RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 CSNK2A3Q8NEV1 391 aa12.52□□□□□ -0.41
LIG1-214ENST00000597146 BBS1Q8NFJ9 593 aa12.52□□□□□ -0.41
LIG1-214ENST00000597146 FAM81AQ8TBF8 368 aa12.52□□□□□ -0.41
LIG1-214ENST00000597146 CENPNQ96H22 339 aaPredicted RBP12.52□□□□□ -0.41
LIG1-214ENST00000597146 AMELYQ99218 206 aa12.52□□□□□ -0.41
LIG1-214ENST00000597146 MROQ9BYG7 248 aa12.52□□□□□ -0.41
LIG1-214ENST00000597146 WNT10AQ9GZT5 417 aa12.52□□□□□ -0.41
LIG1-214ENST00000597146 RGCCQ9H4X1 137 aa12.52□□□□□ -0.41
LIG1-214ENST00000597146 IKZF2Q9UKS7 526 aa12.52□□□□□ -0.41
LIG1-214ENST00000597146 ANXA2P2A6NMY6 339 aa12.51□□□□□ -0.41
LIG1-214ENST00000597146 PEX14O75381 377 aa12.51□□□□□ -0.41
LIG1-214ENST00000597146 NHLRC4P0CG21 123 aaPredicted RBP12.51□□□□□ -0.41
LIG1-214ENST00000597146 SELLP14151 372 aa12.51□□□□□ -0.41
LIG1-214ENST00000597146 GSK3AP49840 483 aa12.51□□□□□ -0.41
LIG1-214ENST00000597146 NKAPLQ5M9Q1 402 aa12.51□□□□□ -0.41
LIG1-214ENST00000597146 KCTD8Q6ZWB6 473 aa12.51□□□□□ -0.41
LIG1-214ENST00000597146 MEPCEQ7L2J0 689 aaKnown RBP12.51□□□□□ -0.41
LIG1-214ENST00000597146 PLPP7Q8NBV4 271 aa12.51□□□□□ -0.41
LIG1-214ENST00000597146 MUC7Q8TAX7 377 aa12.51□□□□□ -0.41
LIG1-214ENST00000597146 PIFOQ8TCI5 191 aa12.51□□□□□ -0.41
LIG1-214ENST00000597146 ASB17Q8WXJ9 295 aa12.51□□□□□ -0.41
LIG1-214ENST00000597146 H1FXQ92522 213 aaKnown RBP12.51□□□□□ -0.41
LIG1-214ENST00000597146 DUS3LQ96G46 650 aaKnown RBP12.51□□□□□ -0.41
LIG1-214ENST00000597146 IL4I1Q96RQ9 567 aa12.51□□□□□ -0.41
LIG1-214ENST00000597146 MICU1Q9BPX6 476 aa12.51□□□□□ -0.41
LIG1-214ENST00000597146 CDCA4Q9BXL8 241 aa12.51□□□□□ -0.41
LIG1-214ENST00000597146 RIBC2Q9H4K1 309 aa12.51□□□□□ -0.41
LIG1-214ENST00000597146 INPP5EQ9NRR6 644 aa12.51□□□□□ -0.41
LIG1-214ENST00000597146 GTF2A1LQ9UNN4 478 aa12.51□□□□□ -0.41
LIG1-214ENST00000597146 TMEM269A0A1B0GVZ9 245 aa12.5□□□□□ -0.41
LIG1-214ENST00000597146 SAC3D1A6NKF1 404 aa12.5□□□□□ -0.41
LIG1-214ENST00000597146 PSMD9O00233 223 aa12.5□□□□□ -0.41
LIG1-214ENST00000597146 PRKYO43930 277 aa12.5□□□□□ -0.41
LIG1-214ENST00000597146 DUS4LO95620 317 aaKnown RBP12.5□□□□□ -0.41
LIG1-214ENST00000597146 ALOX5APP20292 161 aa12.5□□□□□ -0.41
LIG1-214ENST00000597146 FAM3AP98173 230 aa12.5□□□□□ -0.41
LIG1-214ENST00000597146 NCR3LG1Q68D85 454 aa12.5□□□□□ -0.41
LIG1-214ENST00000597146 Q6ZS46 218 aa12.5□□□□□ -0.41
LIG1-214ENST00000597146 PYDC1Q8WXC3 89 aa12.5□□□□□ -0.41
LIG1-214ENST00000597146 PIGCQ92535 297 aa12.5□□□□□ -0.41
LIG1-214ENST00000597146 SPSB4Q96A44 273 aa12.5□□□□□ -0.41
LIG1-214ENST00000597146 SEH1LQ96EE3 360 aa12.5□□□□□ -0.41
LIG1-214ENST00000597146 CNN2Q99439 309 aaKnown RBP12.5□□□□□ -0.41
LIG1-214ENST00000597146 PAPOLGQ9BWT3 736 aaKnown RBP12.5□□□□□ -0.41
LIG1-214ENST00000597146 ZNF670-ZNF695F2Z2N8 137 aa12.49□□□□□ -0.41
LIG1-214ENST00000597146 ZNF254O75437 659 aa12.49□□□□□ -0.41
LIG1-214ENST00000597146 LHBP01229 141 aa12.49□□□□□ -0.41
LIG1-214ENST00000597146 CHRM2P08172 466 aa12.49□□□□□ -0.41
LIG1-214ENST00000597146 CCDC159P0C7I6 412 aa12.49□□□□□ -0.41
LIG1-214ENST00000597146 FAHP16930 419 aa12.49□□□□□ -0.41
LIG1-214ENST00000597146 RIDAP52758 137 aaKnown RBP12.49□□□□□ -0.41
LIG1-214ENST00000597146 CD83Q01151 205 aa12.49□□□□□ -0.41
LIG1-214ENST00000597146 IL5RAQ01344 420 aa12.49□□□□□ -0.41
LIG1-214ENST00000597146 SLX4IPQ5VYV7 408 aa12.49□□□□□ -0.41
LIG1-214ENST00000597146 KDM4DQ6B0I6 523 aa12.49□□□□□ -0.41
LIG1-214ENST00000597146 DEGS2Q6QHC5 323 aa12.49□□□□□ -0.41
LIG1-214ENST00000597146 LIAT1Q6ZQX7 453 aa12.49□□□□□ -0.41
LIG1-214ENST00000597146 THAP5Q7Z6K1 395 aa12.49□□□□□ -0.41
LIG1-214ENST00000597146 TMEM163Q8TC26 289 aa12.49□□□□□ -0.41
LIG1-214ENST00000597146 DPF1Q92782 380 aa12.49□□□□□ -0.41
LIG1-214ENST00000597146 MEGF9Q9H1U4 602 aa12.49□□□□□ -0.41
LIG1-214ENST00000597146 OAZ3Q9UMX2 235 aa12.49□□□□□ -0.41
LIG1-214ENST00000597146 LRP12Q9Y561 859 aa12.49□□□□□ -0.41
LIG1-214ENST00000597146 ACOD1A6NK06 481 aa12.48□□□□□ -0.41
LIG1-214ENST00000597146 ZAR1LA6NP61 321 aa12.48□□□□□ -0.41
LIG1-214ENST00000597146 NDUFB3O43676 98 aa12.48□□□□□ -0.41
LIG1-214ENST00000597146 ANGPTL7O43827 346 aa12.48□□□□□ -0.41
LIG1-214ENST00000597146 TFF1P04155 84 aa12.48□□□□□ -0.41
LIG1-214ENST00000597146 AMY2BP19961 511 aa12.48□□□□□ -0.41
LIG1-214ENST00000597146 SLC2A5P22732 501 aa12.48□□□□□ -0.41
LIG1-214ENST00000597146 MAP2K3P46734 347 aa12.48□□□□□ -0.41
LIG1-214ENST00000597146 DCTN2Q13561 401 aaKnown RBP12.48□□□□□ -0.41
LIG1-214ENST00000597146 AANATQ16613 207 aa12.48□□□□□ -0.41
LIG1-214ENST00000597146 ZNF829Q3KNS6 432 aaPredicted RBP12.48□□□□□ -0.41
LIG1-214ENST00000597146 PLA1AQ53H76 456 aa12.48□□□□□ -0.41
LIG1-214ENST00000597146 ARSJQ5FYB0 599 aaPredicted RBP12.48□□□□□ -0.41
LIG1-214ENST00000597146 NXNL2Q5VZ03 156 aa12.48□□□□□ -0.41
LIG1-214ENST00000597146 ZFP1Q6P2D0 407 aa12.48□□□□□ -0.41
LIG1-214ENST00000597146 BCDIN3DQ7Z5W3 292 aaKnown RBP12.48□□□□□ -0.41
LIG1-214ENST00000597146 TMEM219Q86XT9 240 aa12.48□□□□□ -0.41
LIG1-214ENST00000597146 GID4Q8IVV7 300 aa12.48□□□□□ -0.41
LIG1-214ENST00000597146 SLC35F2Q8IXU6 374 aa12.48□□□□□ -0.41
LIG1-214ENST00000597146 DTX3Q8N9I9 347 aa12.48□□□□□ -0.41
LIG1-214ENST00000597146 C8orf46Q8TAG6 207 aa12.48□□□□□ -0.41
LIG1-214ENST00000597146 LRRC29Q8WV35 223 aa12.48□□□□□ -0.41
LIG1-214ENST00000597146 RNF170Q96K19 258 aa12.48□□□□□ -0.41
LIG1-214ENST00000597146 RAB3IPQ96QF0 476 aaPredicted RBP12.48□□□□□ -0.41
LIG1-214ENST00000597146 MNTQ99583 582 aa12.48□□□□□ -0.41
LIG1-214ENST00000597146 CIB1Q99828 191 aa12.48□□□□□ -0.41
LIG1-214ENST00000597146 ASCL2Q99929 193 aa12.48□□□□□ -0.41
LIG1-214ENST00000597146 RTL8AQ9BWD3 113 aa12.48□□□□□ -0.41
LIG1-214ENST00000597146 OSBPL10Q9BXB5 764 aa12.48□□□□□ -0.41
LIG1-214ENST00000597146 TTTY10Q9BZA0 68 aa12.48□□□□□ -0.41
LIG1-214ENST00000597146 GABARAPL1Q9H0R8 117 aa12.48□□□□□ -0.41
LIG1-214ENST00000597146 METTL8Q9H825 291 aaKnown RBP12.48□□□□□ -0.41
LIG1-214ENST00000597146 ABCB9Q9NP78 766 aa12.48□□□□□ -0.41
LIG1-214ENST00000597146 IMPAD1Q9NX62 359 aa12.48□□□□□ -0.41
LIG1-214ENST00000597146 ZNF391Q9UJN7 358 aa12.48□□□□□ -0.41
LIG1-214ENST00000597146 KLHDC2Q9Y2U9 406 aa12.48□□□□□ -0.41
LIG1-214ENST00000597146 RHBDD3Q9Y3P4 386 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms