RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 ATP6V1G2-DDX39BF2Z307 99 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 PRRG2O14669 202 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 TIMM8AO60220 97 aaPredicted RBP9.08□□□□□ -0.96
VPS11-208ENST00000621676 RAF1P04049 648 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 CYC1P08574 325 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 PRKACAP17612 351 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 BCL3P20749 454 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 MPGP29372 298 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 ID4P47928 161 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 RBP2P50120 134 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 RNPS1Q15287 305 aaKnown RBP9.08□□□□□ -0.96
VPS11-208ENST00000621676 SP6Q3SY56 376 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 TFAP2EQ6VUC0 442 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 WDFY2Q96P53 400 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 PRRX2Q99811 253 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 MOV10Q9HCE1 1003 aaKnown RBP9.08□□□□□ -0.96
VPS11-208ENST00000621676 SLC7A11Q9UPY5 501 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 FAM215AQ9Y5M1 114 aa9.08□□□□□ -0.96
VPS11-208ENST00000621676 YLPM1P49750 1951 aaKnown RBP9.07□□□□□ -0.96
VPS11-208ENST00000621676 IGHV3OR15-7A0A075B7D8 119 aa9.07□□□□□ -0.96
VPS11-208ENST00000621676 PTTG1O95997 202 aa9.07□□□□□ -0.96
VPS11-208ENST00000621676 C1QTNF12Q5T7M4 302 aa9.07□□□□□ -0.96
VPS11-208ENST00000621676 RTL6Q6ICC9 239 aa9.07□□□□□ -0.96
VPS11-208ENST00000621676 STEAP1BQ6NZ63 245 aa9.07□□□□□ -0.96
VPS11-208ENST00000621676 ZNF474Q6S9Z5 364 aaPredicted RBP9.07□□□□□ -0.96
VPS11-208ENST00000621676 SLC22A25Q6T423 547 aa9.07□□□□□ -0.96
VPS11-208ENST00000621676 OR1K1Q8NGR3 316 aa9.07□□□□□ -0.96
VPS11-208ENST00000621676 NEUROG1Q92886 237 aa9.07□□□□□ -0.96
VPS11-208ENST00000621676 STARD4Q96DR4 205 aa9.07□□□□□ -0.96
VPS11-208ENST00000621676 NARFLQ9H6Q4 476 aa9.07□□□□□ -0.96
VPS11-208ENST00000621676 A3GALT2U3KPV4 340 aa9.07□□□□□ -0.96
VPS11-208ENST00000621676 OR6C6A6NF89 314 aa9.07□□□□□ -0.96
VPS11-208ENST00000621676 TNFSF12O43508 249 aa9.07□□□□□ -0.96
VPS11-208ENST00000621676 LY6HO94772 140 aa9.07□□□□□ -0.96
VPS11-208ENST00000621676 CST2P09228 141 aa9.07□□□□□ -0.96
VPS11-208ENST00000621676 AMY2BP19961 511 aa9.07□□□□□ -0.96
VPS11-208ENST00000621676 PCBD1P61457 104 aa9.07□□□□□ -0.96
VPS11-208ENST00000621676 PITPNAQ00169 270 aa9.07□□□□□ -0.96
VPS11-208ENST00000621676 EDDM3AQ14507 147 aa9.07□□□□□ -0.96
VPS11-208ENST00000621676 SPRNQ5BIV9 151 aa9.07□□□□□ -0.96
VPS11-208ENST00000621676 DRAM2Q6UX65 266 aa9.07□□□□□ -0.96
VPS11-208ENST00000621676 OR6S1Q8NH40 331 aa9.07□□□□□ -0.96
VPS11-208ENST00000621676 SMIM4Q8WVI0 70 aa9.07□□□□□ -0.96
VPS11-208ENST00000621676 SLC17A5Q9NRA2 495 aa9.07□□□□□ -0.96
VPS11-208ENST00000621676 LOC102725191A0A1B0GVB3 256 aa9.06□□□□□ -0.96
VPS11-208ENST00000621676 B8ZZF3 427 aa9.06□□□□□ -0.96
VPS11-208ENST00000621676 XRCC3O43542 346 aa9.06□□□□□ -0.96
VPS11-208ENST00000621676 CCL8P80075 99 aa9.06□□□□□ -0.96
VPS11-208ENST00000621676 HNF4GQ14541 408 aa9.06□□□□□ -0.96
VPS11-208ENST00000621676 ST3GAL2Q16842 350 aa9.06□□□□□ -0.96
VPS11-208ENST00000621676 DEGS2Q6QHC5 323 aa9.06□□□□□ -0.96
VPS11-208ENST00000621676 OR2Z1Q8NG97 314 aa9.06□□□□□ -0.96
VPS11-208ENST00000621676 OR52H1Q8NGJ2 320 aa9.06□□□□□ -0.96
VPS11-208ENST00000621676 MARCH1Q8TCQ1 289 aa9.06□□□□□ -0.96
VPS11-208ENST00000621676 SLC25A28Q96A46 364 aa9.06□□□□□ -0.96
VPS11-208ENST00000621676 LPAR5Q9H1C0 372 aa9.06□□□□□ -0.96
VPS11-208ENST00000621676 DCAF16Q9NXF7 216 aa9.06□□□□□ -0.96
VPS11-208ENST00000621676 CECR9P0C854 216 aa9.06□□□□□ -0.96
VPS11-208ENST00000621676 BTCP35070 178 aa9.06□□□□□ -0.96
VPS11-208ENST00000621676 ZFP69Q49AA0 526 aa9.06□□□□□ -0.96
VPS11-208ENST00000621676 PHLDA2Q53GA4 152 aa9.06□□□□□ -0.96
VPS11-208ENST00000621676 RNASE10Q5GAN6 216 aaKnown RBP9.06□□□□□ -0.96
VPS11-208ENST00000621676 AGAP6Q5VW22 663 aa9.06□□□□□ -0.96
VPS11-208ENST00000621676 DOLPP1Q86YN1 238 aa9.06□□□□□ -0.96
VPS11-208ENST00000621676 SLC7A5P1Q8MH63 180 aa9.06□□□□□ -0.96
VPS11-208ENST00000621676 GALNT11Q8NCW6 608 aa9.06□□□□□ -0.96
VPS11-208ENST00000621676 GSKIPQ9P0R6 139 aa9.06□□□□□ -0.96
VPS11-208ENST00000621676 RBM7Q9Y580 266 aaKnown RBP9.06□□□□□ -0.96
VPS11-208ENST00000621676 ISPDA4D126 451 aa9.06□□□□□ -0.96
VPS11-208ENST00000621676 CRYGSP22914 178 aa9.06□□□□□ -0.96
VPS11-208ENST00000621676 OMGP23515 440 aa9.06□□□□□ -0.96
VPS11-208ENST00000621676 ERVFRD-1P60508 538 aa9.06□□□□□ -0.96
VPS11-208ENST00000621676 C2orf68Q2NKX9 166 aa9.06□□□□□ -0.96
VPS11-208ENST00000621676 ASCC1Q8N9N2 400 aaKnown RBP9.06□□□□□ -0.96
VPS11-208ENST00000621676 Q8NA96 180 aa9.06□□□□□ -0.96
VPS11-208ENST00000621676 ADPRHL1Q8NDY3 354 aa9.06□□□□□ -0.96
VPS11-208ENST00000621676 C20orf85Q9H1P6 137 aa9.06□□□□□ -0.96
VPS11-208ENST00000621676 EHFQ9NZC4 300 aa9.06□□□□□ -0.96
VPS11-208ENST00000621676 KMT2EQ8IZD2 1858 aa9.06□□□□□ -0.96
VPS11-208ENST00000621676 CREBBPQ92793 2442 aa9.05□□□□□ -0.96
VPS11-208ENST00000621676 FIGNL2A6NMB9 653 aa9.05□□□□□ -0.96
VPS11-208ENST00000621676 GABRA2P47869 451 aa9.05□□□□□ -0.96
VPS11-208ENST00000621676 PPP1CBP62140 327 aa9.05□□□□□ -0.96
VPS11-208ENST00000621676 CDSNQ15517 529 aa9.05□□□□□ -0.96
VPS11-208ENST00000621676 GABRG1Q8N1C3 465 aa9.05□□□□□ -0.96
VPS11-208ENST00000621676 GMPPAQ96IJ6 420 aaPredicted RBP9.05□□□□□ -0.96
VPS11-208ENST00000621676 EIF3KQ9UBQ5 218 aaKnown RBP9.05□□□□□ -0.96
VPS11-208ENST00000621676 ZNF221Q9UK13 617 aa9.05□□□□□ -0.96
VPS11-208ENST00000621676 HSPB11Q9Y547 144 aa9.05□□□□□ -0.96
VPS11-208ENST00000621676 HELZ2Q9BYK8 2649 aaKnown RBP9.05□□□□□ -0.96
VPS11-208ENST00000621676 MEGF11A6BM72 1044 aa9.05□□□□□ -0.96
VPS11-208ENST00000621676 ANKRD30BLA7E2S9 258 aa9.05□□□□□ -0.96
VPS11-208ENST00000621676 DEFB108AA8MXU0 73 aa9.05□□□□□ -0.96
VPS11-208ENST00000621676 FABP7O15540 132 aa9.05□□□□□ -0.96
VPS11-208ENST00000621676 DHFRP00374 187 aa9.05□□□□□ -0.96
VPS11-208ENST00000621676 NAT2P11245 290 aa9.05□□□□□ -0.96
VPS11-208ENST00000621676 ZNF16P17020 682 aaPredicted RBP9.05□□□□□ -0.96
VPS11-208ENST00000621676 IGFBP3P17936 291 aaPredicted RBP9.05□□□□□ -0.96
VPS11-208ENST00000621676 ALDH3B1P43353 468 aa9.05□□□□□ -0.96
VPS11-208ENST00000621676 TAGLNQ01995 201 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms