RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 ZNF610Q8N9Z0 462 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 OR5M8Q8NGP6 311 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 OR8S1Q8NH09 359 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 OR1F12Q8NHA8 337 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 FGFBP3Q8TAT2 258 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 NANOS1Q8WY41 292 aaKnown RBP10.14□□□□□ -0.79
VRK3-223ENST00000601341 ADAT3Q96EY9 351 aaPredicted RBP10.14□□□□□ -0.79
VRK3-223ENST00000601341 DHRS9Q9BPW9 319 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 OPN3Q9H1Y3 402 aaPredicted RBP10.14□□□□□ -0.79
VRK3-223ENST00000601341 KCNK15Q9H427 330 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 ATPIF1Q9UII2 106 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 SH3BGRL2Q9UJC5 107 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 DOCK7Q96N67 2140 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 FREM1Q5H8C1 2179 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 A0A1B0GW55 424 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 OR6C6A6NF89 314 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 TMEM235A6NFC5 223 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 CEACAM18A8MTB9 384 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 B8ZZF3 427 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 E9PLN8 166 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 SYNGR3O43761 229 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 HLA-HP01893 362 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 DUX4L2P0CJ85 424 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 DUX4L3P0CJ86 424 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 DUX4L4P0CJ87 422 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 DUX4L5P0CJ88 424 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 DUX4L6P0CJ89 424 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 DUX4L7P0CJ90 424 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 VSIG8P0DPA2 414 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 HOXB1P14653 301 aaPredicted RBP10.14□□□□□ -0.79
VRK3-223ENST00000601341 COX5AP20674 150 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 OTX1P32242 354 aaPredicted RBP10.14□□□□□ -0.79
VRK3-223ENST00000601341 ZNF93P35789 620 aaPredicted RBP10.14□□□□□ -0.79
VRK3-223ENST00000601341 CBX5P45973 191 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 HTR5AP47898 357 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 DHRS2Q13268 280 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 UNC119Q13432 240 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 ARL6IP1Q15041 203 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 AANATQ16613 207 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 HIKESHIQ53FT3 197 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 SIGIRRQ6IA17 410 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 TMEM211Q6ICI0 200 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 C1orf162Q8NEQ5 155 aaPredicted RBP10.14□□□□□ -0.79
VRK3-223ENST00000601341 OR52N4Q8NGI2 321 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 OR13C8Q8NGS7 320 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 OR10R2Q8NGX6 335 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 AKR7LQ8NHP1 331 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 DVL3Q92997 716 aaPredicted RBP10.14□□□□□ -0.79
VRK3-223ENST00000601341 BOD1Q96IK1 185 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 CNTNAP3BQ96NU0 1288 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 VKORC1Q9BQB6 163 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 CNTNAP3Q9BZ76 1288 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 TINAGL1Q9GZM7 467 aaPredicted RBP10.14□□□□□ -0.79
VRK3-223ENST00000601341 WNT5BQ9H1J7 359 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.14□□□□□ -0.79
VRK3-223ENST00000601341 ZNF224Q9NZL3 707 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 DUX4Q9UBX2 424 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 ZNF629Q9UEG4 869 aaPredicted RBP10.14□□□□□ -0.79
VRK3-223ENST00000601341 TRGV8A0A0C4DH27 118 aa10.13□□□□□ -0.79
VRK3-223ENST00000601341 A0A0U1RQV5 110 aa10.13□□□□□ -0.79
VRK3-223ENST00000601341 F5H5K5 113 aa10.13□□□□□ -0.79
VRK3-223ENST00000601341 ARPC5O15511 151 aa10.13□□□□□ -0.79
VRK3-223ENST00000601341 RAD51DO75771 328 aa10.13□□□□□ -0.79
VRK3-223ENST00000601341 LYZL6O75951 148 aa10.13□□□□□ -0.79
VRK3-223ENST00000601341 OR2F2O95006 317 aa10.13□□□□□ -0.79
VRK3-223ENST00000601341 IGLV3-1P01715 115 aa10.13□□□□□ -0.79
VRK3-223ENST00000601341 CD79AP11912 226 aa10.13□□□□□ -0.79
VRK3-223ENST00000601341 CRYGSP22914 178 aa10.13□□□□□ -0.79
VRK3-223ENST00000601341 CX3CR1P49238 355 aa10.13□□□□□ -0.79
VRK3-223ENST00000601341 ZNF121P58317 390 aaPredicted RBP10.13□□□□□ -0.79
VRK3-223ENST00000601341 TAS2R31P59538 309 aa10.13□□□□□ -0.79
VRK3-223ENST00000601341 RAB1AP62820 205 aa10.13□□□□□ -0.79
VRK3-223ENST00000601341 OR2F1Q13607 317 aa10.13□□□□□ -0.79
VRK3-223ENST00000601341 GABRA6Q16445 453 aa10.13□□□□□ -0.79
VRK3-223ENST00000601341 MOGAT2Q3SYC2 334 aa10.13□□□□□ -0.79
VRK3-223ENST00000601341 CDNFQ49AH0 187 aa10.13□□□□□ -0.79
VRK3-223ENST00000601341 PABPC1L2AQ5JQF8 200 aa10.13□□□□□ -0.79
VRK3-223ENST00000601341 LY6G6FQ5SQ64 297 aa10.13□□□□□ -0.79
VRK3-223ENST00000601341 GSG1LQ6UXU4 331 aa10.13□□□□□ -0.79
VRK3-223ENST00000601341 LYG2Q86SG7 212 aa10.13□□□□□ -0.79
VRK3-223ENST00000601341 FJX1Q86VR8 437 aa10.13□□□□□ -0.79
VRK3-223ENST00000601341 EIF4E3Q8N5X7 224 aaKnown RBP10.13□□□□□ -0.79
VRK3-223ENST00000601341 SUN5Q8TC36 379 aa10.13□□□□□ -0.79
VRK3-223ENST00000601341 SSC4DQ8WTU2 575 aa10.13□□□□□ -0.79
VRK3-223ENST00000601341 MITD1Q8WV92 249 aa10.13□□□□□ -0.79
VRK3-223ENST00000601341 SLC6A7Q99884 636 aa10.13□□□□□ -0.79
VRK3-223ENST00000601341 ARL6Q9H0F7 186 aa10.13□□□□□ -0.79
VRK3-223ENST00000601341 PIGMQ9H3S5 423 aa10.13□□□□□ -0.79
VRK3-223ENST00000601341 A0A0G2JNJ9 132 aa10.12□□□□□ -0.79
VRK3-223ENST00000601341 hCG_1807616A0A1W2PRN6 198 aa10.12□□□□□ -0.79
VRK3-223ENST00000601341 MEIS3P1A6NDR6 274 aa10.12□□□□□ -0.79
VRK3-223ENST00000601341 I3L521 148 aa10.12□□□□□ -0.79
VRK3-223ENST00000601341 M0R135 149 aa10.12□□□□□ -0.79
VRK3-223ENST00000601341 MSTNO14793 375 aa10.12□□□□□ -0.79
VRK3-223ENST00000601341 MGMTP16455 207 aa10.12□□□□□ -0.79
VRK3-223ENST00000601341 ZBTB25P24278 435 aa10.12□□□□□ -0.79
VRK3-223ENST00000601341 HOXC12P31275 282 aa10.12□□□□□ -0.79
VRK3-223ENST00000601341 CA7P43166 264 aa10.12□□□□□ -0.79
VRK3-223ENST00000601341 SLC6A9P48067 706 aa10.12□□□□□ -0.79
VRK3-223ENST00000601341 UBE2NP61088 152 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms