RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 PGA3P0DJD8 388 aa10.56□□□□□ -0.72
SYNGAP1-201ENST00000293748 IAPPP10997 89 aa10.56□□□□□ -0.72
SYNGAP1-201ENST00000293748 FGF5P12034 268 aa10.56□□□□□ -0.72
SYNGAP1-201ENST00000293748 GABRA1P14867 456 aa10.56□□□□□ -0.72
SYNGAP1-201ENST00000293748 THBS4P35443 961 aa10.56□□□□□ -0.72
SYNGAP1-201ENST00000293748 KCNAB1Q14722 419 aa10.56□□□□□ -0.72
SYNGAP1-201ENST00000293748 PRSS54Q6PEW0 395 aa10.56□□□□□ -0.72
SYNGAP1-201ENST00000293748 FAM24BQ8N5W8 94 aa10.56□□□□□ -0.72
SYNGAP1-201ENST00000293748 BHLHE23Q8NDY6 225 aa10.56□□□□□ -0.72
SYNGAP1-201ENST00000293748 A0A087WUJ7 227 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 CLEC18AA5D8T8 446 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 DUS4LO95620 317 aaKnown RBP10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 CLEC18CQ8NCF0 446 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 ABHD1Q96SE0 405 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 CHRNA10Q9GZZ6 450 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 PPP1R3CQ9UQK1 317 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 A0A0A6YYD5 115 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 TMEM218A2RU14 115 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 OR7C2O60412 319 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 SFT2D2O95562 160 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 GRPP07492 148 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 CSN1S1P47710 185 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 MVDP53602 400 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 HIST1H3AP68431 136 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 PPP1R1AQ13522 171 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 CLEC12BQ2HXU8 276 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 NKAIN1Q4KMZ8 207 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 GGNBP1Q5YKI7 109 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 TOMM20LQ6UXN7 152 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 MORN4Q8NDC4 146 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 OR4C5Q8NGB2 326 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 C4orf45Q96LM5 186 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 TRAF4Q9BUZ4 470 aaPredicted RBP10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 PLAC1Q9HBJ0 212 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 OR5V1Q9UGF6 321 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 ING1Q9UK53 422 aaPredicted RBP10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 ST3GAL6Q9Y274 331 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 MED19A0JLT2 244 aaPredicted RBP10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 ANKRD20A5PA0PJZ0 165 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 C21orf140B9A014 251 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 CTDSPLO15194 276 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 ZFPL1O95159 310 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 ABOP16442 354 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 C9orf62Q8N4C0 152 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 MED29Q9NX70 200 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 EML5Q05BV3 1969 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 FAM221AA4D161 298 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 PRR19A6NJB7 356 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 CST7O76096 145 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 C1QAP02745 245 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 G0S2P27469 103 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 ZNF468Q5VIY5 522 aaPredicted RBP10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 UBE3DQ7Z6J8 389 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 OSR2Q8N2R0 312 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 FAM210BQ96KR6 192 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 MRGPRX4Q96LA9 322 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 CLCF1Q9UBD9 225 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 DUSP13Q9UII6 198 aa10.55□□□□□ -0.72
SYNGAP1-201ENST00000293748 GSTZ1O43708 216 aaPredicted RBP10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 SULT1A3P0DMM9 295 aa10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 SULT1A4P0DMN0 295 aa10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 EDN3P14138 238 aa10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 CD96P40200 585 aa10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 GPR12P47775 334 aa10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 SUMO3P55854 103 aaPredicted RBP10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 PMP22Q01453 160 aa10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 VWA2Q5GFL6 755 aa10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 FAHD2BQ6P2I3 314 aaPredicted RBP10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 OR52N4Q8NGI2 321 aa10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 TMEM37Q8WXS4 190 aa10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 FAHD2AQ96GK7 314 aa10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 FAM173AQ9BQD7 235 aa10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 GPR87Q9BY21 358 aa10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 FBXO34Q9NWN3 711 aa10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 ELOA3CA0A087WX78 387 aaPredicted RBP10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 MASP2O00187 686 aa10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 FCER1GP30273 86 aa10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 EMDP50402 254 aa10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 DEGS2Q6QHC5 323 aa10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 DGAT2L6Q6ZPD8 337 aa10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 SPSB1Q96BD6 273 aa10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 FER1L6-AS2Q96M78 137 aa10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 LINC00052Q96N35 136 aa10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 TECTBQ96PL2 329 aa10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 TWSG1Q9GZX9 223 aa10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 UQCC1Q9NVA1 299 aa10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 A0A0B4J2E0 115 aa10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 A0A1B0GX12 115 aa10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 XKRY2A2RUG3 117 aa10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 AQP7O14520 342 aa10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 ICOSLGO75144 302 aa10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 OR2J2O76002 312 aa10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 SLC25A6P12236 298 aa10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 COTL1Q14019 142 aa10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 FAM53BQ14153 422 aa10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 PLAC9Q5JTB6 97 aa10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 DRAM2Q6UX65 266 aa10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 GINS3Q9BRX5 216 aa10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 V9GYH0 126 aa10.54□□□□□ -0.72
SYNGAP1-201ENST00000293748 C9orf170A2RU37 121 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms