RNA–Protein interactions for RNA: ENST00000283351.8

TRAPPC8-201, Transcript of trafficking protein particle complex 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC8, Length 6,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-201ENST00000283351 B4E171 279 aa13.09□□□□□ -0.31
TRAPPC8-201ENST00000283351 H7BYZ3 331 aa13.09□□□□□ -0.31
TRAPPC8-201ENST00000283351 ARG1P05089 322 aa13.09□□□□□ -0.31
TRAPPC8-201ENST00000283351 LIFP15018 202 aa13.09□□□□□ -0.31
TRAPPC8-201ENST00000283351 TSPAN7P41732 249 aa13.09□□□□□ -0.31
TRAPPC8-201ENST00000283351 KCNJ3P48549 501 aa13.09□□□□□ -0.31
TRAPPC8-201ENST00000283351 SLC35B1P78383 322 aa13.09□□□□□ -0.31
TRAPPC8-201ENST00000283351 MMDQ15546 238 aa13.09□□□□□ -0.31
TRAPPC8-201ENST00000283351 CLEC12BQ2HXU8 276 aa13.09□□□□□ -0.31
TRAPPC8-201ENST00000283351 ZNF486Q96H40 463 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC8-201ENST00000283351 GMPPAQ96IJ6 420 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC8-201ENST00000283351 FAAP24Q9BTP7 215 aa13.09□□□□□ -0.31
TRAPPC8-201ENST00000283351 FKBP11Q9NYL4 201 aa13.09□□□□□ -0.31
TRAPPC8-201ENST00000283351 AMTP48728 403 aa13.09□□□□□ -0.31
TRAPPC8-201ENST00000283351 PAX5Q02548 391 aa13.09□□□□□ -0.31
TRAPPC8-201ENST00000283351 ZNF547Q8IVP9 402 aa13.09□□□□□ -0.31
TRAPPC8-201ENST00000283351 TMPRSS13Q9BYE2 586 aa13.09□□□□□ -0.31
TRAPPC8-201ENST00000283351 SP6Q3SY56 376 aa13.09□□□□□ -0.31
TRAPPC8-201ENST00000283351 SLC25A40Q8TBP6 338 aa13.09□□□□□ -0.31
TRAPPC8-201ENST00000283351 DYNC2LI1Q8TCX1 351 aa13.09□□□□□ -0.31
TRAPPC8-201ENST00000283351 ATP5SQ99766 215 aa13.09□□□□□ -0.31
TRAPPC8-201ENST00000283351 HILPDAQ9Y5L2 63 aa13.09□□□□□ -0.31
TRAPPC8-201ENST00000283351 SCN9AQ15858 1988 aa13.09□□□□□ -0.31
TRAPPC8-201ENST00000283351 ZNF727A8MUV8 499 aa13.09□□□□□ -0.31
TRAPPC8-201ENST00000283351 CST7O76096 145 aa13.09□□□□□ -0.31
TRAPPC8-201ENST00000283351 PF4V1P10720 104 aa13.08□□□□□ -0.31
TRAPPC8-201ENST00000283351 OR1B1Q8NGR6 318 aa13.08□□□□□ -0.31
TRAPPC8-201ENST00000283351 KCNE1BA0A087WTH5 132 aa13.08□□□□□ -0.32
TRAPPC8-201ENST00000283351 MPZL1O95297 269 aa13.08□□□□□ -0.32
TRAPPC8-201ENST00000283351 LOXL3P58215 753 aa13.08□□□□□ -0.32
TRAPPC8-201ENST00000283351 DGAT2L6Q6ZPD8 337 aa13.08□□□□□ -0.32
TRAPPC8-201ENST00000283351 ITPKCQ96DU7 683 aa13.08□□□□□ -0.32
TRAPPC8-201ENST00000283351 P2RX4Q99571 388 aa13.08□□□□□ -0.32
TRAPPC8-201ENST00000283351 RCL1Q9Y2P8 373 aaKnown RBP13.08□□□□□ -0.32
TRAPPC8-201ENST00000283351 ATG2BQ96BY7 2078 aa13.08□□□□□ -0.32
TRAPPC8-201ENST00000283351 PPIAL4EA0A075B759 164 aa13.08□□□□□ -0.32
TRAPPC8-201ENST00000283351 OR5B21A6NL26 309 aa13.08□□□□□ -0.32
TRAPPC8-201ENST00000283351 PPIAL4DF5H284 164 aa13.08□□□□□ -0.32
TRAPPC8-201ENST00000283351 ZNF354AO60765 605 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC8-201ENST00000283351 PPIAL4FP0DN26 164 aa13.08□□□□□ -0.32
TRAPPC8-201ENST00000283351 RPL12P30050 165 aaKnown RBP13.08□□□□□ -0.32
TRAPPC8-201ENST00000283351 PPIAL4AQ9Y536 164 aa13.08□□□□□ -0.32
TRAPPC8-201ENST00000283351 VDAC1P21796 283 aa13.08□□□□□ -0.32
TRAPPC8-201ENST00000283351 HMGN3Q15651 99 aa13.08□□□□□ -0.32
TRAPPC8-201ENST00000283351 UCN2Q96RP3 112 aa13.08□□□□□ -0.32
TRAPPC8-201ENST00000283351 RNF167Q9H6Y7 350 aa13.08□□□□□ -0.32
TRAPPC8-201ENST00000283351 MPC1Q9Y5U8 109 aa13.08□□□□□ -0.32
TRAPPC8-201ENST00000283351 KLK8O60259 260 aa13.08□□□□□ -0.32
TRAPPC8-201ENST00000283351 MDH2P40926 338 aaKnown RBP13.08□□□□□ -0.32
TRAPPC8-201ENST00000283351 CDC34P49427 236 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC8-201ENST00000283351 C19orf57Q0VDD7 668 aa13.08□□□□□ -0.32
TRAPPC8-201ENST00000283351 CD276Q5ZPR3 534 aa13.08□□□□□ -0.32
TRAPPC8-201ENST00000283351 ADAMTS17Q8TE56 1095 aa13.08□□□□□ -0.32
TRAPPC8-201ENST00000283351 ZNF764Q96H86 408 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC8-201ENST00000283351 RAB18Q9NP72 206 aa13.08□□□□□ -0.32
TRAPPC8-201ENST00000283351 UFC1Q9Y3C8 167 aa13.08□□□□□ -0.32
TRAPPC8-201ENST00000283351 SPAG17Q6Q759 2223 aa13.07□□□□□ -0.32
TRAPPC8-201ENST00000283351 A0A1W2PQF6 199 aa13.07□□□□□ -0.32
TRAPPC8-201ENST00000283351 ZNF701M0R085 212 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC8-201ENST00000283351 G0S2P27469 103 aa13.07□□□□□ -0.32
TRAPPC8-201ENST00000283351 SPRED3Q2MJR0 410 aa13.07□□□□□ -0.32
TRAPPC8-201ENST00000283351 TSPAN32Q96QS1 320 aa13.07□□□□□ -0.32
TRAPPC8-201ENST00000283351 A0A1B0GUH1 482 aa13.07□□□□□ -0.32
TRAPPC8-201ENST00000283351 EPOPA6NHQ4 379 aa13.07□□□□□ -0.32
TRAPPC8-201ENST00000283351 ZAR1LA6NP61 321 aa13.07□□□□□ -0.32
TRAPPC8-201ENST00000283351 PLPP3O14495 311 aa13.07□□□□□ -0.32
TRAPPC8-201ENST00000283351 FBXW9Q5XUX1 488 aa13.07□□□□□ -0.32
TRAPPC8-201ENST00000283351 COX14Q96I36 57 aa13.07□□□□□ -0.32
TRAPPC8-201ENST00000283351 SF3B6Q9Y3B4 125 aaKnown RBP13.07□□□□□ -0.32
TRAPPC8-201ENST00000283351 E5RGE8 158 aa13.07□□□□□ -0.32
TRAPPC8-201ENST00000283351 FAM87AP0C7U9 286 aa13.07□□□□□ -0.32
TRAPPC8-201ENST00000283351 REG1BP48304 166 aa13.07□□□□□ -0.32
TRAPPC8-201ENST00000283351 NEIL1Q96FI4 390 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC8-201ENST00000283351 FBXO8Q9NRD0 319 aa13.07□□□□□ -0.32
TRAPPC8-201ENST00000283351 C20orf141Q9NUB4 165 aa13.07□□□□□ -0.32
TRAPPC8-201ENST00000283351 NSG2Q9Y328 171 aa13.07□□□□□ -0.32
TRAPPC8-201ENST00000283351 LSM2Q9Y333 95 aaKnown RBP13.07□□□□□ -0.32
TRAPPC8-201ENST00000283351 IGHV4-34P06331 123 aa13.07□□□□□ -0.32
TRAPPC8-201ENST00000283351 FOSL1P15407 271 aa13.07□□□□□ -0.32
TRAPPC8-201ENST00000283351 S100A11P31949 105 aa13.07□□□□□ -0.32
TRAPPC8-201ENST00000283351 CD80P33681 288 aa13.07□□□□□ -0.32
TRAPPC8-201ENST00000283351 LY6EQ16553 131 aa13.07□□□□□ -0.32
TRAPPC8-201ENST00000283351 VSIG4Q9Y279 399 aa13.07□□□□□ -0.32
TRAPPC8-201ENST00000283351 RAB5CP51148 216 aa13.07□□□□□ -0.32
TRAPPC8-201ENST00000283351 C1QL3Q5VWW1 255 aa13.07□□□□□ -0.32
TRAPPC8-201ENST00000283351 NCCRP1Q6ZVX7 275 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC8-201ENST00000283351 FAM53CQ9NYF3 392 aa13.07□□□□□ -0.32
TRAPPC8-201ENST00000283351 HMX2A2RU54 273 aa13.06□□□□□ -0.32
TRAPPC8-201ENST00000283351 COL19A1Q14993 1142 aa13.06□□□□□ -0.32
TRAPPC8-201ENST00000283351 OXA1LQ15070 435 aa13.06□□□□□ -0.32
TRAPPC8-201ENST00000283351 C6orf201Q7Z4U5 140 aa13.06□□□□□ -0.32
TRAPPC8-201ENST00000283351 SLC25A19Q9HC21 320 aa13.06□□□□□ -0.32
TRAPPC8-201ENST00000283351 A0A1B0GTL3 188 aa13.06□□□□□ -0.32
TRAPPC8-201ENST00000283351 PPP5D1E7EU14 171 aa13.06□□□□□ -0.32
TRAPPC8-201ENST00000283351 TSTD3H0UI37 97 aa13.06□□□□□ -0.32
TRAPPC8-201ENST00000283351 PXT1Q8NFP0 134 aa13.06□□□□□ -0.32
TRAPPC8-201ENST00000283351 DCTN5Q9BTE1 182 aa13.06□□□□□ -0.32
TRAPPC8-201ENST00000283351 WDR61Q9GZS3 305 aaKnown RBP13.06□□□□□ -0.32
TRAPPC8-201ENST00000283351 WDR54Q9H977 334 aa13.06□□□□□ -0.32
TRAPPC8-201ENST00000283351 SLC51BQ86UW2 128 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms