RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 CPNE2Q96FN4 548 aaPredicted RBP12.37□□□□□ -0.43
PNKP-221ENST00000627317 NOX4Q9NPH5 578 aa12.37□□□□□ -0.43
PNKP-221ENST00000627317 NDUFB11Q9NX14 153 aa12.37□□□□□ -0.43
PNKP-221ENST00000627317 NPTNQ9Y639 398 aa12.37□□□□□ -0.43
PNKP-221ENST00000627317 FBN1P35555 2871 aaKnown RBP12.37□□□□□ -0.43
PNKP-221ENST00000627317 MXRA5Q9NR99 2828 aa12.36□□□□□ -0.43
PNKP-221ENST00000627317 ALX3O95076 343 aa12.36□□□□□ -0.43
PNKP-221ENST00000627317 PLATP00750 562 aa12.36□□□□□ -0.43
PNKP-221ENST00000627317 CD80P33681 288 aa12.36□□□□□ -0.43
PNKP-221ENST00000627317 RBMXP38159 391 aaKnown RBP12.36□□□□□ -0.43
PNKP-221ENST00000627317 BTG1P62324 171 aa12.36□□□□□ -0.43
PNKP-221ENST00000627317 INSL4Q14641 139 aa12.36□□□□□ -0.43
PNKP-221ENST00000627317 SSX1Q16384 188 aa12.36□□□□□ -0.43
PNKP-221ENST00000627317 CEACAM19Q7Z692 300 aa12.36□□□□□ -0.43
PNKP-221ENST00000627317 C11orf53Q8IXP5 236 aa12.36□□□□□ -0.43
PNKP-221ENST00000627317 ZNF671Q8TAW3 534 aa12.36□□□□□ -0.43
PNKP-221ENST00000627317 AQP3Q92482 292 aa12.36□□□□□ -0.43
PNKP-221ENST00000627317 MUL1Q969V5 352 aa12.36□□□□□ -0.43
PNKP-221ENST00000627317 ORAI1Q96D31 301 aa12.36□□□□□ -0.43
PNKP-221ENST00000627317 NARFLQ9H6Q4 476 aa12.36□□□□□ -0.43
PNKP-221ENST00000627317 METTL17Q9H7H0 456 aaPredicted RBP12.36□□□□□ -0.43
PNKP-221ENST00000627317 POLDIP2Q9Y2S7 368 aa12.36□□□□□ -0.43
PNKP-221ENST00000627317 ZNF205O95201 554 aa12.35□□□□□ -0.43
PNKP-221ENST00000627317 IGHV2-70P01814 119 aa12.35□□□□□ -0.43
PNKP-221ENST00000627317 TGFBR2P37173 567 aa12.35□□□□□ -0.43
PNKP-221ENST00000627317 MDH2P40926 338 aaKnown RBP12.35□□□□□ -0.43
PNKP-221ENST00000627317 POU3F4P49335 361 aa12.35□□□□□ -0.43
PNKP-221ENST00000627317 GP2P55259 537 aaKnown RBP12.35□□□□□ -0.43
PNKP-221ENST00000627317 HSD17B12Q53GQ0 312 aa12.35□□□□□ -0.43
PNKP-221ENST00000627317 DDI2Q5TDH0 399 aa12.35□□□□□ -0.43
PNKP-221ENST00000627317 ASPHD2Q6ICH7 369 aa12.35□□□□□ -0.43
PNKP-221ENST00000627317 ZNF529Q6P280 563 aa12.35□□□□□ -0.43
PNKP-221ENST00000627317 ANGPTL5Q86XS5 388 aa12.35□□□□□ -0.43
PNKP-221ENST00000627317 OR51A2Q8NGJ7 313 aa12.35□□□□□ -0.43
PNKP-221ENST00000627317 OR10Z1Q8NGY1 313 aa12.35□□□□□ -0.43
PNKP-221ENST00000627317 RFT1Q96AA3 541 aa12.35□□□□□ -0.43
PNKP-221ENST00000627317 SPACA5Q96QH8 159 aa12.35□□□□□ -0.43
PNKP-221ENST00000627317 GAL3ST1Q99999 423 aa12.35□□□□□ -0.43
PNKP-221ENST00000627317 PKIBQ9C010 78 aa12.35□□□□□ -0.43
PNKP-221ENST00000627317 TMEM138Q9NPI0 162 aa12.35□□□□□ -0.43
PNKP-221ENST00000627317 SF3B6Q9Y3B4 125 aaKnown RBP12.35□□□□□ -0.43
PNKP-221ENST00000627317 IGKV1-27A0A075B6S5 117 aa12.34□□□□□ -0.43
PNKP-221ENST00000627317 TRAV8-7A0A075B6U6 113 aa12.34□□□□□ -0.43
PNKP-221ENST00000627317 PPIAL4EA0A075B759 164 aa12.34□□□□□ -0.43
PNKP-221ENST00000627317 TRIM64CA6NLI5 447 aa12.34□□□□□ -0.43
PNKP-221ENST00000627317 SRRM5B3KS81 715 aa12.34□□□□□ -0.43
PNKP-221ENST00000627317 PPIAL4DF5H284 164 aa12.34□□□□□ -0.43
PNKP-221ENST00000627317 C3orf80F5H4A9 247 aa12.34□□□□□ -0.43
PNKP-221ENST00000627317 LGALS8O00214 317 aa12.34□□□□□ -0.43
PNKP-221ENST00000627317 GABRPO00591 440 aa12.34□□□□□ -0.43
PNKP-221ENST00000627317 AKR7A2O43488 359 aa12.34□□□□□ -0.43
PNKP-221ENST00000627317 SYNGR1O43759 233 aa12.34□□□□□ -0.43
PNKP-221ENST00000627317 RHBDL1O75783 438 aa12.34□□□□□ -0.43
PNKP-221ENST00000627317 ARL6IP5O75915 188 aa12.34□□□□□ -0.43
PNKP-221ENST00000627317 CYB5AP00167 134 aa12.34□□□□□ -0.43
PNKP-221ENST00000627317 SMIM18P0DKX4 95 aa12.34□□□□□ -0.43
PNKP-221ENST00000627317 PPIAL4FP0DN26 164 aa12.34□□□□□ -0.43
PNKP-221ENST00000627317 IGFBP3P17936 291 aaPredicted RBP12.34□□□□□ -0.43
PNKP-221ENST00000627317 EGR1P18146 543 aa12.34□□□□□ -0.43
PNKP-221ENST00000627317 MPZP25189 248 aa12.34□□□□□ -0.43
PNKP-221ENST00000627317 BDKRB2P30411 391 aa12.34□□□□□ -0.43
PNKP-221ENST00000627317 CFHR2P36980 270 aa12.34□□□□□ -0.43
PNKP-221ENST00000627317 GMFBP60983 142 aa12.34□□□□□ -0.43
PNKP-221ENST00000627317 FABP5Q01469 135 aa12.34□□□□□ -0.43
PNKP-221ENST00000627317 ZMYND11Q15326 602 aa12.34□□□□□ -0.43
PNKP-221ENST00000627317 FAM201AQ5SY85 155 aa12.34□□□□□ -0.43
PNKP-221ENST00000627317 FAM27D1Q5T7N8 215 aa12.34□□□□□ -0.43
PNKP-221ENST00000627317 SYT6Q5T7P8 510 aaPredicted RBP12.34□□□□□ -0.43
PNKP-221ENST00000627317 UNQ9370/PRO34162Q6UXP9 181 aa12.34□□□□□ -0.43
PNKP-221ENST00000627317 SATL1Q86VE3 508 aa12.34□□□□□ -0.43
PNKP-221ENST00000627317 CALHM1Q8IU99 346 aa12.34□□□□□ -0.43
PNKP-221ENST00000627317 MUC20Q8N307 709 aaPredicted RBP12.34□□□□□ -0.43
PNKP-221ENST00000627317 SPICQ8N5J4 248 aa12.34□□□□□ -0.43
PNKP-221ENST00000627317 GCSAMQ8N6F7 178 aa12.34□□□□□ -0.43
PNKP-221ENST00000627317 GPER1Q99527 375 aa12.34□□□□□ -0.43
PNKP-221ENST00000627317 TCF7L1Q9HCS4 588 aa12.34□□□□□ -0.43
PNKP-221ENST00000627317 FOXJ3Q9UPW0 622 aa12.34□□□□□ -0.43
PNKP-221ENST00000627317 PPIAL4AQ9Y536 164 aa12.34□□□□□ -0.43
PNKP-221ENST00000627317 TRAV38-1A0A0B4J264 116 aa12.33□□□□□ -0.44
PNKP-221ENST00000627317 MAGEA13PA6NCF6 341 aa12.33□□□□□ -0.44
PNKP-221ENST00000627317 OOEPA6NGQ2 149 aa12.33□□□□□ -0.44
PNKP-221ENST00000627317 A8MV72 311 aaPredicted RBP12.33□□□□□ -0.44
PNKP-221ENST00000627317 PIN1P1O15428 100 aa12.33□□□□□ -0.44
PNKP-221ENST00000627317 GPX5O75715 221 aa12.33□□□□□ -0.44
PNKP-221ENST00000627317 SC5DO75845 299 aa12.33□□□□□ -0.44
PNKP-221ENST00000627317 UCHL1P09936 223 aa12.33□□□□□ -0.44
PNKP-221ENST00000627317 PGA5P0DJD9 388 aa12.33□□□□□ -0.44
PNKP-221ENST00000627317 ZNF16P17020 682 aaPredicted RBP12.33□□□□□ -0.44
PNKP-221ENST00000627317 HOXA4Q00056 320 aaPredicted RBP12.33□□□□□ -0.44
PNKP-221ENST00000627317 IL24Q13007 206 aa12.33□□□□□ -0.44
PNKP-221ENST00000627317 KISS1Q15726 138 aa12.33□□□□□ -0.44
PNKP-221ENST00000627317 KCNJ8Q15842 424 aa12.33□□□□□ -0.44
PNKP-221ENST00000627317 TMEM91Q6ZNR0 172 aa12.33□□□□□ -0.44
PNKP-221ENST00000627317 SLC25A26Q70HW3 274 aa12.33□□□□□ -0.44
PNKP-221ENST00000627317 POC1AQ8NBT0 407 aa12.33□□□□□ -0.44
PNKP-221ENST00000627317 C19orf18Q8NEA5 215 aa12.33□□□□□ -0.44
PNKP-221ENST00000627317 DEFB108BQ8NET1 73 aa12.33□□□□□ -0.44
PNKP-221ENST00000627317 OR52N4Q8NGI2 321 aa12.33□□□□□ -0.44
PNKP-221ENST00000627317 OR5D18Q8NGL1 313 aa12.33□□□□□ -0.44
PNKP-221ENST00000627317 PHYHIPQ92561 330 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms