RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 MMP24Q9Y5R2 645 aa15.6■□□□□ 0.09
CLN6-221ENST00000637494 IGKV1D-17A0A075B6S4 117 aa15.59■□□□□ 0.09
CLN6-221ENST00000637494 TRBV23-1A0A0A0MS06 115 aa15.59■□□□□ 0.09
CLN6-221ENST00000637494 A0A1W2PPH5 198 aa15.59■□□□□ 0.09
CLN6-221ENST00000637494 METTL15A6NJ78 407 aa15.59■□□□□ 0.09
CLN6-221ENST00000637494 J3QT63 122 aa15.59■□□□□ 0.09
CLN6-221ENST00000637494 SULT1C4O75897 302 aa15.59■□□□□ 0.09
CLN6-221ENST00000637494 PAHP00439 452 aa15.59■□□□□ 0.09
CLN6-221ENST00000637494 KNG1P01042 644 aa15.59■□□□□ 0.09
CLN6-221ENST00000637494 MDKP21741 143 aaPredicted RBP15.59■□□□□ 0.09
CLN6-221ENST00000637494 RAG2P55895 527 aa15.59■□□□□ 0.09
CLN6-221ENST00000637494 ACP7Q6ZNF0 438 aa15.59■□□□□ 0.09
CLN6-221ENST00000637494 ASRGL1Q7L266 308 aa15.59■□□□□ 0.09
CLN6-221ENST00000637494 LDLRAD3Q86YD5 345 aa15.59■□□□□ 0.09
CLN6-221ENST00000637494 C10orf67Q8IYJ2 551 aa15.59■□□□□ 0.09
CLN6-221ENST00000637494 ZNRF1Q8ND25 227 aa15.59■□□□□ 0.09
CLN6-221ENST00000637494 A0A1W2PQL4 384 aaPredicted RBP15.58■□□□□ 0.08
CLN6-221ENST00000637494 H0YAE9 185 aa15.58■□□□□ 0.08
CLN6-221ENST00000637494 SYT7O43581 403 aa15.58■□□□□ 0.08
CLN6-221ENST00000637494 NXPH2O95156 264 aa15.58■□□□□ 0.08
CLN6-221ENST00000637494 TFF1P04155 84 aa15.58■□□□□ 0.08
CLN6-221ENST00000637494 ODF4Q2M2E3 257 aa15.58■□□□□ 0.08
CLN6-221ENST00000637494 TMEM42Q69YG0 159 aa15.58■□□□□ 0.08
CLN6-221ENST00000637494 GDPGP1Q6ZNW5 385 aa15.58■□□□□ 0.08
CLN6-221ENST00000637494 C17orf107Q6ZR85 190 aa15.58■□□□□ 0.08
CLN6-221ENST00000637494 FAM185AQ8N0U4 392 aa15.58■□□□□ 0.08
CLN6-221ENST00000637494 ZNF561Q8N587 486 aa15.58■□□□□ 0.08
CLN6-221ENST00000637494 OR5D13Q8NGL4 314 aa15.58■□□□□ 0.08
CLN6-221ENST00000637494 OR14K1Q8NGZ2 314 aa15.58■□□□□ 0.08
CLN6-221ENST00000637494 TRUB1Q8WWH5 349 aaKnown RBP15.58■□□□□ 0.08
CLN6-221ENST00000637494 SDSLQ96GA7 329 aa15.58■□□□□ 0.08
CLN6-221ENST00000637494 ZNF696Q9H7X3 374 aa15.58■□□□□ 0.08
CLN6-221ENST00000637494 SLC22A13Q9Y226 551 aa15.58■□□□□ 0.08
CLN6-221ENST00000637494 TENM1Q9UKZ4 2725 aa15.57■□□□□ 0.08
CLN6-221ENST00000637494 A0A1B0GTI1 187 aa15.57■□□□□ 0.08
CLN6-221ENST00000637494 PQLC2LA1A4F0 135 aa15.57■□□□□ 0.08
CLN6-221ENST00000637494 ANKRD61A6NGH8 418 aa15.57■□□□□ 0.08
CLN6-221ENST00000637494 RFPL4AA6NLU0 287 aa15.57■□□□□ 0.08
CLN6-221ENST00000637494 RFPL4AL1F8VTS6 287 aa15.57■□□□□ 0.08
CLN6-221ENST00000637494 NPFFO15130 113 aa15.57■□□□□ 0.08
CLN6-221ENST00000637494 GATBO75879 557 aaKnown RBP15.57■□□□□ 0.08
CLN6-221ENST00000637494 NDUFA7O95182 113 aa15.57■□□□□ 0.08
CLN6-221ENST00000637494 SERPINA3P01011 423 aa15.57■□□□□ 0.08
CLN6-221ENST00000637494 IGHV4-59P01825 116 aa15.57■□□□□ 0.08
CLN6-221ENST00000637494 PGA5P0DJD9 388 aa15.57■□□□□ 0.08
CLN6-221ENST00000637494 POLR2IP36954 125 aaKnown RBP15.57■□□□□ 0.08
CLN6-221ENST00000637494 IER3P46695 156 aa15.57■□□□□ 0.08
CLN6-221ENST00000637494 ZFP1Q6P2D0 407 aa15.57■□□□□ 0.08
CLN6-221ENST00000637494 CCDC121Q6ZUS5 278 aa15.57■□□□□ 0.08
CLN6-221ENST00000637494 SSX6Q7RTT6 188 aa15.57■□□□□ 0.08
CLN6-221ENST00000637494 CATSPERDQ86XM0 798 aa15.57■□□□□ 0.08
CLN6-221ENST00000637494 Q8N7P7 452 aa15.57■□□□□ 0.08
CLN6-221ENST00000637494 PYDC1Q8WXC3 89 aa15.57■□□□□ 0.08
CLN6-221ENST00000637494 ZNF222Q9UK12 451 aa15.57■□□□□ 0.08
CLN6-221ENST00000637494 MAB21L2Q9Y586 359 aa15.57■□□□□ 0.08
CLN6-221ENST00000637494 hCG_1809904A0A1W2PP81 198 aa15.56■□□□□ 0.08
CLN6-221ENST00000637494 A0A1W2PPE2 198 aa15.56■□□□□ 0.08
CLN6-221ENST00000637494 FAM230AA0A1W2PPH8 454 aa15.56■□□□□ 0.08
CLN6-221ENST00000637494 A0A1W2PR64 198 aa15.56■□□□□ 0.08
CLN6-221ENST00000637494 A0A1W2PRD5 423 aa15.56■□□□□ 0.08
CLN6-221ENST00000637494 A0A1W2PRF3 423 aa15.56■□□□□ 0.08
CLN6-221ENST00000637494 A0A1W2PRM7 423 aa15.56■□□□□ 0.08
CLN6-221ENST00000637494 A0A1W2PRV1 198 aa15.56■□□□□ 0.08
CLN6-221ENST00000637494 SNTNA6NMZ2 147 aa15.56■□□□□ 0.08
CLN6-221ENST00000637494 RNASEK-C17orf49H0YIS7 233 aa15.56■□□□□ 0.08
CLN6-221ENST00000637494 SYNGR1O43759 233 aa15.56■□□□□ 0.08
CLN6-221ENST00000637494 NOS1APO75052 506 aaPredicted RBP15.56■□□□□ 0.08
CLN6-221ENST00000637494 APOL3O95236 402 aa15.56■□□□□ 0.08
CLN6-221ENST00000637494 CCL1P22362 96 aa15.56■□□□□ 0.08
CLN6-221ENST00000637494 PRDX2P32119 198 aa15.56■□□□□ 0.08
CLN6-221ENST00000637494 UBE2E1P51965 193 aa15.56■□□□□ 0.08
CLN6-221ENST00000637494 ACTC1P68032 377 aa15.56■□□□□ 0.08
CLN6-221ENST00000637494 ACTA1P68133 377 aa15.56■□□□□ 0.08
CLN6-221ENST00000637494 PRR31Q5SQ13 230 aa15.56■□□□□ 0.08
CLN6-221ENST00000637494 OLFML2AQ68BL7 652 aa15.56■□□□□ 0.08
CLN6-221ENST00000637494 PIP4P2Q8N4L2 257 aa15.56■□□□□ 0.08
CLN6-221ENST00000637494 TAF15Q92804 592 aaKnown RBP eCLIP15.56■□□□□ 0.08
CLN6-221ENST00000637494 EME1Q96AY2 570 aa15.56■□□□□ 0.08
CLN6-221ENST00000637494 ZNF488Q96MN9 340 aa15.56■□□□□ 0.08
CLN6-221ENST00000637494 PKIBQ9C010 78 aa15.56■□□□□ 0.08
CLN6-221ENST00000637494 ELL3Q9HB65 397 aaPredicted RBP15.56■□□□□ 0.08
CLN6-221ENST00000637494 C1RLQ9NZP8 487 aa15.56■□□□□ 0.08
CLN6-221ENST00000637494 GNG8Q9UK08 70 aa15.56■□□□□ 0.08
CLN6-221ENST00000637494 SF3B6Q9Y3B4 125 aaKnown RBP15.56■□□□□ 0.08
CLN6-221ENST00000637494 MEIOCA2RUB1 952 aa15.55■□□□□ 0.08
CLN6-221ENST00000637494 A6NIN4 97 aa15.55■□□□□ 0.08
CLN6-221ENST00000637494 GPR137BO60478 399 aa15.55■□□□□ 0.08
CLN6-221ENST00000637494 UBCP0CG48 685 aaKnown RBP15.55■□□□□ 0.08
CLN6-221ENST00000637494 ACSM1Q08AH1 577 aa15.55■□□□□ 0.08
CLN6-221ENST00000637494 KLRD1Q13241 179 aa15.55■□□□□ 0.08
CLN6-221ENST00000637494 MEDAGQ5VYS4 303 aa15.55■□□□□ 0.08
CLN6-221ENST00000637494 Q6ZSR3 168 aa15.55■□□□□ 0.08
CLN6-221ENST00000637494 TRMT10AQ8TBZ6 339 aaKnown RBP15.55■□□□□ 0.08
CLN6-221ENST00000637494 MRPL48Q96GC5 212 aaKnown RBP15.55■□□□□ 0.08
CLN6-221ENST00000637494 MYCBPQ99417 103 aaPredicted RBP15.55■□□□□ 0.08
CLN6-221ENST00000637494 OR14J1Q9UGF5 321 aa15.55■□□□□ 0.08
CLN6-221ENST00000637494 MPZP25189 248 aa15.54■□□□□ 0.08
CLN6-221ENST00000637494 FUT6P51993 359 aa15.54■□□□□ 0.08
CLN6-221ENST00000637494 RPL31P62899 125 aaKnown RBP15.54■□□□□ 0.08
CLN6-221ENST00000637494 IL24Q13007 206 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms