RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 A0A1B0GW55 424 aa12.76□□□□□ -0.37
TRAFD1-201ENST00000257604 ZNF716A6NP11 495 aa12.76□□□□□ -0.37
TRAFD1-201ENST00000257604 ERCC1P07992 297 aaPredicted RBP12.76□□□□□ -0.37
TRAFD1-201ENST00000257604 ZNF806P0C7X5 589 aa12.76□□□□□ -0.37
TRAFD1-201ENST00000257604 DUX4L2P0CJ85 424 aa12.76□□□□□ -0.37
TRAFD1-201ENST00000257604 DUX4L3P0CJ86 424 aa12.76□□□□□ -0.37
TRAFD1-201ENST00000257604 DUX4L4P0CJ87 422 aa12.76□□□□□ -0.37
TRAFD1-201ENST00000257604 DUX4L5P0CJ88 424 aa12.76□□□□□ -0.37
TRAFD1-201ENST00000257604 DUX4L6P0CJ89 424 aa12.76□□□□□ -0.37
TRAFD1-201ENST00000257604 DUX4L7P0CJ90 424 aa12.76□□□□□ -0.37
TRAFD1-201ENST00000257604 PGAM2P15259 253 aa12.76□□□□□ -0.37
TRAFD1-201ENST00000257604 RRADP55042 308 aa12.76□□□□□ -0.37
TRAFD1-201ENST00000257604 PPP1R1AQ13522 171 aa12.76□□□□□ -0.37
TRAFD1-201ENST00000257604 HIST3H3Q16695 136 aa12.76□□□□□ -0.37
TRAFD1-201ENST00000257604 OR5M8Q8NGP6 311 aa12.76□□□□□ -0.37
TRAFD1-201ENST00000257604 OR14K1Q8NGZ2 314 aa12.76□□□□□ -0.37
TRAFD1-201ENST00000257604 OR4K15Q8NH41 348 aa12.76□□□□□ -0.37
TRAFD1-201ENST00000257604 OR1F12Q8NHA8 337 aa12.76□□□□□ -0.37
TRAFD1-201ENST00000257604 MARCH1Q8TCQ1 289 aa12.76□□□□□ -0.37
TRAFD1-201ENST00000257604 DDA1Q9BW61 102 aa12.76□□□□□ -0.37
TRAFD1-201ENST00000257604 CST11Q9H112 138 aa12.76□□□□□ -0.37
TRAFD1-201ENST00000257604 TLNRD1Q9H1K6 362 aa12.76□□□□□ -0.37
TRAFD1-201ENST00000257604 DUX4Q9UBX2 424 aa12.76□□□□□ -0.37
TRAFD1-201ENST00000257604 TNFSF18Q9UNG2 199 aa12.76□□□□□ -0.37
TRAFD1-201ENST00000257604 A0A0D9SG52 128 aa12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 OR14I1A6ND48 311 aa12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 CDC14BO60729 498 aa12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 ACTL6AO96019 429 aa12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 KNG1P01042 644 aa12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 FSTP19883 344 aa12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 DUSP1P28562 367 aa12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 OR3A2P47893 321 aa12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 PLAC9Q5JTB6 97 aa12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 DBX2Q6ZNG2 339 aa12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 KCNRGQ8N5I3 272 aa12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 OR13C8Q8NGS7 320 aa12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 THAP6Q8TBB0 222 aa12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 FOXRED1Q96CU9 486 aaPredicted RBP12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 TMEM38BQ9NVV0 291 aa12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 KIAA2026Q5HYC2 2103 aa12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 BCL2L11O43521 198 aa12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 FTH1P19P0C7X4 201 aa12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 AMY2BP19961 511 aa12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 FKBP2P26885 142 aaKnown RBP12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 RBMXP38159 391 aaKnown RBP12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 PTGFRP43088 359 aa12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 RSU1Q15404 277 aa12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 SLC9A3R2Q15599 337 aa12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 MPPED2Q15777 294 aa12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 PAN3Q58A45 887 aaKnown RBP12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 CLEC9AQ6UXN8 241 aa12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 ADPRHL1Q8NDY3 354 aa12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 SEMA6DQ8NFY4 1073 aa12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 KCNE4Q8WWG9 221 aa12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 CDC6Q99741 560 aa12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 LPAR5Q9H1C0 372 aa12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 GPR35Q9HC97 309 aa12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 PLEKHJ1Q9NW61 149 aa12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 TMEM218A2RU14 115 aa12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 RAD51DO75771 328 aa12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 DHRS3O75911 302 aa12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 AGTR1P30556 359 aa12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 LSM6P62312 80 aaKnown RBP12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 ZNF92Q03936 586 aa12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 H3F3CQ6NXT2 135 aa12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 CSNK2A3Q8NEV1 391 aa12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 TMEM54Q969K7 222 aa12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 ZNF703Q9H7S9 590 aaPredicted RBP12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 IFT22Q9H7X7 185 aa12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 MCTS1Q9ULC4 181 aaKnown RBP12.75□□□□□ -0.37
TRAFD1-201ENST00000257604 MPTX1A8MV57 137 aa12.74□□□□□ -0.37
TRAFD1-201ENST00000257604 ZNF883P0CG24 379 aa12.74□□□□□ -0.37
TRAFD1-201ENST00000257604 SPP1P10451 314 aa12.74□□□□□ -0.37
TRAFD1-201ENST00000257604 IL13RA1P78552 427 aa12.74□□□□□ -0.37
TRAFD1-201ENST00000257604 HIKESHIQ53FT3 197 aa12.74□□□□□ -0.37
TRAFD1-201ENST00000257604 PLCXD3Q63HM9 321 aa12.74□□□□□ -0.37
TRAFD1-201ENST00000257604 NANPQ8TBE9 248 aa12.74□□□□□ -0.37
TRAFD1-201ENST00000257604 DCUN1D4Q92564 292 aa12.74□□□□□ -0.37
TRAFD1-201ENST00000257604 BORCS8Q96FH0 119 aa12.74□□□□□ -0.37
TRAFD1-201ENST00000257604 FAM117AQ9C073 453 aa12.74□□□□□ -0.37
TRAFD1-201ENST00000257604 GSKIPQ9P0R6 139 aa12.74□□□□□ -0.37
TRAFD1-201ENST00000257604 FOXD3Q9UJU5 478 aaPredicted RBP12.74□□□□□ -0.37
TRAFD1-201ENST00000257604 SHANK1Q9Y566 2161 aa12.74□□□□□ -0.37
TRAFD1-201ENST00000257604 PCSK5Q92824 1860 aa12.74□□□□□ -0.37
TRAFD1-201ENST00000257604 ZNF260Q3ZCT1 412 aa12.74□□□□□ -0.37
TRAFD1-201ENST00000257604 C1orf100Q5SVJ3 147 aa12.74□□□□□ -0.37
TRAFD1-201ENST00000257604 FIP1L1Q6UN15 594 aaKnown RBP12.74□□□□□ -0.37
TRAFD1-201ENST00000257604 CNEP1R1Q8N9A8 125 aa12.74□□□□□ -0.37
TRAFD1-201ENST00000257604 INO80EQ8NBZ0 244 aaPredicted RBP12.74□□□□□ -0.37
TRAFD1-201ENST00000257604 KCNG3Q8TAE7 436 aa12.74□□□□□ -0.37
TRAFD1-201ENST00000257604 CPNE4Q96A23 557 aaPredicted RBP12.74□□□□□ -0.37
TRAFD1-201ENST00000257604 PAPOLGQ9BWT3 736 aaKnown RBP12.74□□□□□ -0.37
TRAFD1-201ENST00000257604 EDARQ9UNE0 448 aa12.74□□□□□ -0.37
TRAFD1-201ENST00000257604 ZNF587BE7ETH6 402 aa12.73□□□□□ -0.37
TRAFD1-201ENST00000257604 ADAP1O75689 374 aa12.73□□□□□ -0.37
TRAFD1-201ENST00000257604 TMEM50BP56557 158 aa12.73□□□□□ -0.37
TRAFD1-201ENST00000257604 AIMP2Q13155 320 aaKnown RBP12.73□□□□□ -0.37
TRAFD1-201ENST00000257604 SLC10A1Q14973 349 aa12.73□□□□□ -0.37
TRAFD1-201ENST00000257604 HFEQ30201 348 aa12.73□□□□□ -0.37
TRAFD1-201ENST00000257604 RNFT1Q5M7Z0 435 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms