RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 C11orf53Q8IXP5 236 aa5.31□□□□□ -1.56
TCF4-249ENST00000625716 ELMOD2Q8IZ81 293 aa5.31□□□□□ -1.56
TCF4-249ENST00000625716 CBR4Q8N4T8 237 aa5.31□□□□□ -1.56
TCF4-249ENST00000625716 SIGLECL1Q8N7X8 197 aa5.31□□□□□ -1.56
TCF4-249ENST00000625716 SCCPDHQ8NBX0 429 aa5.31□□□□□ -1.56
TCF4-249ENST00000625716 ZNF555Q8NEP9 628 aa5.31□□□□□ -1.56
TCF4-249ENST00000625716 GCDHQ92947 438 aaPredicted RBP5.31□□□□□ -1.56
TCF4-249ENST00000625716 PPP1R14AQ96A00 147 aa5.31□□□□□ -1.56
TCF4-249ENST00000625716 EME1Q96AY2 570 aa5.31□□□□□ -1.56
TCF4-249ENST00000625716 TMIGD2Q96BF3 282 aa5.31□□□□□ -1.56
TCF4-249ENST00000625716 RNFT2Q96EX2 444 aa5.31□□□□□ -1.56
TCF4-249ENST00000625716 MED30Q96HR3 178 aa5.31□□□□□ -1.56
TCF4-249ENST00000625716 Q96MT0 163 aa5.31□□□□□ -1.56
TCF4-249ENST00000625716 CCL13Q99616 98 aa5.31□□□□□ -1.56
TCF4-249ENST00000625716 PCGF1Q9BSM1 259 aa5.31□□□□□ -1.56
TCF4-249ENST00000625716 KRTAP17-1Q9BYP8 105 aa5.31□□□□□ -1.56
TCF4-249ENST00000625716 TLNRD1Q9H1K6 362 aa5.31□□□□□ -1.56
TCF4-249ENST00000625716 PPP1R3EQ9H7J1 279 aa5.31□□□□□ -1.56
TCF4-249ENST00000625716 S100A14Q9HCY8 104 aa5.31□□□□□ -1.56
TCF4-249ENST00000625716 MRM2Q9UI43 246 aaKnown RBP5.31□□□□□ -1.56
TCF4-249ENST00000625716 GNG8Q9UK08 70 aa5.31□□□□□ -1.56
TCF4-249ENST00000625716 SLC7A11Q9UPY5 501 aa5.31□□□□□ -1.56
TCF4-249ENST00000625716 GMPPBQ9Y5P6 360 aa5.31□□□□□ -1.56
TCF4-249ENST00000625716 DHRS7CA6NNS2 312 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 PRR32B1ATL7 298 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 SRRM5B3KS81 715 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 ZNF879B4DU55 563 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 DLGAP1O14490 977 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 AKR7A2O43488 359 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 SYT7O43581 403 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 ENTPD6O75354 484 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 TOX4O94842 621 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 APOL3O95236 402 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 FSHBP01225 129 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 TTRP02766 147 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 OCM2P0CE71 109 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 OCMP0CE72 109 aaPredicted RBP5.3□□□□□ -1.56
TCF4-249ENST00000625716 FAHP16930 419 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 EGR1P18146 543 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 GABRA2P47869 451 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 CAPZA1P52907 286 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 BPIFB3P59826 476 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 SNRPGP62308 76 aaKnown RBP5.3□□□□□ -1.56
TCF4-249ENST00000625716 HOXA4Q00056 320 aaPredicted RBP5.3□□□□□ -1.56
TCF4-249ENST00000625716 PAX2Q02962 417 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 BAMBIQ13145 260 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 PDCD1Q15116 288 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 TP53I3Q53FA7 332 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 FAM76BQ5HYJ3 339 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 WDR38Q5JTN6 314 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 SLC25A30Q5SVS4 291 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 HAGHLQ6PII5 290 aaPredicted RBP5.3□□□□□ -1.56
TCF4-249ENST00000625716 CATSPERDQ86XM0 798 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 ZNF573Q86YE8 665 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 CMTM4Q8IZR5 234 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 PQLC1Q8N2U9 271 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.3□□□□□ -1.56
TCF4-249ENST00000625716 CCDC54Q8NEL0 328 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 OR5T2Q8NGG2 359 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 FAM216AQ8WUB2 273 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 H1FXQ92522 213 aaKnown RBP5.3□□□□□ -1.56
TCF4-249ENST00000625716 UPRTQ96BW1 309 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 RCC1LQ96I51 464 aaKnown RBP5.3□□□□□ -1.56
TCF4-249ENST00000625716 DNTTIP1Q9H147 329 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 OR51I2Q9H344 312 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 ZMAT3Q9HA38 289 aaKnown RBP5.3□□□□□ -1.56
TCF4-249ENST00000625716 GPR173Q9NS66 373 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 SNTG1Q9NSN8 517 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 RASL12Q9NYN1 266 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 ONECUT1Q9UBC0 465 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 NLKQ9UBE8 527 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 KAAG1Q9UBP8 84 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 CTSZQ9UBR2 303 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 ZNF69Q9UC07 566 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 SLC22A13Q9Y226 551 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 V9GYS6 101 aa5.3□□□□□ -1.56
TCF4-249ENST00000625716 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.3□□□□□ -1.56
TCF4-249ENST00000625716 TRAV40A0A0B4J280 105 aa5.29□□□□□ -1.56
TCF4-249ENST00000625716 LOC100130705A0A1B0GUX0 176 aa5.29□□□□□ -1.56
TCF4-249ENST00000625716 FAM230AA0A1W2PPH8 454 aa5.29□□□□□ -1.56
TCF4-249ENST00000625716 A0A1W2PQ09 198 aa5.29□□□□□ -1.56
TCF4-249ENST00000625716 A6NIN4 97 aa5.29□□□□□ -1.56
TCF4-249ENST00000625716 OR2AT4A6NND4 320 aa5.29□□□□□ -1.56
TCF4-249ENST00000625716 C22orf46C9J442 243 aa5.29□□□□□ -1.56
TCF4-249ENST00000625716 J3QLW9 94 aa5.29□□□□□ -1.56
TCF4-249ENST00000625716 TNFRSF13BO14836 293 aaPredicted RBP5.29□□□□□ -1.56
TCF4-249ENST00000625716 SRSF10O75494 262 aaKnown RBP5.29□□□□□ -1.56
TCF4-249ENST00000625716 GATBO75879 557 aaKnown RBP5.29□□□□□ -1.56
TCF4-249ENST00000625716 FADS2O95864 444 aaKnown RBP5.29□□□□□ -1.56
TCF4-249ENST00000625716 IGLV3-1P01715 115 aa5.29□□□□□ -1.56
TCF4-249ENST00000625716 HTR1AP08908 422 aa5.29□□□□□ -1.56
TCF4-249ENST00000625716 UBCP0CG48 685 aaKnown RBP5.29□□□□□ -1.56
TCF4-249ENST00000625716 IGHV4-38-2P0DP08 117 aa5.29□□□□□ -1.56
TCF4-249ENST00000625716 ZNF19P17023 458 aa5.29□□□□□ -1.56
TCF4-249ENST00000625716 NDUFB7P17568 137 aa5.29□□□□□ -1.56
TCF4-249ENST00000625716 HAAOP46952 286 aa5.29□□□□□ -1.56
TCF4-249ENST00000625716 ARF6P62330 175 aa5.29□□□□□ -1.56
TCF4-249ENST00000625716 ACTA2P62736 377 aa5.29□□□□□ -1.56
TCF4-249ENST00000625716 ACTG2P63267 376 aa5.29□□□□□ -1.56
TCF4-249ENST00000625716 IL13RA1P78552 427 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms