RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 OBP2AQ9NY56 170 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 ATG2AQ2TAZ0 1938 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 PCNX3Q9H6A9 2034 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 TMEM212A6NML5 194 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 M0QZ24 198 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 CELA2BP08218 269 aaPredicted RBP7.72□□□□□ -1.17
VAPB-201ENST00000265619 ALOX5APP20292 161 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 RPS4Y1P22090 263 aaKnown RBP7.72□□□□□ -1.17
VAPB-201ENST00000265619 CFPP27918 469 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 ULK3Q6PHR2 472 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 OPN5Q6U736 354 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 MRPL41Q8IXM3 137 aaKnown RBP7.72□□□□□ -1.17
VAPB-201ENST00000265619 CMTM1Q8IZ96 169 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 NOXO1Q8NFA2 376 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 ADOQ96SZ5 270 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 PBDC1Q9BVG4 233 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 HDAC8Q9BY41 377 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 OR2J1Q9GZK6 312 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 SLCO5A1Q9H2Y9 848 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 CNTD2Q9H8S5 307 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 ELOVL3Q9HB03 270 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 PLA2G3Q9NZ20 509 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 RNF150Q9ULK6 438 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 A0A1W2PP11 408 aa7.71□□□□□ -1.17
VAPB-201ENST00000265619 A8MXE2 369 aa7.71□□□□□ -1.17
VAPB-201ENST00000265619 GPR89AB7ZAQ6 455 aa7.71□□□□□ -1.17
VAPB-201ENST00000265619 ETV2O00321 342 aaPredicted RBP7.71□□□□□ -1.17
VAPB-201ENST00000265619 SEMA4FO95754 770 aa7.71□□□□□ -1.17
VAPB-201ENST00000265619 IGHEP01854 428 aa7.71□□□□□ -1.17
VAPB-201ENST00000265619 SEC11BP0C7V7 166 aa7.71□□□□□ -1.17
VAPB-201ENST00000265619 GPR89BP0CG08 455 aa7.71□□□□□ -1.17
VAPB-201ENST00000265619 GABRG2P18507 467 aa7.71□□□□□ -1.17
VAPB-201ENST00000265619 GABRR1P24046 479 aa7.71□□□□□ -1.17
VAPB-201ENST00000265619 EXOSC7Q15024 291 aaKnown RBP7.71□□□□□ -1.17
VAPB-201ENST00000265619 MEP1BQ16820 701 aa7.71□□□□□ -1.17
VAPB-201ENST00000265619 KRTCAP3Q53RY4 240 aa7.71□□□□□ -1.17
VAPB-201ENST00000265619 Q6ZSR6 202 aa7.71□□□□□ -1.17
VAPB-201ENST00000265619 C1orf87Q8N0U7 546 aa7.71□□□□□ -1.17
VAPB-201ENST00000265619 LYG1Q8N1E2 194 aa7.71□□□□□ -1.17
VAPB-201ENST00000265619 TMEM37Q8WXS4 190 aa7.71□□□□□ -1.17
VAPB-201ENST00000265619 SDSLQ96GA7 329 aa7.71□□□□□ -1.17
VAPB-201ENST00000265619 SLC25A44Q96H78 314 aaPredicted RBP7.71□□□□□ -1.17
VAPB-201ENST00000265619 ZNF764Q96H86 408 aaPredicted RBP7.71□□□□□ -1.17
VAPB-201ENST00000265619 APOBEC3BQ9UH17 382 aaKnown RBP7.71□□□□□ -1.17
VAPB-201ENST00000265619 OR52A1Q9UKL2 312 aa7.71□□□□□ -1.17
VAPB-201ENST00000265619 CNOT1A5YKK6 2376 aaKnown RBP7.71□□□□□ -1.17
VAPB-201ENST00000265619 AQP7O14520 342 aa7.71□□□□□ -1.18
VAPB-201ENST00000265619 GSTP1P09211 210 aaKnown RBP7.71□□□□□ -1.18
VAPB-201ENST00000265619 PVRP15151 417 aa7.71□□□□□ -1.18
VAPB-201ENST00000265619 TMEM52BQ4KMG9 183 aa7.71□□□□□ -1.18
VAPB-201ENST00000265619 ABHD17CQ6PCB6 329 aa7.71□□□□□ -1.18
VAPB-201ENST00000265619 ZNF100Q8IYN0 542 aa7.71□□□□□ -1.18
VAPB-201ENST00000265619 OR13H1Q8NG92 308 aa7.71□□□□□ -1.18
VAPB-201ENST00000265619 OR4N2Q8NGD1 307 aa7.71□□□□□ -1.18
VAPB-201ENST00000265619 OR52E1Q8NGJ3 308 aa7.71□□□□□ -1.18
VAPB-201ENST00000265619 EXTL1Q92935 676 aa7.71□□□□□ -1.18
VAPB-201ENST00000265619 TBC1D29Q9UFV1 150 aa7.71□□□□□ -1.18
VAPB-201ENST00000265619 BDP1A6H8Y1 2624 aa7.71□□□□□ -1.18
VAPB-201ENST00000265619 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.71□□□□□ -1.18
VAPB-201ENST00000265619 OPN1MWP04001 364 aa7.71□□□□□ -1.18
VAPB-201ENST00000265619 OPN1MW2P0DN77 364 aa7.71□□□□□ -1.18
VAPB-201ENST00000265619 OPN1MW3P0DN78 364 aa7.71□□□□□ -1.18
VAPB-201ENST00000265619 IGFBP3P17936 291 aaPredicted RBP7.71□□□□□ -1.18
VAPB-201ENST00000265619 ERVS71-1P61550 626 aa7.71□□□□□ -1.18
VAPB-201ENST00000265619 TMEM123Q8N131 208 aa7.71□□□□□ -1.18
VAPB-201ENST00000265619 ZNF524Q96C55 264 aa7.71□□□□□ -1.18
VAPB-201ENST00000265619 KLHDC3Q9BQ90 382 aa7.71□□□□□ -1.18
VAPB-201ENST00000265619 WSB1Q9Y6I7 421 aa7.71□□□□□ -1.18
VAPB-201ENST00000265619 RIF1Q5UIP0 2472 aaKnown RBP7.7□□□□□ -1.18
VAPB-201ENST00000265619 LOC105371242A0A075B767 164 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 PRSS38A1L453 326 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 SLC25A17O43808 307 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 GMFGO60234 142 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 NSA2O95478 260 aaKnown RBP7.7□□□□□ -1.18
VAPB-201ENST00000265619 CEACAM5P06731 702 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 CTSBP07858 339 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 MYF5P13349 255 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 TUBG1P23258 451 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 CDKN1BP46527 198 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 RAB7AP51149 207 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 NOVA1P51513 510 aaKnown RBP7.7□□□□□ -1.18
VAPB-201ENST00000265619 DEFB110Q30KQ9 67 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 PLAC9Q5JTB6 97 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 CALHM1Q8IU99 346 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 DEFB123Q8N688 67 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 ZNF283Q8N7M2 679 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 HLA-CQ95604 372 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 OR8D2Q9GZM6 311 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 CALHM2Q9HA72 323 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 B3GAT1Q9P2W7 334 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 PRKNO60260 465 aaPredicted RBP7.7□□□□□ -1.18
VAPB-201ENST00000265619 DRD1P21728 446 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 BCKDHBP21953 392 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 C17orf67Q0P5P2 114 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 FZD2Q14332 565 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 SP6Q3SY56 376 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 EIPR1Q53HC9 387 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 PHF19Q5T6S3 580 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 LYPD6Q86Y78 171 aa7.7□□□□□ -1.18
VAPB-201ENST00000265619 TMEM256Q8N2U0 113 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms