RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 RIPPLY1Q0D2K3 151 aa13.83□□□□□ -0.2
PNKP-210ENST00000597965 SLC35D3Q5M8T2 416 aa13.83□□□□□ -0.2
PNKP-210ENST00000597965 DEGS2Q6QHC5 323 aa13.83□□□□□ -0.2
PNKP-210ENST00000597965 COMMD2Q86X83 199 aa13.83□□□□□ -0.2
PNKP-210ENST00000597965 CALHM1Q8IU99 346 aa13.83□□□□□ -0.2
PNKP-210ENST00000597965 OR4F17Q8NGA8 305 aa13.83□□□□□ -0.2
PNKP-210ENST00000597965 OR10G2Q8NGC3 310 aa13.83□□□□□ -0.2
PNKP-210ENST00000597965 OR8B12Q8NGG6 310 aa13.83□□□□□ -0.2
PNKP-210ENST00000597965 OR4F4Q96R69 305 aa13.83□□□□□ -0.2
PNKP-210ENST00000597965 MROQ9BYG7 248 aa13.83□□□□□ -0.2
PNKP-210ENST00000597965 LAMP5Q9UJQ1 280 aa13.83□□□□□ -0.2
PNKP-210ENST00000597965 ZNF222Q9UK12 451 aa13.83□□□□□ -0.2
PNKP-210ENST00000597965 FOXJ3Q9UPW0 622 aa13.83□□□□□ -0.2
PNKP-210ENST00000597965 VGLL3A8MV65 326 aa13.82□□□□□ -0.2
PNKP-210ENST00000597965 CASQ2O14958 399 aaPredicted RBP13.82□□□□□ -0.2
PNKP-210ENST00000597965 PEX14O75381 377 aa13.82□□□□□ -0.2
PNKP-210ENST00000597965 MTRF1O75570 445 aaKnown RBP13.82□□□□□ -0.2
PNKP-210ENST00000597965 RHBDL1O75783 438 aa13.82□□□□□ -0.2
PNKP-210ENST00000597965 FAHP16930 419 aa13.82□□□□□ -0.2
PNKP-210ENST00000597965 PPP1R8Q12972 351 aaKnown RBP13.82□□□□□ -0.2
PNKP-210ENST00000597965 HCP5Q6MZN7 132 aa13.82□□□□□ -0.2
PNKP-210ENST00000597965 PLBD1Q6P4A8 553 aa13.82□□□□□ -0.2
PNKP-210ENST00000597965 CRIP3Q6Q6R5 217 aa13.82□□□□□ -0.2
PNKP-210ENST00000597965 MKXQ8IYA7 352 aa13.82□□□□□ -0.2
PNKP-210ENST00000597965 PQLC1Q8N2U9 271 aa13.82□□□□□ -0.2
PNKP-210ENST00000597965 C11orf44Q8N8P7 122 aa13.82□□□□□ -0.2
PNKP-210ENST00000597965 GIPC3Q8TF64 312 aa13.82□□□□□ -0.2
PNKP-210ENST00000597965 AQP3Q92482 292 aa13.82□□□□□ -0.2
PNKP-210ENST00000597965 FOXRED1Q96CU9 486 aaPredicted RBP13.82□□□□□ -0.2
PNKP-210ENST00000597965 LYZL4Q96KX0 146 aa13.82□□□□□ -0.2
PNKP-210ENST00000597965 YY1AP1Q9H869 796 aa13.82□□□□□ -0.2
PNKP-210ENST00000597965 ABCB10Q9NRK6 738 aa13.82□□□□□ -0.2
PNKP-210ENST00000597965 POLDIP2Q9Y2S7 368 aa13.82□□□□□ -0.2
PNKP-210ENST00000597965 SIGLEC9Q9Y336 463 aa13.82□□□□□ -0.2
PNKP-210ENST00000597965 LRRC42Q9Y546 428 aa13.82□□□□□ -0.2
PNKP-210ENST00000597965 AP4S1Q9Y587 144 aa13.82□□□□□ -0.2
PNKP-210ENST00000597965 TMEM269A0A1B0GVZ9 245 aa13.81□□□□□ -0.2
PNKP-210ENST00000597965 SELENOFO60613 162 aa13.81□□□□□ -0.2
PNKP-210ENST00000597965 FBXO24O75426 580 aa13.81□□□□□ -0.2
PNKP-210ENST00000597965 HOXB6P17509 224 aaKnown RBP13.81□□□□□ -0.2
PNKP-210ENST00000597965 RPS7P62081 194 aaKnown RBP13.81□□□□□ -0.2
PNKP-210ENST00000597965 CEP78Q5JTW2 689 aa13.81□□□□□ -0.2
PNKP-210ENST00000597965 ZNF684Q5T5D7 378 aa13.81□□□□□ -0.2
PNKP-210ENST00000597965 HAGHLQ6PII5 290 aaPredicted RBP13.81□□□□□ -0.2
PNKP-210ENST00000597965 ACP7Q6ZNF0 438 aa13.81□□□□□ -0.2
PNKP-210ENST00000597965 NDUFA11Q86Y39 141 aa13.81□□□□□ -0.2
PNKP-210ENST00000597965 ZNF573Q86YE8 665 aa13.81□□□□□ -0.2
PNKP-210ENST00000597965 ADGRG5Q8IZF4 528 aa13.81□□□□□ -0.2
PNKP-210ENST00000597965 C17orf50Q8WW18 174 aa13.81□□□□□ -0.2
PNKP-210ENST00000597965 RORBQ92753 470 aa13.81□□□□□ -0.2
PNKP-210ENST00000597965 FEVQ99581 238 aa13.81□□□□□ -0.2
PNKP-210ENST00000597965 NKX3-1Q99801 234 aaPredicted RBP13.81□□□□□ -0.2
PNKP-210ENST00000597965 NIPSNAP1Q9BPW8 284 aa13.81□□□□□ -0.2
PNKP-210ENST00000597965 ZNF556Q9HAH1 456 aa13.81□□□□□ -0.2
PNKP-210ENST00000597965 ELL3Q9HB65 397 aaPredicted RBP13.81□□□□□ -0.2
PNKP-210ENST00000597965 C19orf12Q9NSK7 152 aa13.81□□□□□ -0.2
PNKP-210ENST00000597965 ENPP5Q9UJA9 477 aa13.81□□□□□ -0.2
PNKP-210ENST00000597965 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.81□□□□□ -0.2
PNKP-210ENST00000597965 TMEM14AQ9Y6G1 99 aa13.81□□□□□ -0.2
PNKP-210ENST00000597965 RFPL4AA6NLU0 287 aa13.8□□□□□ -0.2
PNKP-210ENST00000597965 RFPL4AL1F8VTS6 287 aa13.8□□□□□ -0.2
PNKP-210ENST00000597965 ZNF254O75437 659 aa13.8□□□□□ -0.2
PNKP-210ENST00000597965 ALDOBP05062 364 aa13.8□□□□□ -0.2
PNKP-210ENST00000597965 RAP2AP10114 183 aa13.8□□□□□ -0.2
PNKP-210ENST00000597965 ALOX5APP20292 161 aa13.8□□□□□ -0.2
PNKP-210ENST00000597965 LOXL3P58215 753 aa13.8□□□□□ -0.2
PNKP-210ENST00000597965 PLCXD3Q63HM9 321 aa13.8□□□□□ -0.2
PNKP-210ENST00000597965 TMEM200BQ69YZ2 307 aa13.8□□□□□ -0.2
PNKP-210ENST00000597965 Q6ZPA2 131 aa13.8□□□□□ -0.2
PNKP-210ENST00000597965 IQCF1Q8N6M8 205 aa13.8□□□□□ -0.2
PNKP-210ENST00000597965 POC1AQ8NBT0 407 aa13.8□□□□□ -0.2
PNKP-210ENST00000597965 OR2T27Q8NH04 317 aa13.8□□□□□ -0.2
PNKP-210ENST00000597965 MRAPQ8TCY5 172 aa13.8□□□□□ -0.2
PNKP-210ENST00000597965 CANT1Q8WVQ1 401 aa13.8□□□□□ -0.2
PNKP-210ENST00000597965 AJUBAQ96IF1 538 aa13.8□□□□□ -0.2
PNKP-210ENST00000597965 YIPF3Q9GZM5 350 aa13.8□□□□□ -0.2
PNKP-210ENST00000597965 NECAP2Q9NVZ3 263 aa13.8□□□□□ -0.2
PNKP-210ENST00000597965 TBL2Q9Y4P3 447 aaKnown RBP13.8□□□□□ -0.2
PNKP-210ENST00000597965 E2F6O75461 281 aa13.79□□□□□ -0.2
PNKP-210ENST00000597965 RBP4P02753 201 aa13.79□□□□□ -0.2
PNKP-210ENST00000597965 TFF1P04155 84 aa13.79□□□□□ -0.2
PNKP-210ENST00000597965 PRDX2P32119 198 aa13.79□□□□□ -0.2
PNKP-210ENST00000597965 BMXP51813 675 aa13.79□□□□□ -0.2
PNKP-210ENST00000597965 GINS1Q14691 196 aa13.79□□□□□ -0.2
PNKP-210ENST00000597965 ZNF829Q3KNS6 432 aaPredicted RBP13.79□□□□□ -0.2
PNKP-210ENST00000597965 MOB3CQ70IA8 216 aa13.79□□□□□ -0.2
PNKP-210ENST00000597965 Q8N2B8 174 aa13.79□□□□□ -0.2
PNKP-210ENST00000597965 OR13D1Q8NGV5 346 aa13.79□□□□□ -0.2
PNKP-210ENST00000597965 RPS4Y2Q8TD47 263 aa13.79□□□□□ -0.2
PNKP-210ENST00000597965 ASB17Q8WXJ9 295 aa13.79□□□□□ -0.2
PNKP-210ENST00000597965 SGCDQ92629 289 aa13.79□□□□□ -0.2
PNKP-210ENST00000597965 MALSU1Q96EH3 234 aa13.79□□□□□ -0.2
PNKP-210ENST00000597965 PRSS22Q9GZN4 317 aa13.79□□□□□ -0.2
PNKP-210ENST00000597965 FGF23Q9GZV9 251 aaPredicted RBP13.79□□□□□ -0.2
PNKP-210ENST00000597965 PIGLQ9Y2B2 252 aa13.79□□□□□ -0.2
PNKP-210ENST00000597965 J3QT63 122 aa13.78□□□□□ -0.2
PNKP-210ENST00000597965 GNGT2O14610 69 aa13.78□□□□□ -0.2
PNKP-210ENST00000597965 NOS1APO75052 506 aaPredicted RBP13.78□□□□□ -0.2
PNKP-210ENST00000597965 DHRS3O75911 302 aa13.78□□□□□ -0.2
PNKP-210ENST00000597965 NXPH2O95156 264 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms