RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 CCL25O15444 150 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 SNAI2O43623 268 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 DUX1O43812 170 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 ECI1P42126 302 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 PMP22Q01453 160 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 AGTRAPQ6RW13 159 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 PARM1Q6UWI2 310 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 SLCO4C1Q6ZQN7 724 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 OR4C13Q8NGP0 309 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 OR5AK2Q8NH90 309 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 PTPMT1Q8WUK0 201 aaPredicted RBP6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 DUX5Q96PT3 197 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 TTTY10Q9BZA0 68 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 FNDC4Q9H6D8 234 aaPredicted RBP6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 BPIFA1Q9NP55 256 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 COL11A2P13942 1736 aaPredicted RBP6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 ZNF860A6NHJ4 632 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 SMIM17P0DL12 118 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 HKR1P10072 659 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 MPZP25189 248 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 MELKQ14680 651 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 ZNF880Q6PDB4 577 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 WDTC1Q8N5D0 677 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 TMEM217Q8N7C4 229 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 RNASEH2CQ8TDP1 164 aaKnown RBP6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 PTX4Q96A99 478 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 MED29Q9NX70 200 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 A0A1W2PQM1 296 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 OR2W5A6NFC9 320 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 J3QR06 171 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 M0QZQ0 153 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 HCRTO43612 131 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 APODP05090 189 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 NBEAP1P0C6P0 100 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 NSG1P42857 185 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 PTGER3P43115 390 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 KIR2DS4P43632 304 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 VEGFBP49765 207 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 SNU13P55769 128 aaKnown RBP6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 RPS23P62266 143 aaKnown RBP6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 HFE2Q6ZVN8 426 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 DOLPP1Q86YN1 238 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 ZNF695Q8IW36 515 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 D2HGDHQ8N465 521 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 ARL14EPQ8N8R7 260 aaPredicted RBP6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 OR1K1Q8NGR3 316 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 FAM173AQ9BQD7 235 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 RTP3Q9BQQ7 232 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 LINC00470Q9BZP3 86 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 IL21Q9HBE4 155 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 TMEM106BQ9NUM4 274 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 ZNF257Q9Y2Q1 563 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 A0A0A6YYC8 382 aaPredicted RBP6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 OR11H12B2RN74 326 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 H3BUT2 72 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 I3L1I5 382 aaPredicted RBP6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 CT45A10P0DMU9 189 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 CEACAM1P13688 526 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 THBS2P35442 1172 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 OR3A4PP47883 348 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 SHC2P98077 582 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 GGTA1PQ4G0N0 100 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 TXNRD3NBQ6F5E7 133 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 LCN15Q6UWW0 184 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 BHLHA15Q7RTS1 189 aaPredicted RBP6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 DMBX1Q8NFW5 382 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 OR11H1Q8NG94 326 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 OR11H2Q8NH07 326 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 GHSRQ92847 366 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 RAX2Q96IS3 184 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 GDF15Q99988 308 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 MAP1LC3AQ9H492 121 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 GAGE12HA6NDE8 117 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 IDSB3KWA1 339 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 IL6RP08887 468 aaPredicted RBP6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 SMIM13P0DJ93 91 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 IDSP22304 550 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 P2RX1P51575 399 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 ZNF766Q5HY98 468 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 HMGN2P46Q86SG4 172 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 ADGRE4PQ86SQ3 457 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 H1FOOQ8IZA3 346 aaPredicted RBP6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 OR10S1Q8NGN2 331 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 FLRT3Q9NZU0 649 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 TMEFF2Q9UIK5 374 aaPredicted RBP6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 ZNF391Q9UJN7 358 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 PSMB11A5LHX3 300 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 C17orf112F2Z3M2 114 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 C3orf80F5H4A9 247 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 ERI3O43414 337 aaKnown RBP6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 LATO43561 262 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 LMX1BO60663 402 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 PRNPP04156 253 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 PXNP49023 591 aaPredicted RBP6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 IL13RA2Q14627 380 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 CSNK1A1LQ8N752 337 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 LHX4Q969G2 390 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 ESAMQ96AP7 390 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 CTHRC1Q96CG8 243 aa6.04□□□□□ -1.44
PDGFRA-201ENST00000257290 TMEM56Q96MV1 263 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms