RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 BCDIN3DQ7Z5W3 292 aaKnown RBP13.04□□□□□ -0.32
LIM2-202ENST00000596399 POC1AQ8NBT0 407 aa13.04□□□□□ -0.32
LIM2-202ENST00000596399 OR4C13Q8NGP0 309 aa13.04□□□□□ -0.32
LIM2-202ENST00000596399 OR2T27Q8NH04 317 aa13.04□□□□□ -0.32
LIM2-202ENST00000596399 CFHR4Q92496 578 aa13.04□□□□□ -0.32
LIM2-202ENST00000596399 NKX3-1Q99801 234 aaPredicted RBP13.04□□□□□ -0.32
LIM2-202ENST00000596399 YIPF3Q9GZM5 350 aa13.04□□□□□ -0.32
LIM2-202ENST00000596399 GPR173Q9NS66 373 aa13.04□□□□□ -0.32
LIM2-202ENST00000596399 TVP23BQ9NYZ1 205 aa13.04□□□□□ -0.32
LIM2-202ENST00000596399 M0R129 80 aa13.03□□□□□ -0.32
LIM2-202ENST00000596399 GSC2O15499 205 aa13.03□□□□□ -0.32
LIM2-202ENST00000596399 OPN1MWP04001 364 aa13.03□□□□□ -0.32
LIM2-202ENST00000596399 OPN1MW2P0DN77 364 aa13.03□□□□□ -0.32
LIM2-202ENST00000596399 OPN1MW3P0DN78 364 aa13.03□□□□□ -0.32
LIM2-202ENST00000596399 PIPP12273 146 aaPredicted RBP13.03□□□□□ -0.32
LIM2-202ENST00000596399 HAAOP46952 286 aa13.03□□□□□ -0.32
LIM2-202ENST00000596399 SNAPC1Q16533 368 aa13.03□□□□□ -0.32
LIM2-202ENST00000596399 KCTD18Q6PI47 426 aaPredicted RBP13.03□□□□□ -0.32
LIM2-202ENST00000596399 CCBE1Q6UXH8 406 aaPredicted RBP13.03□□□□□ -0.32
LIM2-202ENST00000596399 OR2T6Q8NHC8 308 aa13.03□□□□□ -0.32
LIM2-202ENST00000596399 MROQ9BYG7 248 aa13.03□□□□□ -0.32
LIM2-202ENST00000596399 FAM234AQ9H0X4 552 aa13.03□□□□□ -0.32
LIM2-202ENST00000596399 RASL12Q9NYN1 266 aa13.03□□□□□ -0.32
LIM2-202ENST00000596399 OR14J1Q9UGF5 321 aa13.03□□□□□ -0.32
LIM2-202ENST00000596399 GTF2A1LQ9UNN4 478 aa13.03□□□□□ -0.32
LIM2-202ENST00000596399 ACOD1A6NK06 481 aa13.02□□□□□ -0.33
LIM2-202ENST00000596399 OR5B21A6NL26 309 aa13.02□□□□□ -0.33
LIM2-202ENST00000596399 E2F6O75461 281 aa13.02□□□□□ -0.33
LIM2-202ENST00000596399 NRASP01111 189 aa13.02□□□□□ -0.33
LIM2-202ENST00000596399 TTRP02766 147 aa13.02□□□□□ -0.33
LIM2-202ENST00000596399 PGA5P0DJD9 388 aa13.02□□□□□ -0.33
LIM2-202ENST00000596399 GK3PQ14409 553 aa13.02□□□□□ -0.33
LIM2-202ENST00000596399 LDLRAD2Q5SZI1 272 aa13.02□□□□□ -0.33
LIM2-202ENST00000596399 SAMD5Q5TGI4 173 aa13.02□□□□□ -0.33
LIM2-202ENST00000596399 ASRGL1Q7L266 308 aa13.02□□□□□ -0.33
LIM2-202ENST00000596399 ZNF679Q8IYX0 411 aa13.02□□□□□ -0.33
LIM2-202ENST00000596399 OR5K1Q8NHB7 308 aa13.02□□□□□ -0.33
LIM2-202ENST00000596399 OR8B4Q96RC9 309 aa13.02□□□□□ -0.33
LIM2-202ENST00000596399 APOL4Q9BPW4 351 aa13.02□□□□□ -0.33
LIM2-202ENST00000596399 THTPAQ9BU02 230 aa13.02□□□□□ -0.33
LIM2-202ENST00000596399 ZNF556Q9HAH1 456 aa13.02□□□□□ -0.33
LIM2-202ENST00000596399 NUFIP1Q9UHK0 495 aaKnown RBP13.02□□□□□ -0.33
LIM2-202ENST00000596399 ENPP5Q9UJA9 477 aa13.02□□□□□ -0.33
LIM2-202ENST00000596399 IKZF2Q9UKS7 526 aa13.02□□□□□ -0.33
LIM2-202ENST00000596399 H3BSH0 61 aa13.01□□□□□ -0.33
LIM2-202ENST00000596399 SLC1A7O00341 560 aa13.01□□□□□ -0.33
LIM2-202ENST00000596399 PRKYO43930 277 aa13.01□□□□□ -0.33
LIM2-202ENST00000596399 SRSF10O75494 262 aaKnown RBP13.01□□□□□ -0.33
LIM2-202ENST00000596399 CD28P10747 220 aa13.01□□□□□ -0.33
LIM2-202ENST00000596399 JUNBP17275 347 aaPredicted RBP13.01□□□□□ -0.33
LIM2-202ENST00000596399 CALB2P22676 271 aa13.01□□□□□ -0.33
LIM2-202ENST00000596399 ESRRGP62508 458 aa13.01□□□□□ -0.33
LIM2-202ENST00000596399 ROM1Q03395 351 aa13.01□□□□□ -0.33
LIM2-202ENST00000596399 FAM189A2Q15884 450 aa13.01□□□□□ -0.33
LIM2-202ENST00000596399 SMIM21Q3B7S5 101 aa13.01□□□□□ -0.33
LIM2-202ENST00000596399 NSUN5P1Q3KNT7 163 aa13.01□□□□□ -0.33
LIM2-202ENST00000596399 ZNF684Q5T5D7 378 aa13.01□□□□□ -0.33
LIM2-202ENST00000596399 DEGS2Q6QHC5 323 aa13.01□□□□□ -0.33
LIM2-202ENST00000596399 Q6ZPA2 131 aa13.01□□□□□ -0.33
LIM2-202ENST00000596399 ANGPTL5Q86XS5 388 aa13.01□□□□□ -0.33
LIM2-202ENST00000596399 TMEM219Q86XT9 240 aa13.01□□□□□ -0.33
LIM2-202ENST00000596399 ZNF561Q8N587 486 aa13.01□□□□□ -0.33
LIM2-202ENST00000596399 NRIP2Q9BQI9 281 aa13.01□□□□□ -0.33
LIM2-202ENST00000596399 C1orf21Q9H246 121 aa13.01□□□□□ -0.33
LIM2-202ENST00000596399 HEXA-AS1Q9H8Q6 139 aa13.01□□□□□ -0.33
LIM2-202ENST00000596399 ZNF702PQ9H963 129 aa13.01□□□□□ -0.33
LIM2-202ENST00000596399 SLC25A19Q9HC21 320 aa13.01□□□□□ -0.33
LIM2-202ENST00000596399 PLXNB1O43157 2135 aa13□□□□□ -0.33
LIM2-202ENST00000596399 A0A1B0GTI1 187 aa13□□□□□ -0.33
LIM2-202ENST00000596399 PQLC2LA1A4F0 135 aa13□□□□□ -0.33
LIM2-202ENST00000596399 F8VVB4 439 aa13□□□□□ -0.33
LIM2-202ENST00000596399 F8VWA3 439 aa13□□□□□ -0.33
LIM2-202ENST00000596399 J3QT63 122 aa13□□□□□ -0.33
LIM2-202ENST00000596399 DHRS3O75911 302 aa13□□□□□ -0.33
LIM2-202ENST00000596399 INMTO95050 263 aa13□□□□□ -0.33
LIM2-202ENST00000596399 NXPH2O95156 264 aa13□□□□□ -0.33
LIM2-202ENST00000596399 TK1P04183 234 aa13□□□□□ -0.33
LIM2-202ENST00000596399 ANXA8P13928 327 aa13□□□□□ -0.33
LIM2-202ENST00000596399 ATP6V1B1P15313 513 aa13□□□□□ -0.33
LIM2-202ENST00000596399 RIDAP52758 137 aaKnown RBP13□□□□□ -0.33
LIM2-202ENST00000596399 DLX6P56179 175 aa13□□□□□ -0.33
LIM2-202ENST00000596399 LGALS4P56470 323 aa13□□□□□ -0.33
LIM2-202ENST00000596399 OXLD1Q5BKU9 147 aa13□□□□□ -0.33
LIM2-202ENST00000596399 KPRPQ5T749 579 aaPredicted RBP13□□□□□ -0.33
LIM2-202ENST00000596399 Q6ZS46 218 aa13□□□□□ -0.33
LIM2-202ENST00000596399 CALHM1Q8IU99 346 aa13□□□□□ -0.33
LIM2-202ENST00000596399 NPFFR1Q9GZQ6 430 aa13□□□□□ -0.33
LIM2-202ENST00000596399 SERTAD4Q9NUC0 356 aa13□□□□□ -0.33
LIM2-202ENST00000596399 USE1Q9NZ43 259 aa13□□□□□ -0.33
LIM2-202ENST00000596399 DNAH3Q8TD57 4116 aa12.99□□□□□ -0.33
LIM2-202ENST00000596399 FAM90A8PA6NJQ4 464 aa12.99□□□□□ -0.33
LIM2-202ENST00000596399 AQP12BA6NM10 295 aa12.99□□□□□ -0.33
LIM2-202ENST00000596399 DAPP51397 102 aa12.99□□□□□ -0.33
LIM2-202ENST00000596399 CRISP1P54107 249 aa12.99□□□□□ -0.33
LIM2-202ENST00000596399 CXCR4P61073 352 aa12.99□□□□□ -0.33
LIM2-202ENST00000596399 CBX1P83916 185 aa12.99□□□□□ -0.33
LIM2-202ENST00000596399 AANATQ16613 207 aa12.99□□□□□ -0.33
LIM2-202ENST00000596399 ODF4Q2M2E3 257 aa12.99□□□□□ -0.33
LIM2-202ENST00000596399 ZNF829Q3KNS6 432 aaPredicted RBP12.99□□□□□ -0.33
LIM2-202ENST00000596399 FBLN7Q53RD9 439 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms