RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 MFFQ9GZY8 342 aa12.59□□□□□ -0.39
SMG8-201ENST00000300917 C5orf66Q9H5L9 145 aa12.59□□□□□ -0.39
SMG8-201ENST00000300917 ZNF816-ZNF321PA0A0X1KG74 233 aa12.59□□□□□ -0.39
SMG8-201ENST00000300917 OR5H14A6NHG9 310 aa12.59□□□□□ -0.39
SMG8-201ENST00000300917 MPTX1A8MV57 137 aa12.59□□□□□ -0.39
SMG8-201ENST00000300917 PLP2Q04941 152 aa12.59□□□□□ -0.39
SMG8-201ENST00000300917 COQ8AQ8NI60 647 aa12.59□□□□□ -0.39
SMG8-201ENST00000300917 CMSS1Q9BQ75 279 aaKnown RBP12.59□□□□□ -0.39
SMG8-201ENST00000300917 TRAF4Q9BUZ4 470 aaPredicted RBP12.59□□□□□ -0.39
SMG8-201ENST00000300917 CDRT15L2A8MXV6 281 aa12.58□□□□□ -0.4
SMG8-201ENST00000300917 MSTNO14793 375 aa12.58□□□□□ -0.4
SMG8-201ENST00000300917 IL18BPO95998 194 aa12.58□□□□□ -0.4
SMG8-201ENST00000300917 PRKACBP22694 351 aa12.58□□□□□ -0.4
SMG8-201ENST00000300917 AGTR1P30556 359 aa12.58□□□□□ -0.4
SMG8-201ENST00000300917 PDZK1IP1Q13113 114 aa12.58□□□□□ -0.4
SMG8-201ENST00000300917 TMUB2Q71RG4 321 aa12.58□□□□□ -0.4
SMG8-201ENST00000300917 MYPOPQ86VE0 399 aaPredicted RBP12.58□□□□□ -0.4
SMG8-201ENST00000300917 PPP1R1CQ8WVI7 109 aa12.58□□□□□ -0.4
SMG8-201ENST00000300917 ZNF442Q9H7R0 627 aa12.58□□□□□ -0.4
SMG8-201ENST00000300917 TRAV14DV4A0A0A6YYC5 116 aa12.58□□□□□ -0.4
SMG8-201ENST00000300917 IDH3GP51553 393 aaPredicted RBP12.58□□□□□ -0.4
SMG8-201ENST00000300917 TCF15Q12870 199 aa12.58□□□□□ -0.4
SMG8-201ENST00000300917 PRDX4Q13162 271 aa12.58□□□□□ -0.4
SMG8-201ENST00000300917 OR2T2Q6IF00 324 aa12.58□□□□□ -0.4
SMG8-201ENST00000300917 ZNF546Q86UE3 836 aa12.58□□□□□ -0.4
SMG8-201ENST00000300917 HOGA1Q86XE5 327 aa12.58□□□□□ -0.4
SMG8-201ENST00000300917 OR10AD1Q8NGE0 317 aa12.58□□□□□ -0.4
SMG8-201ENST00000300917 PHB2Q99623 299 aa12.58□□□□□ -0.4
SMG8-201ENST00000300917 ZNF2Q9BSG1 426 aaPredicted RBP12.58□□□□□ -0.4
SMG8-201ENST00000300917 ALX4Q9H161 411 aaPredicted RBP12.58□□□□□ -0.4
SMG8-201ENST00000300917 BCO1Q9HAY6 547 aa12.58□□□□□ -0.4
SMG8-201ENST00000300917 ALX3O95076 343 aa12.57□□□□□ -0.4
SMG8-201ENST00000300917 MDP1Q86V88 176 aa12.57□□□□□ -0.4
SMG8-201ENST00000300917 CDH26Q8IXH8 852 aa12.57□□□□□ -0.4
SMG8-201ENST00000300917 EMG1Q92979 244 aaKnown RBP12.57□□□□□ -0.4
SMG8-201ENST00000300917 FGF23Q9GZV9 251 aaPredicted RBP12.57□□□□□ -0.4
SMG8-201ENST00000300917 FIGNL2A6NMB9 653 aa12.57□□□□□ -0.4
SMG8-201ENST00000300917 HOXB5P09067 269 aa12.57□□□□□ -0.4
SMG8-201ENST00000300917 RPUSD3Q6P087 351 aaKnown RBP12.57□□□□□ -0.4
SMG8-201ENST00000300917 LHFPL2Q6ZUX7 228 aa12.57□□□□□ -0.4
SMG8-201ENST00000300917 OSR2Q8N2R0 312 aa12.57□□□□□ -0.4
SMG8-201ENST00000300917 ZSCAN4Q8NAM6 433 aaPredicted RBP12.57□□□□□ -0.4
SMG8-201ENST00000300917 OR5M8Q8NGP6 311 aa12.57□□□□□ -0.4
SMG8-201ENST00000300917 OCSTAMPQ9BR26 566 aa12.57□□□□□ -0.4
SMG8-201ENST00000300917 C1QTNF5Q9BXJ0 243 aa12.57□□□□□ -0.4
SMG8-201ENST00000300917 COMMD9Q9P000 198 aa12.57□□□□□ -0.4
SMG8-201ENST00000300917 GHRLQ9UBU3 117 aa12.57□□□□□ -0.4
SMG8-201ENST00000300917 CADP27708 2225 aa12.57□□□□□ -0.4
SMG8-201ENST00000300917 XRCC2O43543 280 aa12.57□□□□□ -0.4
SMG8-201ENST00000300917 SELEP16581 610 aa12.57□□□□□ -0.4
SMG8-201ENST00000300917 SERPINF1P36955 418 aa12.57□□□□□ -0.4
SMG8-201ENST00000300917 ERVS71-1P61550 626 aa12.57□□□□□ -0.4
SMG8-201ENST00000300917 RNPS1Q15287 305 aaKnown RBP12.57□□□□□ -0.4
SMG8-201ENST00000300917 C3P1Q6ZMU1 363 aa12.57□□□□□ -0.4
SMG8-201ENST00000300917 RFPL4BQ6ZWI9 263 aa12.57□□□□□ -0.4
SMG8-201ENST00000300917 NEK7Q8TDX7 302 aa12.57□□□□□ -0.4
SMG8-201ENST00000300917 TMEM230Q96A57 120 aa12.57□□□□□ -0.4
SMG8-201ENST00000300917 SLC2A8Q9NY64 477 aa12.57□□□□□ -0.4
SMG8-201ENST00000300917 GSKIPQ9P0R6 139 aa12.57□□□□□ -0.4
SMG8-201ENST00000300917 ZNF732B4DXR9 585 aa12.56□□□□□ -0.4
SMG8-201ENST00000300917 ACTL6AO96019 429 aa12.56□□□□□ -0.4
SMG8-201ENST00000300917 BCL3P20749 454 aa12.56□□□□□ -0.4
SMG8-201ENST00000300917 S100A11P31949 105 aa12.56□□□□□ -0.4
SMG8-201ENST00000300917 FUT6P51993 359 aa12.56□□□□□ -0.4
SMG8-201ENST00000300917 MALLQ13021 153 aa12.56□□□□□ -0.4
SMG8-201ENST00000300917 PNLIPRP3Q17RR3 467 aa12.56□□□□□ -0.4
SMG8-201ENST00000300917 AADACL3Q5VUY0 350 aa12.56□□□□□ -0.4
SMG8-201ENST00000300917 C17orf78Q8N4C9 275 aa12.56□□□□□ -0.4
SMG8-201ENST00000300917 OR5AP2Q8NGF4 316 aa12.56□□□□□ -0.4
SMG8-201ENST00000300917 UBQLN2Q9UHD9 624 aa12.56□□□□□ -0.4
SMG8-201ENST00000300917 FOXI3A8MTJ6 420 aaPredicted RBP12.56□□□□□ -0.4
SMG8-201ENST00000300917 IFNA7P01567 189 aa12.56□□□□□ -0.4
SMG8-201ENST00000300917 APLNRP35414 380 aa12.56□□□□□ -0.4
SMG8-201ENST00000300917 OR8B8Q15620 311 aa12.56□□□□□ -0.4
SMG8-201ENST00000300917 CLEC18BQ6UXF7 455 aa12.56□□□□□ -0.4
SMG8-201ENST00000300917 MARS2Q96GW9 593 aaKnown RBP12.56□□□□□ -0.4
SMG8-201ENST00000300917 LINC00470Q9BZP3 86 aa12.56□□□□□ -0.4
SMG8-201ENST00000300917 TNRC6AQ8NDV7 1962 aaKnown RBP12.56□□□□□ -0.4
SMG8-201ENST00000300917 AGFG2O95081 481 aa12.56□□□□□ -0.4
SMG8-201ENST00000300917 WNT5AP41221 380 aa12.56□□□□□ -0.4
SMG8-201ENST00000300917 HAGHLQ6PII5 290 aaPredicted RBP12.56□□□□□ -0.4
SMG8-201ENST00000300917 ZDHHC22Q8N966 263 aa12.56□□□□□ -0.4
SMG8-201ENST00000300917 TM2D1Q9BX74 207 aa12.56□□□□□ -0.4
SMG8-201ENST00000300917 LIME1Q9H400 295 aa12.56□□□□□ -0.4
SMG8-201ENST00000300917 CHMP1AQ9HD42 196 aaPredicted RBP12.56□□□□□ -0.4
SMG8-201ENST00000300917 ZNF107Q9UII5 783 aaPredicted RBP12.56□□□□□ -0.4
SMG8-201ENST00000300917 ROS1P08922 2347 aa12.55□□□□□ -0.4
SMG8-201ENST00000300917 SERPINE3A8MV23 424 aa12.55□□□□□ -0.4
SMG8-201ENST00000300917 SYNGR1O43759 233 aa12.55□□□□□ -0.4
SMG8-201ENST00000300917 CA6P23280 308 aa12.55□□□□□ -0.4
SMG8-201ENST00000300917 ALDH3B1P43353 468 aa12.55□□□□□ -0.4
SMG8-201ENST00000300917 HOXA4Q00056 320 aaPredicted RBP12.55□□□□□ -0.4
SMG8-201ENST00000300917 STK11Q15831 433 aa12.55□□□□□ -0.4
SMG8-201ENST00000300917 SP6Q3SY56 376 aa12.55□□□□□ -0.4
SMG8-201ENST00000300917 FBXW9Q5XUX1 488 aa12.55□□□□□ -0.4
SMG8-201ENST00000300917 SLC22A25Q6T423 547 aa12.55□□□□□ -0.4
SMG8-201ENST00000300917 GLRX5Q86SX6 157 aa12.55□□□□□ -0.4
SMG8-201ENST00000300917 RELL2Q8NC24 303 aaPredicted RBP12.55□□□□□ -0.4
SMG8-201ENST00000300917 HPSE2Q8WWQ2 592 aa12.55□□□□□ -0.4
SMG8-201ENST00000300917 C10orf35Q96D05 121 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms