RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 SOD3P08294 240 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 ACAA1P09110 424 aaPredicted RBP6.8□□□□□ -1.32
CPNE3-209ENST00000620393 BMP4P12644 408 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 ARSBP15848 533 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 TNFSF4P23510 183 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 MPZP25189 248 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 OR3A4PP47883 348 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 SRP9P49458 86 aaKnown RBP6.8□□□□□ -1.32
CPNE3-209ENST00000620393 SNRPD2P62316 118 aaKnown RBP6.8□□□□□ -1.32
CPNE3-209ENST00000620393 QRFPP83859 136 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 TNFAIP6P98066 277 aaPredicted RBP6.8□□□□□ -1.32
CPNE3-209ENST00000620393 IL24Q13007 206 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 ZNF154Q13106 437 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 GPR176Q14439 515 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 PCGF3Q3KNV8 242 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 FAM209AQ5JX71 171 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 AWAT2Q6E213 333 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 HAGHLQ6PII5 290 aaPredicted RBP6.8□□□□□ -1.32
CPNE3-209ENST00000620393 LINC00299Q6ZSB3 139 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 WDR86Q86TI4 376 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 DTX2Q86UW9 622 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 TMEM200AQ86VY9 491 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 MKXQ8IYA7 352 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 ZNF295-AS1Q8N0V1 137 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 ZCCHC24Q8N2G6 241 aaKnown RBP6.8□□□□□ -1.32
CPNE3-209ENST00000620393 SCCPDHQ8NBX0 429 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 OR5D18Q8NGL1 313 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 OR6Q1Q8NGQ2 317 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 OR5H6Q8NGV6 325 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 OR51F2Q8NH61 342 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 TBC1D15Q8TC07 691 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 AQP3Q92482 292 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 ERGIC1Q969X5 290 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 MEGF10Q96KG7 1140 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 C1orf147Q96MC9 270 aaPredicted RBP6.8□□□□□ -1.32
CPNE3-209ENST00000620393 CMTM3Q96MX0 182 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 OR2V2Q96R30 315 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 S100A13Q99584 98 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 METTL9Q9H1A3 318 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 TLNRD1Q9H1K6 362 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 PLEKHF2Q9H8W4 249 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 DYNLRB1Q9NP97 96 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 PCDHB16Q9NRJ7 776 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 FBLN5Q9UBX5 448 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 RAB22AQ9UL26 194 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 PEX16Q9Y5Y5 336 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 ROS1P08922 2347 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 ABCA4P78363 2273 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 IGKV1-12A0A0C4DH73 117 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 TMEM272A0A1B0GTI8 110 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 TMEM14DPA8MWL7 114 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 J3QT63 122 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 SPRY1O43609 319 aaPredicted RBP6.79□□□□□ -1.32
CPNE3-209ENST00000620393 SYNGR1O43759 233 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 ANGPTL7O43827 346 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 NOS1APO75052 506 aaPredicted RBP6.79□□□□□ -1.32
CPNE3-209ENST00000620393 ZNF780AO75290 641 aaPredicted RBP6.79□□□□□ -1.32
CPNE3-209ENST00000620393 CYB5AP00167 134 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 IGKV1D-12P01611 117 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 COL8A1P27658 744 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 CFHR2P36980 270 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 PMELP40967 661 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 GATA4P43694 442 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 POU3F4P49335 361 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 PPOXP50336 477 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 ART1P52961 327 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 MPPED2Q15777 294 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 SLC22A6Q4U2R8 563 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 SPRNQ5BIV9 151 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 PRAMEF6Q5VXH4 476 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 OR10K2Q6IF99 312 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 C11orf71Q6IPW1 123 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 SLC25A26Q70HW3 274 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 OR2W3Q7Z3T1 314 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 CDH24Q86UP0 819 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 Q8NFD4 153 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 KCNG3Q8TAE7 436 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 ITLN1Q8WWA0 313 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 PTX4Q96A99 478 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 C14orf79Q96F83 325 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 TRAF4Q9BUZ4 470 aaPredicted RBP6.79□□□□□ -1.32
CPNE3-209ENST00000620393 EGLN1Q9GZT9 426 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 C6orf62Q9GZU0 229 aaPredicted RBP6.79□□□□□ -1.32
CPNE3-209ENST00000620393 CLEC4MQ9H2X3 399 aaPredicted RBP6.79□□□□□ -1.32
CPNE3-209ENST00000620393 UBTD1Q9HAC8 227 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 SMURF1Q9HCE7 757 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 DECR2Q9NUI1 292 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 IL36GQ9NZH8 169 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 MTCH1Q9NZJ7 389 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 POLDIP2Q9Y2S7 368 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 ETV7Q9Y603 341 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 FLNCQ14315 2725 aa6.79□□□□□ -1.32
CPNE3-209ENST00000620393 IGHV3-64DA0A0J9YX35 117 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 A6NLC8 198 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 TRAPPC2LH3BP13 241 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 RGS5O15539 181 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 HPGDSO60760 199 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 RHBDL1O75783 438 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 KDM4BO94953 1096 aa6.78□□□□□ -1.32
CPNE3-209ENST00000620393 HTR3BO95264 441 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms