RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 ENTPD6O75354 484 aa11.41□□□□□ -0.58
APOC1-208ENST00000592535 ALDH3A2P51648 485 aa11.41□□□□□ -0.58
APOC1-208ENST00000592535 DLX1P56177 255 aa11.41□□□□□ -0.58
APOC1-208ENST00000592535 CAV3P56539 151 aa11.41□□□□□ -0.58
APOC1-208ENST00000592535 TP53I3Q53FA7 332 aa11.41□□□□□ -0.58
APOC1-208ENST00000592535 ACP7Q6ZNF0 438 aa11.41□□□□□ -0.58
APOC1-208ENST00000592535 ZNF573Q86YE8 665 aa11.41□□□□□ -0.58
APOC1-208ENST00000592535 CMTM4Q8IZR5 234 aa11.41□□□□□ -0.58
APOC1-208ENST00000592535 CBR4Q8N4T8 237 aa11.41□□□□□ -0.58
APOC1-208ENST00000592535 KIR3DL3Q8N743 410 aa11.41□□□□□ -0.58
APOC1-208ENST00000592535 Q8N7P7 452 aa11.41□□□□□ -0.58
APOC1-208ENST00000592535 ZNRF1Q8ND25 227 aa11.41□□□□□ -0.58
APOC1-208ENST00000592535 TMEM185AQ8NFB2 350 aa11.41□□□□□ -0.58
APOC1-208ENST00000592535 TRUB1Q8WWH5 349 aaKnown RBP11.41□□□□□ -0.58
APOC1-208ENST00000592535 DMRTB1Q96MA1 342 aa11.41□□□□□ -0.58
APOC1-208ENST00000592535 RASL12Q9NYN1 266 aa11.41□□□□□ -0.58
APOC1-208ENST00000592535 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.41□□□□□ -0.58
APOC1-208ENST00000592535 ANKRD61A6NGH8 418 aa11.4□□□□□ -0.58
APOC1-208ENST00000592535 RNASEK-C17orf49H0YIS7 233 aa11.4□□□□□ -0.58
APOC1-208ENST00000592535 SYT7O43581 403 aa11.4□□□□□ -0.58
APOC1-208ENST00000592535 PGA5P0DJD9 388 aa11.4□□□□□ -0.58
APOC1-208ENST00000592535 KIR3DL2P43630 455 aa11.4□□□□□ -0.58
APOC1-208ENST00000592535 ISL1P61371 349 aa11.4□□□□□ -0.58
APOC1-208ENST00000592535 KLRD1Q13241 179 aa11.4□□□□□ -0.58
APOC1-208ENST00000592535 CALHM1Q8IU99 346 aa11.4□□□□□ -0.58
APOC1-208ENST00000592535 BATF2Q8N1L9 274 aa11.4□□□□□ -0.58
APOC1-208ENST00000592535 PRSS35Q8N3Z0 413 aa11.4□□□□□ -0.58
APOC1-208ENST00000592535 PIP4P2Q8N4L2 257 aa11.4□□□□□ -0.58
APOC1-208ENST00000592535 CD177Q8N6Q3 437 aa11.4□□□□□ -0.58
APOC1-208ENST00000592535 TRMT10AQ8TBZ6 339 aaKnown RBP11.4□□□□□ -0.58
APOC1-208ENST00000592535 NPRL2Q8WTW4 380 aa11.4□□□□□ -0.58
APOC1-208ENST00000592535 RNF166Q96A37 237 aaPredicted RBP11.4□□□□□ -0.58
APOC1-208ENST00000592535 RNFT2Q96EX2 444 aa11.4□□□□□ -0.58
APOC1-208ENST00000592535 SDSLQ96GA7 329 aa11.4□□□□□ -0.58
APOC1-208ENST00000592535 MBOAT4Q96T53 435 aa11.4□□□□□ -0.58
APOC1-208ENST00000592535 ZNF747Q9BV97 191 aa11.4□□□□□ -0.58
APOC1-208ENST00000592535 CHIAQ9BZP6 476 aa11.4□□□□□ -0.58
APOC1-208ENST00000592535 PLEKHA1Q9HB21 404 aa11.4□□□□□ -0.58
APOC1-208ENST00000592535 AASSQ9UDR5 926 aa11.4□□□□□ -0.58
APOC1-208ENST00000592535 GNG8Q9UK08 70 aa11.4□□□□□ -0.58
APOC1-208ENST00000592535 FAM230AA0A1W2PPH8 454 aa11.39□□□□□ -0.59
APOC1-208ENST00000592535 A0A1W2PQ09 198 aa11.39□□□□□ -0.59
APOC1-208ENST00000592535 FAM181BA6NEQ2 426 aa11.39□□□□□ -0.59
APOC1-208ENST00000592535 RFPL4AA6NLU0 287 aa11.39□□□□□ -0.59
APOC1-208ENST00000592535 RFPL4AL1F8VTS6 287 aa11.39□□□□□ -0.59
APOC1-208ENST00000592535 NOS1APO75052 506 aaPredicted RBP11.39□□□□□ -0.59
APOC1-208ENST00000592535 OMGP23515 440 aa11.39□□□□□ -0.59
APOC1-208ENST00000592535 MPZP25189 248 aa11.39□□□□□ -0.59
APOC1-208ENST00000592535 CEBPDP49716 269 aaPredicted RBP11.39□□□□□ -0.59
APOC1-208ENST00000592535 SNRPGP62308 76 aaKnown RBP11.39□□□□□ -0.59
APOC1-208ENST00000592535 UBE2V2Q15819 145 aa11.39□□□□□ -0.59
APOC1-208ENST00000592535 OCLNQ16625 522 aa11.39□□□□□ -0.59
APOC1-208ENST00000592535 SMIM21Q3B7S5 101 aa11.39□□□□□ -0.59
APOC1-208ENST00000592535 SLC25A30Q5SVS4 291 aa11.39□□□□□ -0.59
APOC1-208ENST00000592535 METAP1DQ6UB28 335 aaPredicted RBP11.39□□□□□ -0.59
APOC1-208ENST00000592535 FIP1L1Q6UN15 594 aaKnown RBP11.39□□□□□ -0.59
APOC1-208ENST00000592535 FAM220AQ7Z4H9 259 aa11.39□□□□□ -0.59
APOC1-208ENST00000592535 ANGPTL5Q86XS5 388 aa11.39□□□□□ -0.59
APOC1-208ENST00000592535 TNFRSF14Q92956 283 aa11.39□□□□□ -0.59
APOC1-208ENST00000592535 NRIP2Q9BQI9 281 aa11.39□□□□□ -0.59
APOC1-208ENST00000592535 ADI1Q9BV57 179 aa11.39□□□□□ -0.59
APOC1-208ENST00000592535 UNKLQ9H9P5 680 aaKnown RBP11.39□□□□□ -0.59
APOC1-208ENST00000592535 POLDIP2Q9Y2S7 368 aa11.39□□□□□ -0.59
APOC1-208ENST00000592535 IGKV1-27A0A075B6S5 117 aa11.38□□□□□ -0.59
APOC1-208ENST00000592535 LOC107986453A0A1B0GWG9 222 aa11.38□□□□□ -0.59
APOC1-208ENST00000592535 A0A1W2PRD5 423 aa11.38□□□□□ -0.59
APOC1-208ENST00000592535 A0A1W2PRF3 423 aa11.38□□□□□ -0.59
APOC1-208ENST00000592535 A0A1W2PRM7 423 aa11.38□□□□□ -0.59
APOC1-208ENST00000592535 J3QRE1 110 aa11.38□□□□□ -0.59
APOC1-208ENST00000592535 NXPH2O95156 264 aa11.38□□□□□ -0.59
APOC1-208ENST00000592535 IGHV4-59P01825 116 aa11.38□□□□□ -0.59
APOC1-208ENST00000592535 MDKP21741 143 aaPredicted RBP11.38□□□□□ -0.59
APOC1-208ENST00000592535 CAPZA1P52907 286 aa11.38□□□□□ -0.59
APOC1-208ENST00000592535 ACTC1P68032 377 aa11.38□□□□□ -0.59
APOC1-208ENST00000592535 ACTA1P68133 377 aa11.38□□□□□ -0.59
APOC1-208ENST00000592535 MEDAGQ5VYS4 303 aa11.38□□□□□ -0.59
APOC1-208ENST00000592535 LDLRAD3Q86YD5 345 aa11.38□□□□□ -0.59
APOC1-208ENST00000592535 RDH10Q8IZV5 341 aa11.38□□□□□ -0.59
APOC1-208ENST00000592535 FAM185AQ8N0U4 392 aa11.38□□□□□ -0.59
APOC1-208ENST00000592535 TMEM86BQ8N661 226 aa11.38□□□□□ -0.59
APOC1-208ENST00000592535 SSMEM1Q8WWF3 244 aa11.38□□□□□ -0.59
APOC1-208ENST00000592535 SLC29A1Q99808 456 aa11.38□□□□□ -0.59
APOC1-208ENST00000592535 PKIBQ9C010 78 aa11.38□□□□□ -0.59
APOC1-208ENST00000592535 HES4Q9HCC6 221 aa11.38□□□□□ -0.59
APOC1-208ENST00000592535 S100A14Q9HCY8 104 aa11.38□□□□□ -0.59
APOC1-208ENST00000592535 C19orf12Q9NSK7 152 aa11.38□□□□□ -0.59
APOC1-208ENST00000592535 SLC7A11Q9UPY5 501 aa11.38□□□□□ -0.59
APOC1-208ENST00000592535 GMPPBQ9Y5P6 360 aa11.38□□□□□ -0.59
APOC1-208ENST00000592535 POMT1Q9Y6A1 747 aa11.38□□□□□ -0.59
APOC1-208ENST00000592535 TRBV23-1A0A0A0MS06 115 aa11.37□□□□□ -0.59
APOC1-208ENST00000592535 DAPL1A0PJW8 107 aa11.37□□□□□ -0.59
APOC1-208ENST00000592535 M0R1W7 72 aa11.37□□□□□ -0.59
APOC1-208ENST00000592535 NPFFO15130 113 aa11.37□□□□□ -0.59
APOC1-208ENST00000592535 GATBO75879 557 aaKnown RBP11.37□□□□□ -0.59
APOC1-208ENST00000592535 UBCP0CG48 685 aaKnown RBP11.37□□□□□ -0.59
APOC1-208ENST00000592535 GABRB1P18505 474 aa11.37□□□□□ -0.59
APOC1-208ENST00000592535 PRDX2P32119 198 aa11.37□□□□□ -0.59
APOC1-208ENST00000592535 IER3P46695 156 aa11.37□□□□□ -0.59
APOC1-208ENST00000592535 OR12D2P58182 307 aa11.37□□□□□ -0.59
APOC1-208ENST00000592535 ERVK11-1P61568 191 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms