RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 TMPRSS13Q9BYE2 586 aa8.19□□□□□ -1.1
CSMD1-218ENST00000635120 LYRM2Q9NU23 88 aaPredicted RBP8.19□□□□□ -1.1
CSMD1-218ENST00000635120 OR2M5A3KFT3 312 aa8.19□□□□□ -1.1
CSMD1-218ENST00000635120 LINC01553A4QN01 128 aa8.19□□□□□ -1.1
CSMD1-218ENST00000635120 PRRT4C9JH25 899 aa8.19□□□□□ -1.1
CSMD1-218ENST00000635120 ADAM20O43506 726 aa8.19□□□□□ -1.1
CSMD1-218ENST00000635120 ZXDAP98168 799 aa8.19□□□□□ -1.1
CSMD1-218ENST00000635120 GLDNQ6ZMI3 551 aaPredicted RBP8.19□□□□□ -1.1
CSMD1-218ENST00000635120 SLC16A13Q7RTY0 426 aa8.19□□□□□ -1.1
CSMD1-218ENST00000635120 LRP11Q86VZ4 500 aa8.19□□□□□ -1.1
CSMD1-218ENST00000635120 ICAM5Q9UMF0 924 aa8.19□□□□□ -1.1
CSMD1-218ENST00000635120 FGF8P55075 233 aaPredicted RBP8.19□□□□□ -1.1
CSMD1-218ENST00000635120 SP6Q3SY56 376 aa8.19□□□□□ -1.1
CSMD1-218ENST00000635120 PTOV1Q86YD1 416 aa8.19□□□□□ -1.1
CSMD1-218ENST00000635120 APOBEC3DQ96AK3 386 aaPredicted RBP8.19□□□□□ -1.1
CSMD1-218ENST00000635120 UBR3Q6ZT12 1888 aa8.19□□□□□ -1.1
CSMD1-218ENST00000635120 MED19A0JLT2 244 aaPredicted RBP8.19□□□□□ -1.1
CSMD1-218ENST00000635120 KIAA1324LA8MWY0 1029 aaPredicted RBP8.19□□□□□ -1.1
CSMD1-218ENST00000635120 GYPAP02724 150 aa8.19□□□□□ -1.1
CSMD1-218ENST00000635120 HMGA1P17096 107 aaKnown RBP8.19□□□□□ -1.1
CSMD1-218ENST00000635120 OR2Z1Q8NG97 314 aa8.19□□□□□ -1.1
CSMD1-218ENST00000635120 PDFQ9HBH1 243 aa8.19□□□□□ -1.1
CSMD1-218ENST00000635120 GFERP55789 205 aa8.19□□□□□ -1.1
CSMD1-218ENST00000635120 RPEL1Q2QD12 228 aa8.19□□□□□ -1.1
CSMD1-218ENST00000635120 SPPL3Q8TCT6 385 aa8.19□□□□□ -1.1
CSMD1-218ENST00000635120 MYO18BQ8IUG5 2567 aa8.19□□□□□ -1.1
CSMD1-218ENST00000635120 CCKARP32238 428 aa8.19□□□□□ -1.1
CSMD1-218ENST00000635120 BMI1P35226 326 aa8.19□□□□□ -1.1
CSMD1-218ENST00000635120 PAX5Q02548 391 aa8.19□□□□□ -1.1
CSMD1-218ENST00000635120 Q56UQ5 140 aa8.19□□□□□ -1.1
CSMD1-218ENST00000635120 FAM209AQ5JX71 171 aa8.19□□□□□ -1.1
CSMD1-218ENST00000635120 ETFBKMTQ8IXQ9 262 aa8.19□□□□□ -1.1
CSMD1-218ENST00000635120 OR10D4PQ8NGN7 298 aa8.19□□□□□ -1.1
CSMD1-218ENST00000635120 LOXL2Q9Y4K0 774 aa8.19□□□□□ -1.1
CSMD1-218ENST00000635120 ZGLP1P0C6A0 271 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 CD300CQ08708 224 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 OR1L4Q8NGR5 311 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 CMTM3Q96MX0 182 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 B9D1Q9UPM9 204 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 UFC1Q9Y3C8 167 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 ABCD3P28288 659 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 LIMK1P53667 647 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 DEFB109BQ30KR1 87 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 PLA1AQ53H76 456 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 C11orf87Q6NUJ2 197 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 ARHGAP5-AS1Q96IT6 56 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 POMT1Q9Y6A1 747 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 BMPR1BO00238 502 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 GUK1Q16774 197 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 GGNBP1Q5YKI7 109 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 MRGPREQ86SM8 312 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 KTI12Q96EK9 354 aaPredicted RBP8.18□□□□□ -1.1
CSMD1-218ENST00000635120 POMT2Q9UKY4 750 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 HDGFL3Q9Y3E1 203 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 SLC37A1P57057 533 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.18□□□□□ -1.1
CSMD1-218ENST00000635120 PLPPR2Q96GM1 343 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 PTPN13Q12923 2485 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 OPRK1P41145 380 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 RGS7BPQ6MZT1 257 aaPredicted RBP8.18□□□□□ -1.1
CSMD1-218ENST00000635120 KIRREL2Q6UWL6 708 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 DUSP18Q8NEJ0 188 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 OR2W5A6NFC9 320 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 DEFB108AA8MXU0 73 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 GZMKP49863 264 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 MMP7P09237 267 aaPredicted RBP8.18□□□□□ -1.1
CSMD1-218ENST00000635120 KCNJ3P48549 501 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 PGFP49763 221 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 CTF1Q16619 201 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 SPINK9Q5DT21 86 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 VASH2Q86V25 355 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 C20orf196Q8IYI0 205 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 UBALD1Q8TB05 177 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 DOK1Q99704 481 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 TMEM147Q9BVK8 224 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 SLC35B3Q9H1N7 401 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 SONP18583 2426 aaKnown RBP8.18□□□□□ -1.1
CSMD1-218ENST00000635120 FGF20Q9NP95 211 aaPredicted RBP8.18□□□□□ -1.1
CSMD1-218ENST00000635120 F5H697 171 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 M0R1X1 148 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 ZBTB25P24278 435 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 TM4SF4P48230 202 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 FAM3AP98173 230 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 DHRS2Q13268 280 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 OR5C1Q8NGR4 320 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 EXTL1Q92935 676 aa8.18□□□□□ -1.1
CSMD1-218ENST00000635120 CXCL13O43927 109 aa8.17□□□□□ -1.1
CSMD1-218ENST00000635120 SLC25A22Q9H936 323 aa8.17□□□□□ -1.1
CSMD1-218ENST00000635120 FOXJ3Q9UPW0 622 aa8.17□□□□□ -1.1
CSMD1-218ENST00000635120 CUL9Q8IWT3 2517 aa8.17□□□□□ -1.1
CSMD1-218ENST00000635120 A0A0A6YYD5 115 aa8.17□□□□□ -1.1
CSMD1-218ENST00000635120 FUT3P21217 361 aa8.17□□□□□ -1.1
CSMD1-218ENST00000635120 ACVR1Q04771 509 aa8.17□□□□□ -1.1
CSMD1-218ENST00000635120 ETFDHQ16134 617 aa8.17□□□□□ -1.1
CSMD1-218ENST00000635120 BTLAQ7Z6A9 289 aa8.17□□□□□ -1.1
CSMD1-218ENST00000635120 LSMEM1Q8N8F7 131 aa8.17□□□□□ -1.1
CSMD1-218ENST00000635120 WBP2Q969T9 261 aa8.17□□□□□ -1.1
CSMD1-218ENST00000635120 WASHC3Q9Y3C0 194 aa8.17□□□□□ -1.1
CSMD1-218ENST00000635120 GNG10P50151 68 aa8.17□□□□□ -1.1
CSMD1-218ENST00000635120 NOVA1P51513 510 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms