RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 SOX8P57073 446 aa10.19□□□□□ -0.78
USP53-201ENST00000274030 FOXL2P58012 376 aa10.19□□□□□ -0.78
USP53-201ENST00000274030 TRA2AQ13595 282 aaKnown RBP eCLIP10.19□□□□□ -0.78
USP53-201ENST00000274030 VMA21Q3ZAQ7 101 aa10.19□□□□□ -0.78
USP53-201ENST00000274030 TEX261Q6UWH6 196 aa10.19□□□□□ -0.78
USP53-201ENST00000274030 OR13G1Q8NGZ3 307 aa10.19□□□□□ -0.78
USP53-201ENST00000274030 CMTM3Q96MX0 182 aa10.19□□□□□ -0.78
USP53-201ENST00000274030 U3KQ87 197 aa10.19□□□□□ -0.78
USP53-201ENST00000274030 TRPM3Q9HCF6 1732 aaPredicted RBP10.19□□□□□ -0.78
USP53-201ENST00000274030 RAB32Q13637 225 aa10.19□□□□□ -0.78
USP53-201ENST00000274030 RPEQ96AT9 228 aa10.19□□□□□ -0.78
USP53-201ENST00000274030 DUS4LO95620 317 aaKnown RBP10.19□□□□□ -0.78
USP53-201ENST00000274030 CLEC9AQ6UXN8 241 aa10.19□□□□□ -0.78
USP53-201ENST00000274030 DGAT2L6Q6ZPD8 337 aa10.19□□□□□ -0.78
USP53-201ENST00000274030 ZNF275Q9NSD4 429 aaPredicted RBP10.19□□□□□ -0.78
USP53-201ENST00000274030 GAR1Q9NY12 217 aaKnown RBP10.19□□□□□ -0.78
USP53-201ENST00000274030 DOK5Q9P104 306 aa10.19□□□□□ -0.78
USP53-201ENST00000274030 CNN1P51911 297 aaKnown RBP10.18□□□□□ -0.78
USP53-201ENST00000274030 FAM3AP98173 230 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 SSBP1Q04837 148 aaKnown RBP10.18□□□□□ -0.78
USP53-201ENST00000274030 FFAR4Q5NUL3 377 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 DHRS7BQ6IAN0 325 aaPredicted RBP10.18□□□□□ -0.78
USP53-201ENST00000274030 OR4D9Q8NGE8 314 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 OR2D2Q9H210 308 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 LHX9Q9NQ69 397 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 SCN3AQ9NY46 2000 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 FAM24AA6NFZ4 105 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 LINC01387J3KSC0 135 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 M0QZ24 198 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 SPRED2Q7Z698 418 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 OR5C1Q8NGR4 320 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 DHRS9Q9BPW9 319 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 ZNF586Q9NXT0 402 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 GOLT1BQ9Y3E0 138 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 SFTA3P0C7M3 94 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 OR3A1P47881 315 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 PPP1CBP62140 327 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 TNFAIP6P98066 277 aaPredicted RBP10.18□□□□□ -0.78
USP53-201ENST00000274030 BTNL3Q6UXE8 466 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 CT55Q8WUE5 264 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 PCED1AQ9H1Q7 454 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 MTFP1Q9UDX5 166 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 LOC102723971A0A1B0GUV8 181 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 XKRY2A2RUG3 117 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 OR2M5A3KFT3 312 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 RNASEK-C17orf49H0YIS7 233 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 TBX19O60806 448 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 CALCRP30988 508 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 HFEQ30201 348 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 OR4D11Q8NGI4 311 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 WDR34Q96EX3 536 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 UQCC1Q9NVA1 299 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 RASL12Q9NYN1 266 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 CACNG5Q9UF02 275 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 CXorf51AA0A1B0GTR3 108 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 PATE3B3GLJ2 98 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 EIF3IQ13347 325 aaKnown RBP10.18□□□□□ -0.78
USP53-201ENST00000274030 TSPO2Q5TGU0 170 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 SPNS3Q6ZMD2 512 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 SFTPA2Q8IWL1 248 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 OR6S1Q8NH40 331 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 BLNKQ8WV28 456 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 RASL10BQ96S79 203 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 UQCC2Q9BRT2 126 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 LAMB1P07942 1786 aa10.18□□□□□ -0.78
USP53-201ENST00000274030 GOSR1O95249 250 aa10.17□□□□□ -0.78
USP53-201ENST00000274030 OR5AC1P0C628 307 aa10.17□□□□□ -0.78
USP53-201ENST00000274030 PNLIPP16233 465 aa10.17□□□□□ -0.78
USP53-201ENST00000274030 ZAR1Q86SH2 424 aa10.17□□□□□ -0.78
USP53-201ENST00000274030 Q8IYB0 196 aa10.17□□□□□ -0.78
USP53-201ENST00000274030 ABHD1Q96SE0 405 aa10.17□□□□□ -0.78
USP53-201ENST00000274030 IGHA2P01877 340 aa10.17□□□□□ -0.78
USP53-201ENST00000274030 ACSM4P0C7M7 580 aa10.17□□□□□ -0.78
USP53-201ENST00000274030 GUK1Q16774 197 aa10.17□□□□□ -0.78
USP53-201ENST00000274030 ZBTB37Q5TC79 503 aa10.17□□□□□ -0.78
USP53-201ENST00000274030 ZNF429Q86V71 674 aa10.17□□□□□ -0.78
USP53-201ENST00000274030 OR1L4Q8NGR5 311 aa10.17□□□□□ -0.78
USP53-201ENST00000274030 TM4SF19Q96DZ7 209 aa10.17□□□□□ -0.78
USP53-201ENST00000274030 IL36GQ9NZH8 169 aa10.17□□□□□ -0.78
USP53-201ENST00000274030 EXOGQ9Y2C4 368 aaKnown RBP10.17□□□□□ -0.78
USP53-201ENST00000274030 TRPM6Q9BX84 2022 aa10.17□□□□□ -0.78
USP53-201ENST00000274030 C3orf85A0A1B0GTC6 90 aa10.17□□□□□ -0.78
USP53-201ENST00000274030 NQO2P16083 231 aa10.17□□□□□ -0.78
USP53-201ENST00000274030 TCTE3Q8IZS6 198 aa10.17□□□□□ -0.78
USP53-201ENST00000274030 OR8B12Q8NGG6 310 aa10.17□□□□□ -0.78
USP53-201ENST00000274030 GABRG3Q99928 467 aa10.17□□□□□ -0.78
USP53-201ENST00000274030 RAB18Q9NP72 206 aa10.17□□□□□ -0.78
USP53-201ENST00000274030 MYOZ1Q9NP98 299 aaPredicted RBP10.17□□□□□ -0.78
USP53-201ENST00000274030 FLRT3Q9NZU0 649 aa10.17□□□□□ -0.78
USP53-201ENST00000274030 OR1A1Q9P1Q5 309 aa10.17□□□□□ -0.78
USP53-201ENST00000274030 MRM2Q9UI43 246 aaKnown RBP10.17□□□□□ -0.78
USP53-201ENST00000274030 CYC1P08574 325 aa10.17□□□□□ -0.78
USP53-201ENST00000274030 ZNF141Q15928 474 aa10.17□□□□□ -0.78
USP53-201ENST00000274030 RHBDD2Q6NTF9 364 aa10.17□□□□□ -0.78
USP53-201ENST00000274030 SLC24A4Q8NFF2 622 aa10.17□□□□□ -0.78
USP53-201ENST00000274030 TMEM37Q8WXS4 190 aa10.17□□□□□ -0.78
USP53-201ENST00000274030 WDR13Q9H1Z4 485 aa10.17□□□□□ -0.78
USP53-201ENST00000274030 MMP24Q9Y5R2 645 aa10.17□□□□□ -0.78
USP53-201ENST00000274030 TJP1Q07157 1748 aa10.17□□□□□ -0.78
USP53-201ENST00000274030 SRD5A2P31213 254 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms