RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 ZNF684Q5T5D7 378 aa18.4■□□□□ 0.54
SSBP4-203ENST00000593641 CRIP3Q6Q6R5 217 aa18.4■□□□□ 0.54
SSBP4-203ENST00000593641 TMEM179BQ7Z7N9 219 aa18.4■□□□□ 0.54
SSBP4-203ENST00000593641 C1orf21Q9H246 121 aa18.4■□□□□ 0.54
SSBP4-203ENST00000593641 DSCAML1Q8TD84 2053 aa18.39■□□□□ 0.53
SSBP4-203ENST00000593641 ZNF254O75437 659 aa18.39■□□□□ 0.53
SSBP4-203ENST00000593641 NRASP01111 189 aa18.39■□□□□ 0.53
SSBP4-203ENST00000593641 MRPL3P09001 348 aaKnown RBP18.39■□□□□ 0.53
SSBP4-203ENST00000593641 CALB2P22676 271 aa18.39■□□□□ 0.53
SSBP4-203ENST00000593641 HAAOP46952 286 aa18.39■□□□□ 0.53
SSBP4-203ENST00000593641 GYS2P54840 703 aa18.39■□□□□ 0.53
SSBP4-203ENST00000593641 ERVFRD-1P60508 538 aa18.39■□□□□ 0.53
SSBP4-203ENST00000593641 LCN1P1Q5VSP4 162 aa18.39■□□□□ 0.53
SSBP4-203ENST00000593641 ADGRG5Q8IZF4 528 aa18.39■□□□□ 0.53
SSBP4-203ENST00000593641 NKX3-1Q99801 234 aaPredicted RBP18.39■□□□□ 0.53
SSBP4-203ENST00000593641 POLDIP2Q9Y2S7 368 aa18.39■□□□□ 0.53
SSBP4-203ENST00000593641 TMEM14AQ9Y6G1 99 aa18.39■□□□□ 0.53
SSBP4-203ENST00000593641 J3QT63 122 aa18.38■□□□□ 0.53
SSBP4-203ENST00000593641 DHRS3O75911 302 aa18.38■□□□□ 0.53
SSBP4-203ENST00000593641 NXPH2O95156 264 aa18.38■□□□□ 0.53
SSBP4-203ENST00000593641 IGLV3-1P01715 115 aa18.38■□□□□ 0.53
SSBP4-203ENST00000593641 PGA5P0DJD9 388 aa18.38■□□□□ 0.53
SSBP4-203ENST00000593641 PRDX2P32119 198 aa18.38■□□□□ 0.53
SSBP4-203ENST00000593641 BMXP51813 675 aa18.38■□□□□ 0.53
SSBP4-203ENST00000593641 RIDAP52758 137 aaKnown RBP18.38■□□□□ 0.53
SSBP4-203ENST00000593641 FBLN7Q53RD9 439 aa18.38■□□□□ 0.53
SSBP4-203ENST00000593641 SAMD5Q5TGI4 173 aa18.38■□□□□ 0.53
SSBP4-203ENST00000593641 TMEM200BQ69YZ2 307 aa18.38■□□□□ 0.53
SSBP4-203ENST00000593641 HIST2H2BDQ6DRA6 164 aa18.38■□□□□ 0.53
SSBP4-203ENST00000593641 ZNF573Q86YE8 665 aa18.38■□□□□ 0.53
SSBP4-203ENST00000593641 ZNF679Q8IYX0 411 aa18.38■□□□□ 0.53
SSBP4-203ENST00000593641 CD177Q8N6Q3 437 aa18.38■□□□□ 0.53
SSBP4-203ENST00000593641 OR4M1Q8NGD0 313 aa18.38■□□□□ 0.53
SSBP4-203ENST00000593641 OR2T27Q8NH04 317 aa18.38■□□□□ 0.53
SSBP4-203ENST00000593641 ASB17Q8WXJ9 295 aa18.38■□□□□ 0.53
SSBP4-203ENST00000593641 ZNF488Q96MN9 340 aa18.38■□□□□ 0.53
SSBP4-203ENST00000593641 OR8B4Q96RC9 309 aa18.38■□□□□ 0.53
SSBP4-203ENST00000593641 TEAD3Q99594 435 aa18.38■□□□□ 0.53
SSBP4-203ENST00000593641 SLC25A19Q9HC21 320 aa18.38■□□□□ 0.53
SSBP4-203ENST00000593641 NUFIP1Q9UHK0 495 aaKnown RBP18.38■□□□□ 0.53
SSBP4-203ENST00000593641 IKZF2Q9UKS7 526 aa18.38■□□□□ 0.53
SSBP4-203ENST00000593641 SYNGR1O43759 233 aa18.37■□□□□ 0.53
SSBP4-203ENST00000593641 CHST1O43916 411 aa18.37■□□□□ 0.53
SSBP4-203ENST00000593641 ANXA8P13928 327 aa18.37■□□□□ 0.53
SSBP4-203ENST00000593641 CCL3L1P16619 93 aa18.37■□□□□ 0.53
SSBP4-203ENST00000593641 HOXB6P17509 224 aaKnown RBP18.37■□□□□ 0.53
SSBP4-203ENST00000593641 CEBPDP49716 269 aaPredicted RBP18.37■□□□□ 0.53
SSBP4-203ENST00000593641 ROM1Q03395 351 aa18.37■□□□□ 0.53
SSBP4-203ENST00000593641 FAM189A2Q15884 450 aa18.37■□□□□ 0.53
SSBP4-203ENST00000593641 SNAPC1Q16533 368 aa18.37■□□□□ 0.53
SSBP4-203ENST00000593641 KPRPQ5T749 579 aaPredicted RBP18.37■□□□□ 0.53
SSBP4-203ENST00000593641 TMEM236Q5W0B7 351 aa18.37■□□□□ 0.53
SSBP4-203ENST00000593641 HS3ST5Q8IZT8 346 aa18.37■□□□□ 0.53
SSBP4-203ENST00000593641 CANT1Q8WVQ1 401 aa18.37■□□□□ 0.53
SSBP4-203ENST00000593641 TTTY10Q9BZA0 68 aa18.37■□□□□ 0.53
SSBP4-203ENST00000593641 TVP23BQ9NYZ1 205 aa18.37■□□□□ 0.53
SSBP4-203ENST00000593641 OR14J1Q9UGF5 321 aa18.37■□□□□ 0.53
SSBP4-203ENST00000593641 GTF2A1LQ9UNN4 478 aa18.37■□□□□ 0.53
SSBP4-203ENST00000593641 AQP12BA6NM10 295 aa18.36■□□□□ 0.53
SSBP4-203ENST00000593641 ESRRGP62508 458 aa18.36■□□□□ 0.53
SSBP4-203ENST00000593641 CLVS2Q5SYC1 327 aa18.36■□□□□ 0.53
SSBP4-203ENST00000593641 ZNF782Q6ZMW2 699 aaPredicted RBP18.36■□□□□ 0.53
SSBP4-203ENST00000593641 REC114Q7Z4M0 266 aa18.36■□□□□ 0.53
SSBP4-203ENST00000593641 AQP12AQ8IXF9 295 aa18.36■□□□□ 0.53
SSBP4-203ENST00000593641 C11orf42Q8N5U0 333 aa18.36■□□□□ 0.53
SSBP4-203ENST00000593641 MOB1AQ9H8S9 216 aa18.36■□□□□ 0.53
SSBP4-203ENST00000593641 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.36■□□□□ 0.53
SSBP4-203ENST00000593641 NOS1APO75052 506 aaPredicted RBP18.35■□□□□ 0.53
SSBP4-203ENST00000593641 FBXO24O75426 580 aa18.35■□□□□ 0.53
SSBP4-203ENST00000593641 PRKACGP22612 351 aa18.35■□□□□ 0.53
SSBP4-203ENST00000593641 ZNF273Q14593 569 aa18.35■□□□□ 0.53
SSBP4-203ENST00000593641 PLA1AQ53H76 456 aa18.35■□□□□ 0.53
SSBP4-203ENST00000593641 CALHM1Q8IU99 346 aa18.35■□□□□ 0.53
SSBP4-203ENST00000593641 OR4S1Q8NGB4 309 aa18.35■□□□□ 0.53
SSBP4-203ENST00000593641 PPP1R14AQ96A00 147 aa18.35■□□□□ 0.53
SSBP4-203ENST00000593641 FOXRED1Q96CU9 486 aaPredicted RBP18.35■□□□□ 0.53
SSBP4-203ENST00000593641 CNN2Q99439 309 aaKnown RBP18.35■□□□□ 0.53
SSBP4-203ENST00000593641 ABCB10Q9NRK6 738 aa18.35■□□□□ 0.53
SSBP4-203ENST00000593641 GPR173Q9NS66 373 aa18.35■□□□□ 0.53
SSBP4-203ENST00000593641 COPS3Q9UNS2 423 aa18.35■□□□□ 0.53
SSBP4-203ENST00000593641 CCDC182A6NF36 153 aa18.34■□□□□ 0.53
SSBP4-203ENST00000593641 VGLL3A8MV65 326 aa18.34■□□□□ 0.53
SSBP4-203ENST00000593641 PRR32B1ATL7 298 aa18.34■□□□□ 0.53
SSBP4-203ENST00000593641 LOC110117498-PIK3R3F6TDL0 507 aa18.34■□□□□ 0.53
SSBP4-203ENST00000593641 PIN1P1O15428 100 aa18.34■□□□□ 0.53
SSBP4-203ENST00000593641 TTRP02766 147 aa18.34■□□□□ 0.53
SSBP4-203ENST00000593641 TK1P04183 234 aa18.34■□□□□ 0.53
SSBP4-203ENST00000593641 PIPP12273 146 aaPredicted RBP18.34■□□□□ 0.53
SSBP4-203ENST00000593641 MFGE8Q08431 387 aaPredicted RBP18.34■□□□□ 0.53
SSBP4-203ENST00000593641 NSUN5P1Q3KNT7 163 aa18.34■□□□□ 0.53
SSBP4-203ENST00000593641 ASRGL1Q7L266 308 aa18.34■□□□□ 0.53
SSBP4-203ENST00000593641 LHFPL4Q7Z7J7 247 aa18.34■□□□□ 0.53
SSBP4-203ENST00000593641 BATF2Q8N1L9 274 aa18.34■□□□□ 0.53
SSBP4-203ENST00000593641 PIFOQ8TCI5 191 aa18.34■□□□□ 0.53
SSBP4-203ENST00000593641 NRIP2Q9BQI9 281 aa18.34■□□□□ 0.53
SSBP4-203ENST00000593641 CDCA4Q9BXL8 241 aa18.34■□□□□ 0.53
SSBP4-203ENST00000593641 TCF19Q9Y242 345 aa18.34■□□□□ 0.53
SSBP4-203ENST00000593641 TBL2Q9Y4P3 447 aaKnown RBP18.34■□□□□ 0.53
SSBP4-203ENST00000593641 DLGAP1O14490 977 aa18.33■□□□□ 0.52
SSBP4-203ENST00000593641 XPNPEP2O43895 674 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms