RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 ROBO4Q8WZ75 1007 aa15.65■□□□□ 0.1
NOTCH3-201ENST00000263388 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.65■□□□□ 0.1
NOTCH3-201ENST00000263388 PTGFRP43088 359 aa15.65■□□□□ 0.1
NOTCH3-201ENST00000263388 HERVK_113P61574 105 aa15.65■□□□□ 0.1
NOTCH3-201ENST00000263388 C12orf73Q69YU5 71 aa15.65■□□□□ 0.1
NOTCH3-201ENST00000263388 IGHV3-64DA0A0J9YX35 117 aa15.65■□□□□ 0.1
NOTCH3-201ENST00000263388 MRPL58Q14197 206 aaKnown RBP15.65■□□□□ 0.1
NOTCH3-201ENST00000263388 STUMQ69YW2 141 aa15.65■□□□□ 0.1
NOTCH3-201ENST00000263388 MOB3AQ96BX8 217 aa15.65■□□□□ 0.1
NOTCH3-201ENST00000263388 SEC11CQ9BY50 192 aa15.65■□□□□ 0.1
NOTCH3-201ENST00000263388 TMEM272A0A1B0GTI8 110 aa15.65■□□□□ 0.1
NOTCH3-201ENST00000263388 KRASP01116 189 aa15.65■□□□□ 0.1
NOTCH3-201ENST00000263388 SEMG1P04279 462 aa15.65■□□□□ 0.1
NOTCH3-201ENST00000263388 GSG1Q2KHT4 349 aa15.65■□□□□ 0.1
NOTCH3-201ENST00000263388 HES7Q9BYE0 225 aa15.65■□□□□ 0.1
NOTCH3-201ENST00000263388 A0A0B4J2E0 115 aa15.65■□□□□ 0.1
NOTCH3-201ENST00000263388 A0A1B0GX12 115 aa15.65■□□□□ 0.1
NOTCH3-201ENST00000263388 HLXQ14774 488 aaPredicted RBP15.65■□□□□ 0.1
NOTCH3-201ENST00000263388 UQCC1Q9NVA1 299 aa15.65■□□□□ 0.1
NOTCH3-201ENST00000263388 CDAP32320 146 aa15.64■□□□□ 0.09
NOTCH3-201ENST00000263388 DEFB108BQ8NET1 73 aa15.64■□□□□ 0.09
NOTCH3-201ENST00000263388 SLC26A10Q8NG04 563 aa15.64■□□□□ 0.09
NOTCH3-201ENST00000263388 CNRIP1Q96F85 164 aaPredicted RBP15.64■□□□□ 0.09
NOTCH3-201ENST00000263388 KCNK15Q9H427 330 aa15.64■□□□□ 0.09
NOTCH3-201ENST00000263388 SIGLEC7Q9Y286 467 aa15.64■□□□□ 0.09
NOTCH3-201ENST00000263388 PTHLHP12272 177 aa15.64■□□□□ 0.09
NOTCH3-201ENST00000263388 MS4A10Q96PG2 267 aa15.64■□□□□ 0.09
NOTCH3-201ENST00000263388 ZNF785A8K8V0 405 aa15.64■□□□□ 0.09
NOTCH3-201ENST00000263388 MYOGP15173 224 aa15.64■□□□□ 0.09
NOTCH3-201ENST00000263388 MAP1LC3CQ9BXW4 147 aa15.64■□□□□ 0.09
NOTCH3-201ENST00000263388 OPRK1P41145 380 aa15.64■□□□□ 0.09
NOTCH3-201ENST00000263388 TMEM267Q0VDI3 215 aaPredicted RBP15.64■□□□□ 0.09
NOTCH3-201ENST00000263388 TMEM147Q9BVK8 224 aa15.64■□□□□ 0.09
NOTCH3-201ENST00000263388 OR1A1Q9P1Q5 309 aa15.64■□□□□ 0.09
NOTCH3-201ENST00000263388 H3BP45 60 aa15.64■□□□□ 0.09
NOTCH3-201ENST00000263388 CRYABP02511 175 aaKnown RBP15.64■□□□□ 0.09
NOTCH3-201ENST00000263388 IL11RAQ14626 422 aa15.64■□□□□ 0.09
NOTCH3-201ENST00000263388 SIRT3Q9NTG7 399 aaPredicted RBP15.64■□□□□ 0.09
NOTCH3-201ENST00000263388 HMSDA8MTL9 139 aa15.64■□□□□ 0.09
NOTCH3-201ENST00000263388 FXYD1O00168 92 aa15.64■□□□□ 0.09
NOTCH3-201ENST00000263388 SPNP16150 400 aa15.64■□□□□ 0.09
NOTCH3-201ENST00000263388 BMP5P22003 454 aa15.64■□□□□ 0.09
NOTCH3-201ENST00000263388 Q6ZN92 141 aa15.64■□□□□ 0.09
NOTCH3-201ENST00000263388 OR2Z1Q8NG97 314 aa15.64■□□□□ 0.09
NOTCH3-201ENST00000263388 NQO2P16083 231 aa15.64■□□□□ 0.09
NOTCH3-201ENST00000263388 ANKRD34AQ69YU3 496 aa15.64■□□□□ 0.09
NOTCH3-201ENST00000263388 LOXL2Q9Y4K0 774 aa15.64■□□□□ 0.09
NOTCH3-201ENST00000263388 SPRY1O43609 319 aaPredicted RBP15.63■□□□□ 0.09
NOTCH3-201ENST00000263388 PRSS3P2Q8NHM4 247 aa15.63■□□□□ 0.09
NOTCH3-201ENST00000263388 PECRQ9BY49 303 aa15.63■□□□□ 0.09
NOTCH3-201ENST00000263388 VMA21Q3ZAQ7 101 aa15.63■□□□□ 0.09
NOTCH3-201ENST00000263388 CCL4L1Q8NHW4 92 aa15.63■□□□□ 0.09
NOTCH3-201ENST00000263388 MTFP1Q9UDX5 166 aa15.63■□□□□ 0.09
NOTCH3-201ENST00000263388 A0A1W2PPC4 97 aa15.63■□□□□ 0.09
NOTCH3-201ENST00000263388 CEACAM6P40199 344 aa15.63■□□□□ 0.09
NOTCH3-201ENST00000263388 EXTL1Q92935 676 aa15.63■□□□□ 0.09
NOTCH3-201ENST00000263388 NPAS1Q99742 590 aa15.63■□□□□ 0.09
NOTCH3-201ENST00000263388 TINAGL1Q9GZM7 467 aaPredicted RBP15.63■□□□□ 0.09
NOTCH3-201ENST00000263388 WSB2Q9NYS7 404 aaPredicted RBP15.63■□□□□ 0.09
NOTCH3-201ENST00000263388 C9orf170A2RU37 121 aa15.63■□□□□ 0.09
NOTCH3-201ENST00000263388 ADAT1Q9BUB4 502 aaKnown RBP15.63■□□□□ 0.09
NOTCH3-201ENST00000263388 MANBALQ9NQG1 85 aa15.63■□□□□ 0.09
NOTCH3-201ENST00000263388 HSPB8Q9UJY1 196 aa15.63■□□□□ 0.09
NOTCH3-201ENST00000263388 MKRN2OSH3BPM6 223 aa15.63■□□□□ 0.09
NOTCH3-201ENST00000263388 CSF2RBP32927 897 aa15.63■□□□□ 0.09
NOTCH3-201ENST00000263388 MICBQ29980 383 aa15.63■□□□□ 0.09
NOTCH3-201ENST00000263388 SPOCK3Q9BQ16 436 aa15.63■□□□□ 0.09
NOTCH3-201ENST00000263388 MARVELD1Q9BSK0 173 aa15.63■□□□□ 0.09
NOTCH3-201ENST00000263388 TMEM9BQ9NQ34 198 aa15.63■□□□□ 0.09
NOTCH3-201ENST00000263388 FCN1O00602 326 aa15.63■□□□□ 0.09
NOTCH3-201ENST00000263388 RPS27P42677 84 aaKnown RBP15.63■□□□□ 0.09
NOTCH3-201ENST00000263388 PMP22Q01453 160 aa15.63■□□□□ 0.09
NOTCH3-201ENST00000263388 GUCA2AQ02747 115 aa15.63■□□□□ 0.09
NOTCH3-201ENST00000263388 TMEM241Q24JQ0 296 aa15.63■□□□□ 0.09
NOTCH3-201ENST00000263388 TMEM215Q68D42 235 aa15.63■□□□□ 0.09
NOTCH3-201ENST00000263388 VASH2Q86V25 355 aa15.63■□□□□ 0.09
NOTCH3-201ENST00000263388 OR4F17Q8NGA8 305 aa15.63■□□□□ 0.09
NOTCH3-201ENST00000263388 OR5C1Q8NGR4 320 aa15.63■□□□□ 0.09
NOTCH3-201ENST00000263388 KTI12Q96EK9 354 aaPredicted RBP15.63■□□□□ 0.09
NOTCH3-201ENST00000263388 CXCL13O43927 109 aa15.62■□□□□ 0.09
NOTCH3-201ENST00000263388 ARHGAP5-AS1Q96IT6 56 aa15.62■□□□□ 0.09
NOTCH3-201ENST00000263388 A0A1W2PN81 502 aa15.62■□□□□ 0.09
NOTCH3-201ENST00000263388 DEDDO75618 318 aa15.62■□□□□ 0.09
NOTCH3-201ENST00000263388 CEACAM5P06731 702 aa15.62■□□□□ 0.09
NOTCH3-201ENST00000263388 CHRNA7P36544 502 aa15.62■□□□□ 0.09
NOTCH3-201ENST00000263388 DEGS2Q6QHC5 323 aa15.62■□□□□ 0.09
NOTCH3-201ENST00000263388 RSPO2Q6UXX9 243 aaPredicted RBP15.62■□□□□ 0.09
NOTCH3-201ENST00000263388 RTN4RL1Q86UN2 441 aaPredicted RBP15.62■□□□□ 0.09
NOTCH3-201ENST00000263388 PLSCR3Q9NRY6 295 aa15.62■□□□□ 0.09
NOTCH3-201ENST00000263388 ACACAQ13085 2346 aa15.62■□□□□ 0.09
NOTCH3-201ENST00000263388 HIST1H1DP16402 221 aaKnown RBP15.62■□□□□ 0.09
NOTCH3-201ENST00000263388 HTR1DP28221 377 aa15.62■□□□□ 0.09
NOTCH3-201ENST00000263388 UBALD1Q8TB05 177 aa15.62■□□□□ 0.09
NOTCH3-201ENST00000263388 ATP5SQ99766 215 aa15.62■□□□□ 0.09
NOTCH3-201ENST00000263388 RASL12Q9NYN1 266 aa15.62■□□□□ 0.09
NOTCH3-201ENST00000263388 CRISP2P16562 243 aa15.62■□□□□ 0.09
NOTCH3-201ENST00000263388 LRP11Q86VZ4 500 aa15.62■□□□□ 0.09
NOTCH3-201ENST00000263388 HELZP42694 1942 aaKnown RBP15.62■□□□□ 0.09
NOTCH3-201ENST00000263388 TNFSF15O95150 251 aa15.62■□□□□ 0.09
NOTCH3-201ENST00000263388 PRDX4Q13162 271 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms