RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 PCGF3Q3KNV8 242 aa18.48■□□□□ 0.55
USP6NL-204ENST00000606752 PLA1AQ53H76 456 aa18.48■□□□□ 0.55
USP6NL-204ENST00000606752 PLAC9Q5JTB6 97 aa18.48■□□□□ 0.55
USP6NL-204ENST00000606752 SLC25A26Q70HW3 274 aa18.48■□□□□ 0.55
USP6NL-204ENST00000606752 DVL3Q92997 716 aaPredicted RBP18.48■□□□□ 0.55
USP6NL-204ENST00000606752 OR10A4Q9H209 315 aa18.48■□□□□ 0.55
USP6NL-204ENST00000606752 ATRXP46100 2492 aa18.48■□□□□ 0.55
USP6NL-204ENST00000606752 MEIS3P1A6NDR6 274 aa18.47■□□□□ 0.55
USP6NL-204ENST00000606752 NAP1L6A6NFF2 107 aa18.47■□□□□ 0.55
USP6NL-204ENST00000606752 CRYAAP02489 173 aa18.47■□□□□ 0.55
USP6NL-204ENST00000606752 MT-ND4P03905 459 aa18.47■□□□□ 0.55
USP6NL-204ENST00000606752 GSTP1P09211 210 aaKnown RBP18.47■□□□□ 0.55
USP6NL-204ENST00000606752 CSF1P09603 554 aa18.47■□□□□ 0.55
USP6NL-204ENST00000606752 HIST1H1DP16402 221 aaKnown RBP18.47■□□□□ 0.55
USP6NL-204ENST00000606752 GNG3P63215 75 aa18.47■□□□□ 0.55
USP6NL-204ENST00000606752 ZNF718Q3SXZ3 478 aa18.47■□□□□ 0.55
USP6NL-204ENST00000606752 GLCCI1Q86VQ1 547 aa18.47■□□□□ 0.55
USP6NL-204ENST00000606752 SAXO1Q8IYX7 474 aa18.47■□□□□ 0.55
USP6NL-204ENST00000606752 CADM3Q8N126 398 aa18.47■□□□□ 0.55
USP6NL-204ENST00000606752 MRPS24Q96EL2 167 aaKnown RBP18.47■□□□□ 0.55
USP6NL-204ENST00000606752 Q96M66 194 aa18.47■□□□□ 0.55
USP6NL-204ENST00000606752 OSGIN2Q9Y236 505 aa18.47■□□□□ 0.55
USP6NL-204ENST00000606752 NOP16Q9Y3C1 178 aaKnown RBP18.47■□□□□ 0.55
USP6NL-204ENST00000606752 TPRP12270 2363 aaKnown RBP18.47■□□□□ 0.55
USP6NL-204ENST00000606752 FOXI3A8MTJ6 420 aaPredicted RBP18.46■□□□□ 0.55
USP6NL-204ENST00000606752 ALKBH6Q3KRA9 238 aa18.46■□□□□ 0.55
USP6NL-204ENST00000606752 TMEM255AQ5JRV8 349 aa18.46■□□□□ 0.55
USP6NL-204ENST00000606752 PCSK4Q6UW60 755 aa18.46■□□□□ 0.55
USP6NL-204ENST00000606752 C22orf34Q6ZV56 151 aa18.46■□□□□ 0.55
USP6NL-204ENST00000606752 DPAGT1Q9H3H5 408 aa18.46■□□□□ 0.55
USP6NL-204ENST00000606752 PURGQ9UJV8 347 aaKnown RBP18.46■□□□□ 0.55
USP6NL-204ENST00000606752 KCNK7Q9Y2U2 307 aa18.46■□□□□ 0.55
USP6NL-204ENST00000606752 SPEF1Q9Y4P9 236 aa18.46■□□□□ 0.55
USP6NL-204ENST00000606752 BLVRBP30043 206 aaPredicted RBP18.46■□□□□ 0.55
USP6NL-204ENST00000606752 MBNL2Q5VZF2 373 aaKnown RBP18.46■□□□□ 0.55
USP6NL-204ENST00000606752 FJX1Q86VR8 437 aa18.46■□□□□ 0.55
USP6NL-204ENST00000606752 TMEM200AQ86VY9 491 aa18.46■□□□□ 0.55
USP6NL-204ENST00000606752 ZNF573Q86YE8 665 aa18.46■□□□□ 0.55
USP6NL-204ENST00000606752 CACNG6Q9BXT2 260 aa18.46■□□□□ 0.55
USP6NL-204ENST00000606752 SHANK1Q9Y566 2161 aa18.45■□□□□ 0.54
USP6NL-204ENST00000606752 SFTPBP07988 381 aa18.45■□□□□ 0.54
USP6NL-204ENST00000606752 KITLGP21583 273 aa18.45■□□□□ 0.54
USP6NL-204ENST00000606752 GIFP27352 417 aa18.45■□□□□ 0.54
USP6NL-204ENST00000606752 GCH1P30793 250 aa18.45■□□□□ 0.54
USP6NL-204ENST00000606752 OLFML2AQ68BL7 652 aa18.45■□□□□ 0.54
USP6NL-204ENST00000606752 SEZ6L2Q6UXD5 910 aa18.45■□□□□ 0.54
USP6NL-204ENST00000606752 SSX8Q7RTT4 187 aa18.45■□□□□ 0.54
USP6NL-204ENST00000606752 MKXQ8IYA7 352 aa18.45■□□□□ 0.54
USP6NL-204ENST00000606752 OSR2Q8N2R0 312 aa18.45■□□□□ 0.54
USP6NL-204ENST00000606752 Q8NFD4 153 aa18.45■□□□□ 0.54
USP6NL-204ENST00000606752 OR8S1Q8NH09 359 aa18.45■□□□□ 0.54
USP6NL-204ENST00000606752 ARHGAP5-AS1Q96IT6 56 aa18.45■□□□□ 0.54
USP6NL-204ENST00000606752 MICU1Q9BPX6 476 aa18.45■□□□□ 0.54
USP6NL-204ENST00000606752 MARVELD1Q9BSK0 173 aa18.45■□□□□ 0.54
USP6NL-204ENST00000606752 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.45■□□□□ 0.542e-6■■□□□ 13.9
USP6NL-204ENST00000606752 COPZ2Q9P299 210 aa18.45■□□□□ 0.54
USP6NL-204ENST00000606752 ZNF107Q9UII5 783 aaPredicted RBP18.45■□□□□ 0.54
USP6NL-204ENST00000606752 CCL21O00585 134 aa18.44■□□□□ 0.54
USP6NL-204ENST00000606752 MFNGO00587 321 aa18.44■□□□□ 0.54
USP6NL-204ENST00000606752 AKR7A2O43488 359 aa18.44■□□□□ 0.54
USP6NL-204ENST00000606752 CYB5AP00167 134 aa18.44■□□□□ 0.54
USP6NL-204ENST00000606752 FAUP35544 74 aaKnown RBP18.44■□□□□ 0.54
USP6NL-204ENST00000606752 FABP6P51161 128 aa18.44■□□□□ 0.54
USP6NL-204ENST00000606752 ARL6IP1Q15041 203 aa18.44■□□□□ 0.54
USP6NL-204ENST00000606752 PNLIPRP3Q17RR3 467 aa18.44■□□□□ 0.54
USP6NL-204ENST00000606752 OR8G5Q8NG78 346 aa18.44■□□□□ 0.54
USP6NL-204ENST00000606752 RTL8AQ9BWD3 113 aa18.44■□□□□ 0.54
USP6NL-204ENST00000606752 PCNX1Q96RV3 2341 aa18.44■□□□□ 0.54
USP6NL-204ENST00000606752 RGS7BPQ6MZT1 257 aaPredicted RBP18.44■□□□□ 0.54
USP6NL-204ENST00000606752 TRAPPC6BQ86SZ2 158 aa18.44■□□□□ 0.54
USP6NL-204ENST00000606752 RTN4RL2Q86UN3 420 aa18.44■□□□□ 0.54
USP6NL-204ENST00000606752 TMEM229BQ8NBD8 167 aa18.44■□□□□ 0.54
USP6NL-204ENST00000606752 NUDCD2Q8WVJ2 157 aa18.44■□□□□ 0.54
USP6NL-204ENST00000606752 CREB3L1Q96BA8 519 aa18.44■□□□□ 0.54
USP6NL-204ENST00000606752 UPRTQ96BW1 309 aa18.44■□□□□ 0.54
USP6NL-204ENST00000606752 POM121Q96HA1 1249 aa18.44■□□□□ 0.54
USP6NL-204ENST00000606752 TMEM100Q9NV29 134 aa18.44■□□□□ 0.54
USP6NL-204ENST00000606752 TCRBP04435 133 aa18.43■□□□□ 0.54
USP6NL-204ENST00000606752 GABRR1P24046 479 aa18.43■□□□□ 0.54
USP6NL-204ENST00000606752 GNG2P59768 71 aa18.43■□□□□ 0.54
USP6NL-204ENST00000606752 TAF9Q16594 264 aa18.43■□□□□ 0.54
USP6NL-204ENST00000606752 FAM76BQ5HYJ3 339 aa18.43■□□□□ 0.54
USP6NL-204ENST00000606752 RSBN1Q5VWQ0 802 aaPredicted RBP18.43■□□□□ 0.54
USP6NL-204ENST00000606752 FBXL14Q8N1E6 418 aa18.43■□□□□ 0.54
USP6NL-204ENST00000606752 ADAT1Q9BUB4 502 aaKnown RBP18.43■□□□□ 0.54
USP6NL-204ENST00000606752 PECRQ9BY49 303 aa18.43■□□□□ 0.54
USP6NL-204ENST00000606752 OR51I2Q9H344 312 aa18.43■□□□□ 0.54
USP6NL-204ENST00000606752 TIMM8AO60220 97 aaPredicted RBP18.42■□□□□ 0.54
USP6NL-204ENST00000606752 AKAIN1P0CW23 69 aa18.42■□□□□ 0.54
USP6NL-204ENST00000606752 NPBWR2P48146 333 aa18.42■□□□□ 0.54
USP6NL-204ENST00000606752 CCR6P51684 374 aa18.42■□□□□ 0.54
USP6NL-204ENST00000606752 TAS2R19P59542 299 aa18.42■□□□□ 0.54
USP6NL-204ENST00000606752 ELP2Q6IA86 826 aa18.42■□□□□ 0.54
USP6NL-204ENST00000606752 HAGHLQ6PII5 290 aaPredicted RBP18.42■□□□□ 0.54
USP6NL-204ENST00000606752 SLAMF9Q96A28 289 aa18.42■□□□□ 0.54
USP6NL-204ENST00000606752 PKIBQ9C010 78 aa18.42■□□□□ 0.54
USP6NL-204ENST00000606752 HEATR1Q9H583 2144 aaKnown RBP18.42■□□□□ 0.54
USP6NL-204ENST00000606752 MCUBQ9NWR8 336 aa18.42■□□□□ 0.54
USP6NL-204ENST00000606752 ST3GAL6Q9Y274 331 aa18.42■□□□□ 0.54
USP6NL-204ENST00000606752 NUBP2Q9Y5Y2 271 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms