RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 H3BN98 237 aa14.85□□□□□ -0.03
CCDC43-204ENST00000588687 NOS1APO75052 506 aaPredicted RBP14.85□□□□□ -0.03
CCDC43-204ENST00000588687 PRR23D2P0DMB1 279 aaPredicted RBP14.85□□□□□ -0.03
CCDC43-204ENST00000588687 RAB13P51153 203 aa14.85□□□□□ -0.03
CCDC43-204ENST00000588687 CAPZA1P52907 286 aa14.85□□□□□ -0.03
CCDC43-204ENST00000588687 HSP90B2PQ58FF3 399 aa14.85□□□□□ -0.03
CCDC43-204ENST00000588687 TMEM42Q69YG0 159 aa14.85□□□□□ -0.03
CCDC43-204ENST00000588687 ZNF782Q6ZMW2 699 aaPredicted RBP14.85□□□□□ -0.03
CCDC43-204ENST00000588687 Q6ZS46 218 aa14.85□□□□□ -0.03
CCDC43-204ENST00000588687 TMEM179BQ7Z7N9 219 aa14.85□□□□□ -0.03
CCDC43-204ENST00000588687 OR4S1Q8NGB4 309 aa14.85□□□□□ -0.03
CCDC43-204ENST00000588687 OR4M1Q8NGD0 313 aa14.85□□□□□ -0.03
CCDC43-204ENST00000588687 ZNF671Q8TAW3 534 aa14.85□□□□□ -0.03
CCDC43-204ENST00000588687 ITFG2Q969R8 447 aa14.85□□□□□ -0.03
CCDC43-204ENST00000588687 OR8B4Q96RC9 309 aa14.85□□□□□ -0.03
CCDC43-204ENST00000588687 CDCA4Q9BXL8 241 aa14.85□□□□□ -0.03
CCDC43-204ENST00000588687 GPR84Q9NQS5 396 aa14.85□□□□□ -0.03
CCDC43-204ENST00000588687 NDE1Q9NXR1 346 aa14.85□□□□□ -0.03
CCDC43-204ENST00000588687 ACOD1A6NK06 481 aa14.84□□□□□ -0.03
CCDC43-204ENST00000588687 J3QT63 122 aa14.84□□□□□ -0.03
CCDC43-204ENST00000588687 ATP6V1B1P15313 513 aa14.84□□□□□ -0.03
CCDC43-204ENST00000588687 PRDX2P32119 198 aa14.84□□□□□ -0.03
CCDC43-204ENST00000588687 HCCSP53701 268 aa14.84□□□□□ -0.03
CCDC43-204ENST00000588687 MS4A2Q01362 244 aa14.84□□□□□ -0.03
CCDC43-204ENST00000588687 MFGE8Q08431 387 aaPredicted RBP14.84□□□□□ -0.03
CCDC43-204ENST00000588687 GK3PQ14409 553 aa14.84□□□□□ -0.03
CCDC43-204ENST00000588687 GINS1Q14691 196 aa14.84□□□□□ -0.03
CCDC43-204ENST00000588687 PLA1AQ53H76 456 aa14.84□□□□□ -0.03
CCDC43-204ENST00000588687 SLC35D3Q5M8T2 416 aa14.84□□□□□ -0.03
CCDC43-204ENST00000588687 ZBTB37Q5TC79 503 aa14.84□□□□□ -0.03
CCDC43-204ENST00000588687 PLCXD3Q63HM9 321 aa14.84□□□□□ -0.03
CCDC43-204ENST00000588687 ZNF626Q68DY1 528 aa14.84□□□□□ -0.03
CCDC43-204ENST00000588687 TCF23Q7RTU1 214 aa14.84□□□□□ -0.03
CCDC43-204ENST00000588687 TMEM219Q86XT9 240 aa14.84□□□□□ -0.03
CCDC43-204ENST00000588687 CPOQ8IVL8 374 aa14.84□□□□□ -0.03
CCDC43-204ENST00000588687 OR51E1Q8TCB6 317 aa14.84□□□□□ -0.03
CCDC43-204ENST00000588687 R3HDM4Q96D70 268 aa14.84□□□□□ -0.03
CCDC43-204ENST00000588687 TEAD3Q99594 435 aa14.84□□□□□ -0.03
CCDC43-204ENST00000588687 PQLC2LA1A4F0 135 aa14.83□□□□□ -0.04
CCDC43-204ENST00000588687 PSMD9O00233 223 aa14.83□□□□□ -0.04
CCDC43-204ENST00000588687 SLC1A7O00341 560 aa14.83□□□□□ -0.04
CCDC43-204ENST00000588687 SRSF10O75494 262 aaKnown RBP14.83□□□□□ -0.04
CCDC43-204ENST00000588687 TK1P04183 234 aa14.83□□□□□ -0.04
CCDC43-204ENST00000588687 MPZP25189 248 aa14.83□□□□□ -0.04
CCDC43-204ENST00000588687 ERVK11-1P61568 191 aa14.83□□□□□ -0.04
CCDC43-204ENST00000588687 CDK5Q00535 292 aa14.83□□□□□ -0.04
CCDC43-204ENST00000588687 ROM1Q03395 351 aa14.83□□□□□ -0.04
CCDC43-204ENST00000588687 CNN3Q15417 329 aaKnown RBP14.83□□□□□ -0.04
CCDC43-204ENST00000588687 DEGS2Q6QHC5 323 aa14.83□□□□□ -0.04
CCDC43-204ENST00000588687 MOB3CQ70IA8 216 aa14.83□□□□□ -0.04
CCDC43-204ENST00000588687 KRT77Q7Z794 578 aa14.83□□□□□ -0.04
CCDC43-204ENST00000588687 CALHM1Q8IU99 346 aa14.83□□□□□ -0.04
CCDC43-204ENST00000588687 DTX3Q8N9I9 347 aa14.83□□□□□ -0.04
CCDC43-204ENST00000588687 OR4F17Q8NGA8 305 aa14.83□□□□□ -0.04
CCDC43-204ENST00000588687 GIPC3Q8TF64 312 aa14.83□□□□□ -0.04
CCDC43-204ENST00000588687 FOXRED1Q96CU9 486 aaPredicted RBP14.83□□□□□ -0.04
CCDC43-204ENST00000588687 OR4F4Q96R69 305 aa14.83□□□□□ -0.04
CCDC43-204ENST00000588687 PBOV1Q9GZY1 135 aa14.83□□□□□ -0.04
CCDC43-204ENST00000588687 MUC13Q9H3R2 512 aa14.83□□□□□ -0.04
CCDC43-204ENST00000588687 NUFIP1Q9UHK0 495 aaKnown RBP14.83□□□□□ -0.04
CCDC43-204ENST00000588687 LAMP5Q9UJQ1 280 aa14.83□□□□□ -0.04
CCDC43-204ENST00000588687 PIGLQ9Y2B2 252 aa14.83□□□□□ -0.04
CCDC43-204ENST00000588687 TBL2Q9Y4P3 447 aaKnown RBP14.83□□□□□ -0.04
CCDC43-204ENST00000588687 TMEM269A0A1B0GVZ9 245 aa14.82□□□□□ -0.04
CCDC43-204ENST00000588687 A0A1W2PPH5 198 aa14.82□□□□□ -0.04
CCDC43-204ENST00000588687 CCDC182A6NF36 153 aa14.82□□□□□ -0.04
CCDC43-204ENST00000588687 TTRP02766 147 aa14.82□□□□□ -0.04
CCDC43-204ENST00000588687 DYNLT3P51808 116 aa14.82□□□□□ -0.04
CCDC43-204ENST00000588687 EMX1Q04741 257 aaPredicted RBP14.82□□□□□ -0.04
CCDC43-204ENST00000588687 RIPPLY1Q0D2K3 151 aa14.82□□□□□ -0.04
CCDC43-204ENST00000588687 TMEM95Q3KNT9 176 aa14.82□□□□□ -0.04
CCDC43-204ENST00000588687 FOXB2Q5VYV0 432 aa14.82□□□□□ -0.04
CCDC43-204ENST00000588687 OR11H6Q8NGC7 330 aa14.82□□□□□ -0.04
CCDC43-204ENST00000588687 OR2T27Q8NH04 317 aa14.82□□□□□ -0.04
CCDC43-204ENST00000588687 YIPF3Q9GZM5 350 aa14.82□□□□□ -0.04
CCDC43-204ENST00000588687 COPS3Q9UNS2 423 aa14.82□□□□□ -0.04
CCDC43-204ENST00000588687 ZNF737O75373 536 aa14.81□□□□□ -0.04
CCDC43-204ENST00000588687 DHRS3O75911 302 aa14.81□□□□□ -0.04
CCDC43-204ENST00000588687 RBP4P02753 201 aa14.81□□□□□ -0.04
CCDC43-204ENST00000588687 RAP2AP10114 183 aa14.81□□□□□ -0.04
CCDC43-204ENST00000588687 PIPP12273 146 aaPredicted RBP14.81□□□□□ -0.04
CCDC43-204ENST00000588687 JUNBP17275 347 aaPredicted RBP14.81□□□□□ -0.04
CCDC43-204ENST00000588687 HAAOP46952 286 aa14.81□□□□□ -0.04
CCDC43-204ENST00000588687 LGALS4P56470 323 aa14.81□□□□□ -0.04
CCDC43-204ENST00000588687 TRIM25Q14258 630 aaKnown RBP14.81□□□□□ -0.04
CCDC43-204ENST00000588687 FAM98BQ52LJ0 330 aaKnown RBP14.81□□□□□ -0.04
CCDC43-204ENST00000588687 DHFR2Q86XF0 187 aa14.81□□□□□ -0.04
CCDC43-204ENST00000588687 ADGRG5Q8IZF4 528 aa14.81□□□□□ -0.04
CCDC43-204ENST00000588687 BATF2Q8N1L9 274 aa14.81□□□□□ -0.04
CCDC43-204ENST00000588687 WFDC9Q8NEX5 89 aa14.81□□□□□ -0.04
CCDC43-204ENST00000588687 RPS4Y2Q8TD47 263 aa14.81□□□□□ -0.04
CCDC43-204ENST00000588687 SGCDQ92629 289 aa14.81□□□□□ -0.04
CCDC43-204ENST00000588687 ENPP5Q9UJA9 477 aa14.81□□□□□ -0.04
CCDC43-204ENST00000588687 hCG_1809904A0A1W2PP81 198 aa14.8□□□□□ -0.04
CCDC43-204ENST00000588687 A0A1W2PPE2 198 aa14.8□□□□□ -0.04
CCDC43-204ENST00000588687 A0A1W2PR64 198 aa14.8□□□□□ -0.04
CCDC43-204ENST00000588687 A0A1W2PRV1 198 aa14.8□□□□□ -0.04
CCDC43-204ENST00000588687 K7N7A8 449 aa14.8□□□□□ -0.04
CCDC43-204ENST00000588687 NRASP01111 189 aa14.8□□□□□ -0.04
CCDC43-204ENST00000588687 ARG1P05089 322 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms