RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 CYSRT1A8MQ03 144 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 FOXI3A8MTJ6 420 aaPredicted RBP2.52□□□□□ -2.01
VIM-210ENST00000637053 PRR32B1ATL7 298 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 H3BMQ9 156 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 H3BQF6 201 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 TMEM178BH3BS89 294 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 M0R1B8 84 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 PPIHO43447 177 aaKnown RBP2.52□□□□□ -2.01
VIM-210ENST00000637053 GNG7O60262 68 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 RDH16O75452 317 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 GCM2O75603 506 aaPredicted RBP2.52□□□□□ -2.01
VIM-210ENST00000637053 C1QL1O75973 258 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 WISP2O76076 250 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 GADD45GO95257 159 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 SOX14O95416 240 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 CDS2O95674 445 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 GLUD1P00367 558 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 SEMG1P04279 462 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 PSG1P11464 419 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 HIST1H1BP16401 226 aaKnown RBP2.52□□□□□ -2.01
VIM-210ENST00000637053 SLC2A5P22732 501 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 GATA3P23771 443 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 CHRNB4P30926 498 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 APLNRP35414 380 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 GLRXP35754 106 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 RPL3P39023 403 aaKnown RBP2.52□□□□□ -2.01
VIM-210ENST00000637053 MDH2P40926 338 aaKnown RBP2.52□□□□□ -2.01
VIM-210ENST00000637053 NR4A2P43354 598 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 GALR1P47211 349 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 OR1D4P47884 311 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 REG1BP48304 166 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 TFPI2P48307 235 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 SSR4P51571 173 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 OR12D2P58182 307 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 HSPE1P61604 102 aaKnown RBP2.52□□□□□ -2.01
VIM-210ENST00000637053 PPP1CBP62140 327 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 RPS14P62263 151 aaKnown RBP2.52□□□□□ -2.01
VIM-210ENST00000637053 RUNX1Q01196 453 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 SMAGPQ0VAQ4 97 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 TAF10Q12962 218 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 PMVKQ15126 192 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 SHHQ15465 462 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 TRIP6Q15654 476 aaKnown RBP2.52□□□□□ -2.01
VIM-210ENST00000637053 MICAQ29983 383 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 ACOT6Q3I5F7 207 aaPredicted RBP2.52□□□□□ -2.01
VIM-210ENST00000637053 CYBRD1Q53TN4 286 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 NCMAPQ5T1S8 102 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 TEDDM1Q5T9Z0 273 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 AWAT2Q6E213 333 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 OR4C11Q6IEV9 310 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 OR10K2Q6IF99 312 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 WDR82Q6UXN9 313 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 ZNF66Q6ZN08 573 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 C9orf139Q6ZV77 190 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 STRADAQ7RTN6 431 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 PRSS41Q7RTY9 318 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 SFTPA1Q8IWL2 248 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 LYG1Q8N1E2 194 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 OSR2Q8N2R0 312 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 CLIP4Q8N3C7 705 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 PGBD5Q8N414 524 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 LRRC57Q8N9N7 239 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 CHST4Q8NCG5 386 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 OR2K2Q8NGT1 345 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 SLC37A2Q8TED4 501 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 ORAOV1Q8WV07 137 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 PCNPQ8WW12 178 aaKnown RBP2.52□□□□□ -2.01
VIM-210ENST00000637053 TMED6Q8WW62 240 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 TADA1Q96BN2 335 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 SARAFQ96BY9 339 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 CMBLQ96DG6 245 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 OXGR1Q96P68 337 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 MS4A4EQ96PG1 132 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 OR52E6Q96RD3 313 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 HSPB9Q9BQS6 159 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 ZNF670Q9BS34 389 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 EBPLQ9BY08 206 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 SPRY4Q9C004 299 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 TMEM126AQ9H061 195 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 FBXL15Q9H469 300 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 PELI2Q9HAT8 420 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 ELL3Q9HB65 397 aaPredicted RBP2.52□□□□□ -2.01
VIM-210ENST00000637053 EXOSC4Q9NPD3 245 aaKnown RBP2.52□□□□□ -2.01
VIM-210ENST00000637053 KCNJ16Q9NPI9 418 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 LHX9Q9NQ69 397 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 CISHQ9NSE2 258 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 TMEM38BQ9NVV0 291 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 SPANXCQ9NY87 97 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 GALPQ9UBC7 116 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 DKK2Q9UBU2 259 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 IL36AQ9UHA7 158 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 SCP2D1Q9UJQ7 156 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 ZNF780BQ9Y6R6 833 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 DNMBPQ6XZF7 1577 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 IFT140Q96RY7 1462 aa2.52□□□□□ -2.01
VIM-210ENST00000637053 NOS1P29475 1434 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 YTHDC2Q9H6S0 1430 aaKnown RBP2.51□□□□□ -2.01
VIM-210ENST00000637053 MED23Q9ULK4 1368 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 YLPM1P49750 1951 aaKnown RBP2.51□□□□□ -2.01
VIM-210ENST00000637053 BORCS7-ASMTA0A0B4J1R7 106 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms