RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 FABP4P15090 132 aa10.76□□□□□ -0.69
COL8A1-201ENST00000261037 TRA2AQ13595 282 aaKnown RBP eCLIP10.76□□□□□ -0.69
COL8A1-201ENST00000261037 CBLN3Q6UW01 205 aa10.76□□□□□ -0.69
COL8A1-201ENST00000261037 LIMS2Q7Z4I7 341 aa10.76□□□□□ -0.69
COL8A1-201ENST00000261037 GVQW1Q8N7I0 195 aa10.76□□□□□ -0.69
COL8A1-201ENST00000261037 C4orf45Q96LM5 186 aa10.76□□□□□ -0.69
COL8A1-201ENST00000261037 FAM60AQ9NP50 221 aa10.76□□□□□ -0.69
COL8A1-201ENST00000261037 POMT1Q9Y6A1 747 aa10.76□□□□□ -0.69
COL8A1-201ENST00000261037 RNASEK-C17orf49H0YIS7 233 aa10.75□□□□□ -0.69
COL8A1-201ENST00000261037 ACSM4P0C7M7 580 aa10.75□□□□□ -0.69
COL8A1-201ENST00000261037 SRP14P37108 136 aaKnown RBP10.75□□□□□ -0.69
COL8A1-201ENST00000261037 DGAT2L6Q6ZPD8 337 aa10.75□□□□□ -0.69
COL8A1-201ENST00000261037 Q8IYB0 196 aa10.75□□□□□ -0.69
COL8A1-201ENST00000261037 OR1L4Q8NGR5 311 aa10.75□□□□□ -0.69
COL8A1-201ENST00000261037 NXF2Q9GZY0 626 aaKnown RBP10.75□□□□□ -0.69
COL8A1-201ENST00000261037 UCK1Q9HA47 277 aa10.75□□□□□ -0.69
COL8A1-201ENST00000261037 EXOGQ9Y2C4 368 aaKnown RBP10.75□□□□□ -0.69
COL8A1-201ENST00000261037 FAM24AA6NFZ4 105 aa10.75□□□□□ -0.69
COL8A1-201ENST00000261037 F5H697 171 aa10.75□□□□□ -0.69
COL8A1-201ENST00000261037 CTAG2O75638 210 aa10.75□□□□□ -0.69
COL8A1-201ENST00000261037 ZFPL1O95159 310 aa10.75□□□□□ -0.69
COL8A1-201ENST00000261037 TMIGD3P0DMS9 266 aaPredicted RBP10.75□□□□□ -0.69
COL8A1-201ENST00000261037 EPHA8P29322 1005 aaPredicted RBP10.75□□□□□ -0.69
COL8A1-201ENST00000261037 OR2W3Q7Z3T1 314 aa10.75□□□□□ -0.69
COL8A1-201ENST00000261037 CCDC190Q86UF4 302 aa10.75□□□□□ -0.69
COL8A1-201ENST00000261037 BCL2L2Q92843 193 aaPredicted RBP10.75□□□□□ -0.69
COL8A1-201ENST00000261037 TMEM56Q96MV1 263 aa10.75□□□□□ -0.69
COL8A1-201ENST00000261037 OR1A1Q9P1Q5 309 aa10.75□□□□□ -0.69
COL8A1-201ENST00000261037 NQO2P16083 231 aa10.75□□□□□ -0.69
COL8A1-201ENST00000261037 KLF3P57682 345 aaPredicted RBP10.75□□□□□ -0.69
COL8A1-201ENST00000261037 NHLRC1Q6VVB1 395 aa10.75□□□□□ -0.69
COL8A1-201ENST00000261037 C17orf47Q8NEP4 570 aa10.75□□□□□ -0.69
COL8A1-201ENST00000261037 ZNF707Q96C28 371 aaPredicted RBP10.75□□□□□ -0.69
COL8A1-201ENST00000261037 EID2BQ96D98 161 aa10.75□□□□□ -0.69
COL8A1-201ENST00000261037 UQCC1Q9NVA1 299 aa10.75□□□□□ -0.69
COL8A1-201ENST00000261037 WNT16Q9UBV4 365 aa10.75□□□□□ -0.69
COL8A1-201ENST00000261037 OR5V1Q9UGF6 321 aa10.75□□□□□ -0.69
COL8A1-201ENST00000261037 CYR61O00622 381 aa10.75□□□□□ -0.69
COL8A1-201ENST00000261037 NXPH1P58417 271 aa10.75□□□□□ -0.69
COL8A1-201ENST00000261037 TEX261Q6UWH6 196 aa10.75□□□□□ -0.69
COL8A1-201ENST00000261037 THSD4Q6ZMP0 1018 aa10.75□□□□□ -0.69
COL8A1-201ENST00000261037 FA2HQ7L5A8 372 aa10.75□□□□□ -0.69
COL8A1-201ENST00000261037 HSD17B10Q99714 261 aaKnown RBP10.75□□□□□ -0.69
COL8A1-201ENST00000261037 PRRX2Q99811 253 aa10.75□□□□□ -0.69
COL8A1-201ENST00000261037 U3KQ87 197 aa10.75□□□□□ -0.69
COL8A1-201ENST00000261037 B3GALNT1O75752 331 aa10.75□□□□□ -0.69
COL8A1-201ENST00000261037 SFT2D2O95562 160 aa10.75□□□□□ -0.69
COL8A1-201ENST00000261037 AMTP48728 403 aa10.75□□□□□ -0.69
COL8A1-201ENST00000261037 MUC20Q8N307 709 aaPredicted RBP10.75□□□□□ -0.69
COL8A1-201ENST00000261037 OR4F17Q8NGA8 305 aa10.75□□□□□ -0.69
COL8A1-201ENST00000261037 OR4D9Q8NGE8 314 aa10.75□□□□□ -0.69
COL8A1-201ENST00000261037 ASB10Q8WXI3 467 aa10.75□□□□□ -0.69
COL8A1-201ENST00000261037 UBTD1Q9HAC8 227 aa10.75□□□□□ -0.69
COL8A1-201ENST00000261037 IGLV3-16A0A075B6K0 115 aa10.74□□□□□ -0.69
COL8A1-201ENST00000261037 LINC01387J3KSC0 135 aa10.74□□□□□ -0.69
COL8A1-201ENST00000261037 K7EQS6 105 aa10.74□□□□□ -0.69
COL8A1-201ENST00000261037 OR5AC1P0C628 307 aa10.74□□□□□ -0.69
COL8A1-201ENST00000261037 LYZP61626 148 aa10.74□□□□□ -0.69
COL8A1-201ENST00000261037 TIAL1Q01085 375 aaKnown RBP eCLIP10.74□□□□□ -0.69
COL8A1-201ENST00000261037 FNDC7Q5VTL7 733 aa10.74□□□□□ -0.69
COL8A1-201ENST00000261037 LYPD8Q6UX82 237 aa10.74□□□□□ -0.69
COL8A1-201ENST00000261037 BHLHA15Q7RTS1 189 aaPredicted RBP10.74□□□□□ -0.69
COL8A1-201ENST00000261037 BHLHA9Q7RTU4 235 aa10.74□□□□□ -0.69
COL8A1-201ENST00000261037 OR5C1Q8NGR4 320 aa10.74□□□□□ -0.69
COL8A1-201ENST00000261037 CXorf58Q96LI9 332 aa10.74□□□□□ -0.69
COL8A1-201ENST00000261037 ABHD14AQ9BUJ0 271 aa10.74□□□□□ -0.69
COL8A1-201ENST00000261037 ZNF385DQ9H6B1 395 aa10.74□□□□□ -0.69
COL8A1-201ENST00000261037 SLC25A22Q9H936 323 aa10.74□□□□□ -0.69
COL8A1-201ENST00000261037 ZFP64Q9NPA5 681 aa10.74□□□□□ -0.69
COL8A1-201ENST00000261037 ZMIZ1Q9ULJ6 1067 aa10.74□□□□□ -0.69
COL8A1-201ENST00000261037 A0A1W2PNV4 684 aa10.74□□□□□ -0.69
COL8A1-201ENST00000261037 MAGEA5P43359 124 aa10.74□□□□□ -0.69
COL8A1-201ENST00000261037 OR3A1P47881 315 aa10.74□□□□□ -0.69
COL8A1-201ENST00000261037 ZNF547Q8IVP9 402 aa10.74□□□□□ -0.69
COL8A1-201ENST00000261037 CACNG5Q9UF02 275 aa10.74□□□□□ -0.69
COL8A1-201ENST00000261037 LY75O60449 1722 aa10.74□□□□□ -0.69
COL8A1-201ENST00000261037 C9orf170A2RU37 121 aa10.74□□□□□ -0.69
COL8A1-201ENST00000261037 CTLA4P16410 223 aa10.74□□□□□ -0.69
COL8A1-201ENST00000261037 BCL3P20749 454 aa10.74□□□□□ -0.69
COL8A1-201ENST00000261037 CSF2RBP32927 897 aa10.74□□□□□ -0.69
COL8A1-201ENST00000261037 GALR1P47211 349 aa10.74□□□□□ -0.69
COL8A1-201ENST00000261037 KIAA0040Q15053 153 aa10.74□□□□□ -0.69
COL8A1-201ENST00000261037 OR13G1Q8NGZ3 307 aa10.74□□□□□ -0.69
COL8A1-201ENST00000261037 WBP1LQ9NX94 342 aa10.74□□□□□ -0.69
COL8A1-201ENST00000261037 J3KRW8 73 aa10.74□□□□□ -0.69
COL8A1-201ENST00000261037 DNASE2O00115 360 aaPredicted RBP10.74□□□□□ -0.69
COL8A1-201ENST00000261037 DRD3P35462 400 aa10.74□□□□□ -0.69
COL8A1-201ENST00000261037 RHOBP62745 196 aa10.74□□□□□ -0.69
COL8A1-201ENST00000261037 HTRA4P83105 476 aaPredicted RBP10.74□□□□□ -0.69
COL8A1-201ENST00000261037 RAB32Q13637 225 aa10.74□□□□□ -0.69
COL8A1-201ENST00000261037 SSX1Q16384 188 aa10.74□□□□□ -0.69
COL8A1-201ENST00000261037 TNXAQ16473 311 aa10.74□□□□□ -0.69
COL8A1-201ENST00000261037 GUK1Q16774 197 aa10.74□□□□□ -0.69
COL8A1-201ENST00000261037 LINC00299Q6ZSB3 139 aa10.74□□□□□ -0.69
COL8A1-201ENST00000261037 CYSLTR2Q9NS75 346 aa10.74□□□□□ -0.69
COL8A1-201ENST00000261037 CDC42EP2O14613 210 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 NDUFB6O95139 128 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 RAB5AP20339 215 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 TPPP2P59282 170 aa10.73□□□□□ -0.69
COL8A1-201ENST00000261037 PAX5Q02548 391 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms