-201ENST00000300933 PSG4Q00888 419 aa19.1■□□□□ 0.65
TPM4-201ENST00000300933 HIST2H3PS2Q5TEC6 136 aa19.1■□□□□ 0.65
TPM4-201ENST00000300933 TSPO2Q5TGU0 170 aa19.1■□□□□ 0.65
TPM4-201ENST00000300933 HIST2H3AQ71DI3 136 aa19.1■□□□□ 0.65
TPM4-201ENST00000300933 SKA3Q8IX90 412 aa19.1■□□□□ 0.65
TPM4-201ENST00000300933 MRGPRFQ96AM1 343 aa19.1■□□□□ 0.65
TPM4-201ENST00000300933 RAB3CQ96E17 227 aa19.1■□□□□ 0.65
TPM4-201ENST00000300933 FOXB1Q99853 325 aa19.1■□□□□ 0.65
TPM4-201ENST00000300933 C9orf170A2RU37 121 aa19.09■□□□□ 0.65
TPM4-201ENST00000300933 TERTO14746 1132 aaKnown RBP19.09■□□□□ 0.65
TPM4-201ENST00000300933 OTX1P32242 354 aaPredicted RBP19.09■□□□□ 0.65
TPM4-201ENST00000300933 HTR5AP47898 357 aa19.09■□□□□ 0.65
TPM4-201ENST00000300933 SSBP1Q04837 148 aaKnown RBP19.09■□□□□ 0.65
TPM4-201ENST00000300933 ADAD2Q8NCV1 583 aaKnown RBP19.09■□□□□ 0.65
TPM4-201ENST00000300933 SPTSSAQ969W0 71 aa19.09■□□□□ 0.65
TPM4-201ENST00000300933 LOXL4Q96JB6 756 aa19.09■□□□□ 0.65
TPM4-201ENST00000300933 PHB2Q99623 299 aa19.09■□□□□ 0.65
TPM4-201ENST00000300933 ZNF703Q9H7S9 590 aaPredicted RBP19.09■□□□□ 0.65
TPM4-201ENST00000300933 CALHM2Q9HA72 323 aa19.09■□□□□ 0.65
TPM4-201ENST00000300933 ANGPTL7O43827 346 aa19.09■□□□□ 0.65
TPM4-201ENST00000300933 FABP1P07148 127 aa19.09■□□□□ 0.65
TPM4-201ENST00000300933 TPT1P13693 172 aaKnown RBP19.09■□□□□ 0.65
TPM4-201ENST00000300933 SRSF4Q08170 494 aaKnown RBP19.09■□□□□ 0.65
TPM4-201ENST00000300933 SRSF6Q13247 344 aaKnown RBP19.09■□□□□ 0.65
TPM4-201ENST00000300933 OR51T1Q8NGJ9 327 aa19.09■□□□□ 0.65
TPM4-201ENST00000300933 FNDC9Q8TBE3 224 aa19.09■□□□□ 0.65
TPM4-201ENST00000300933 RNF141Q8WVD5 230 aa19.09■□□□□ 0.65
TPM4-201ENST00000300933 FAM173AQ9BQD7 235 aa19.09■□□□□ 0.65
TPM4-201ENST00000300933 GPR87Q9BY21 358 aa19.09■□□□□ 0.65
TPM4-201ENST00000300933 ZFHX2Q9C0A1 2572 aaPredicted RBP19.09■□□□□ 0.65
TPM4-201ENST00000300933 A0A0A6YYH2 397 aa19.08■□□□□ 0.65
TPM4-201ENST00000300933 A6NJ64 397 aa19.08■□□□□ 0.65
TPM4-201ENST00000300933 SYNGR3O43761 229 aa19.08■□□□□ 0.65
TPM4-201ENST00000300933 CCL2P13500 99 aa19.08■□□□□ 0.65
TPM4-201ENST00000300933 C10orf91Q5T1B1 145 aa19.08■□□□□ 0.65
TPM4-201ENST00000300933 SLC16A14Q7RTX9 510 aa19.08■□□□□ 0.65
TPM4-201ENST00000300933 BAP18Q8IXM2 172 aa19.08■□□□□ 0.65
TPM4-201ENST00000300933 BATF2Q8N1L9 274 aa19.08■□□□□ 0.65
TPM4-201ENST00000300933 ADAMTS17Q8TE56 1095 aa19.08■□□□□ 0.65
TPM4-201ENST00000300933 INTS12Q96CB8 462 aaKnown RBP19.08■□□□□ 0.65
TPM4-201ENST00000300933 TTTY12Q9BZ98 90 aa19.08■□□□□ 0.65
TPM4-201ENST00000300933 CHMP1AQ9HD42 196 aaPredicted RBP19.08■□□□□ 0.65
TPM4-201ENST00000300933 OR2S2Q9NQN1 319 aa19.08■□□□□ 0.65
TPM4-201ENST00000300933 ZNF581Q9P0T4 197 aa19.08■□□□□ 0.65
TPM4-201ENST00000300933 FAM230AA0A1W2PPH8 454 aa19.08■□□□□ 0.64
TPM4-201ENST00000300933 AKR1C3P42330 323 aa19.08■□□□□ 0.64
TPM4-201ENST00000300933 ECH1Q13011 328 aa19.08■□□□□ 0.64
TPM4-201ENST00000300933 ABLIM2Q6H8Q1 611 aa19.08■□□□□ 0.64
TPM4-201ENST00000300933 ETV3LQ6ZN32 361 aa19.08■□□□□ 0.64
TPM4-201ENST00000300933 LURAP1LQ8IV03 231 aa19.08■□□□□ 0.64
TPM4-201ENST00000300933 TUSC5Q8IXB3 177 aa19.08■□□□□ 0.64
TPM4-201ENST00000300933 OR1F12Q8NHA8 337 aa19.08■□□□□ 0.64
TPM4-201ENST00000300933 KCNG3Q8TAE7 436 aa19.08■□□□□ 0.64
TPM4-201ENST00000300933 GPR35Q9HC97 309 aa19.08■□□□□ 0.64
TPM4-201ENST00000300933 SPTBN2O15020 2390 aa19.08■□□□□ 0.64
TPM4-201ENST00000300933 IGLV3-1P01715 115 aa19.08■□□□□ 0.64
TPM4-201ENST00000300933 CD74P04233 296 aa19.08■□□□□ 0.64
TPM4-201ENST00000300933 IFNA4P05014 189 aa19.08■□□□□ 0.64
TPM4-201ENST00000300933 CD79AP11912 226 aa19.08■□□□□ 0.64
TPM4-201ENST00000300933 CCNOP22674 350 aa19.08■□□□□ 0.64
TPM4-201ENST00000300933 PLGLB1Q02325 96 aa19.08■□□□□ 0.64
TPM4-201ENST00000300933 SLC25A42Q86VD7 318 aa19.08■□□□□ 0.64
TPM4-201ENST00000300933 RRNAD1Q96FB5 475 aaKnown RBP19.08■□□□□ 0.64
TPM4-201ENST00000300933 REEP6Q96HR9 211 aa19.08■□□□□ 0.64
TPM4-201ENST00000300933 ST6GALNAC5Q9BVH7 336 aa19.08■□□□□ 0.64
TPM4-201ENST00000300933 AGPAT2O15120 278 aa19.07■□□□□ 0.64
TPM4-201ENST00000300933 SPRY1O43609 319 aaPredicted RBP19.07■□□□□ 0.64
TPM4-201ENST00000300933 CRYGSP22914 178 aa19.07■□□□□ 0.64
TPM4-201ENST00000300933 LHX2P50458 406 aa19.07■□□□□ 0.64
TPM4-201ENST00000300933 TMEM200AQ86VY9 491 aa19.07■□□□□ 0.64
TPM4-201ENST00000300933 TMEM251Q8N6I4 163 aa19.07■□□□□ 0.64
TPM4-201ENST00000300933 SEC11CQ9BY50 192 aa19.07■□□□□ 0.64
TPM4-201ENST00000300933 SLCO5A1Q9H2Y9 848 aa19.07■□□□□ 0.64
TPM4-201ENST00000300933 NOSIPQ9Y314 301 aaKnown RBP19.07■□□□□ 0.64
TPM4-201ENST00000300933 V9GYS6 101 aa19.07■□□□□ 0.64
TPM4-201ENST00000300933 SVILO95425 2214 aa19.07■□□□□ 0.64
TPM4-201ENST00000300933 A0A0U1RQV5 110 aa19.07■□□□□ 0.64
TPM4-201ENST00000300933 PSMB6P28072 239 aa19.07■□□□□ 0.64
TPM4-201ENST00000300933 TRIP6Q15654 476 aaKnown RBP19.07■□□□□ 0.64
TPM4-201ENST00000300933 TMPRSS7Q7RTY8 843 aa19.07■□□□□ 0.64
TPM4-201ENST00000300933 SSC4DQ8WTU2 575 aa19.07■□□□□ 0.64
TPM4-201ENST00000300933 MITD1Q8WV92 249 aa19.07■□□□□ 0.64
TPM4-201ENST00000300933 OR10A2Q9H208 303 aa19.07■□□□□ 0.64
TPM4-201ENST00000300933 MYOZ1Q9NP98 299 aaPredicted RBP19.07■□□□□ 0.64
TPM4-201ENST00000300933 SLC7A10Q9NS82 523 aa19.07■□□□□ 0.64
TPM4-201ENST00000300933 MGAQ8IWI9 3026 aa19.07■□□□□ 0.64
TPM4-201ENST00000300933 C21orf140B9A014 251 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms