RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 SMUG1Q53HV7 270 aa5.16□□□□□ -1.58
VMP1-208ENST00000588617 FAM78AQ5JUQ0 283 aa5.16□□□□□ -1.58
VMP1-208ENST00000588617 TIMM23BQ5SRD1 257 aa5.16□□□□□ -1.58
VMP1-208ENST00000588617 ZNF645Q8N7E2 425 aa5.16□□□□□ -1.58
VMP1-208ENST00000588617 DNAAF3Q8N9W5 541 aa5.16□□□□□ -1.58
VMP1-208ENST00000588617 ACTL9Q8TC94 416 aa5.16□□□□□ -1.58
VMP1-208ENST00000588617 WDR34Q96EX3 536 aa5.16□□□□□ -1.58
VMP1-208ENST00000588617 SMIM8Q96KF7 97 aa5.16□□□□□ -1.58
VMP1-208ENST00000588617 FGF23Q9GZV9 251 aaPredicted RBP5.16□□□□□ -1.58
VMP1-208ENST00000588617 C12orf10Q9HB07 376 aa5.16□□□□□ -1.58
VMP1-208ENST00000588617 PDFQ9HBH1 243 aa5.16□□□□□ -1.58
VMP1-208ENST00000588617 WFDC1Q9HC57 220 aa5.16□□□□□ -1.58
VMP1-208ENST00000588617 HMG20AQ9NP66 347 aa5.16□□□□□ -1.58
VMP1-208ENST00000588617 DIABLOQ9NR28 239 aa5.16□□□□□ -1.58
VMP1-208ENST00000588617 TAS2R13Q9NYV9 303 aa5.16□□□□□ -1.58
VMP1-208ENST00000588617 ENPP4Q9Y6X5 453 aa5.16□□□□□ -1.58
VMP1-208ENST00000588617 ADAMTS13Q76LX8 1427 aa5.15□□□□□ -1.58
VMP1-208ENST00000588617 IGHV1OR15-9A0A0B4J2B8 117 aa5.15□□□□□ -1.59
VMP1-208ENST00000588617 A0A1W2PP18 115 aa5.15□□□□□ -1.59
VMP1-208ENST00000588617 RSPH10B2B2RC85 870 aa5.15□□□□□ -1.59
VMP1-208ENST00000588617 C9J4A7 227 aa5.15□□□□□ -1.59
VMP1-208ENST00000588617 GCM2O75603 506 aaPredicted RBP5.15□□□□□ -1.59
VMP1-208ENST00000588617 DHRS3O75911 302 aa5.15□□□□□ -1.59
VMP1-208ENST00000588617 RLN2P04090 185 aa5.15□□□□□ -1.59
VMP1-208ENST00000588617 RSPH10BP0C881 870 aa5.15□□□□□ -1.59
VMP1-208ENST00000588617 ELK1P19419 428 aa5.15□□□□□ -1.59
VMP1-208ENST00000588617 KIR3DL2P43630 455 aa5.15□□□□□ -1.59
VMP1-208ENST00000588617 MPPED2Q15777 294 aa5.15□□□□□ -1.59
VMP1-208ENST00000588617 CYB5R2Q6BCY4 276 aa5.15□□□□□ -1.59
VMP1-208ENST00000588617 NIPAL1Q6NVV3 410 aa5.15□□□□□ -1.59
VMP1-208ENST00000588617 CLEC18BQ6UXF7 455 aa5.15□□□□□ -1.59
VMP1-208ENST00000588617 C10orf107Q8IVU9 208 aa5.15□□□□□ -1.59
VMP1-208ENST00000588617 ARIH2OSQ8N7S6 290 aa5.15□□□□□ -1.59
VMP1-208ENST00000588617 C22orf15Q8WYQ4 148 aa5.15□□□□□ -1.59
VMP1-208ENST00000588617 PPWD1Q96BP3 646 aaKnown RBP5.15□□□□□ -1.59
VMP1-208ENST00000588617 C18orf15Q96N68 181 aa5.15□□□□□ -1.59
VMP1-208ENST00000588617 HBEGFQ99075 208 aa5.15□□□□□ -1.59
VMP1-208ENST00000588617 RSG1Q9BU20 258 aa5.15□□□□□ -1.59
VMP1-208ENST00000588617 EXOSC4Q9NPD3 245 aaKnown RBP5.15□□□□□ -1.59
VMP1-208ENST00000588617 NEU3Q9UQ49 428 aa5.15□□□□□ -1.59
VMP1-208ENST00000588617 C2orf16Q68DN1 1984 aa5.15□□□□□ -1.59
VMP1-208ENST00000588617 NPHP4O75161 1426 aaPredicted RBP5.14□□□□□ -1.59
VMP1-208ENST00000588617 IGKV6D-21A0A0A0MT36 114 aa5.14□□□□□ -1.59
VMP1-208ENST00000588617 PSIP1O75475 530 aaKnown RBP5.14□□□□□ -1.59
VMP1-208ENST00000588617 MPZL1O95297 269 aa5.14□□□□□ -1.59
VMP1-208ENST00000588617 PVALBP20472 110 aaPredicted RBP5.14□□□□□ -1.59
VMP1-208ENST00000588617 TTPAP49638 278 aa5.14□□□□□ -1.59
VMP1-208ENST00000588617 CLEC19AQ6UXS0 136 aa5.14□□□□□ -1.59
VMP1-208ENST00000588617 C15orf56Q8N910 161 aa5.14□□□□□ -1.59
VMP1-208ENST00000588617 ACBD4Q8NC06 268 aa5.14□□□□□ -1.59
VMP1-208ENST00000588617 LFNGQ8NES3 379 aa5.14□□□□□ -1.59
VMP1-208ENST00000588617 OR5W2Q8NH69 310 aa5.14□□□□□ -1.59
VMP1-208ENST00000588617 ENKURQ8TC29 256 aa5.14□□□□□ -1.59
VMP1-208ENST00000588617 MRAP2Q96G30 205 aa5.14□□□□□ -1.59
VMP1-208ENST00000588617 MRPL48Q96GC5 212 aaKnown RBP5.14□□□□□ -1.59
VMP1-208ENST00000588617 QKIQ96PU8 341 aaKnown RBP eCLIP5.14□□□□□ -1.59
VMP1-208ENST00000588617 ZNF382Q96SR6 550 aa5.14□□□□□ -1.59
VMP1-208ENST00000588617 KRTAP2-2Q9BYT5 123 aa5.14□□□□□ -1.59
VMP1-208ENST00000588617 LHX5Q9H2C1 402 aa5.14□□□□□ -1.59
VMP1-208ENST00000588617 PRO0628Q9UI54 55 aa5.14□□□□□ -1.59
VMP1-208ENST00000588617 TOP2AP11388 1531 aaKnown RBP5.13□□□□□ -1.59
VMP1-208ENST00000588617 GPATCH8Q9UKJ3 1502 aaKnown RBP5.13□□□□□ -1.59
VMP1-208ENST00000588617 SMARCA2P51531 1590 aa5.13□□□□□ -1.59
VMP1-208ENST00000588617 IGHV6-1A0A0B4J1U7 121 aa5.13□□□□□ -1.59
VMP1-208ENST00000588617 A0A0U1RQV1 116 aa5.13□□□□□ -1.59
VMP1-208ENST00000588617 RBFOX3A6NFN3 312 aa5.13□□□□□ -1.59
VMP1-208ENST00000588617 CHST10O43529 356 aa5.13□□□□□ -1.59
VMP1-208ENST00000588617 YIF1AO95070 293 aa5.13□□□□□ -1.59
VMP1-208ENST00000588617 ORM1P02763 201 aa5.13□□□□□ -1.59
VMP1-208ENST00000588617 IGKV5-2P06315 115 aa5.13□□□□□ -1.59
VMP1-208ENST00000588617 ZNF35P13682 527 aa5.13□□□□□ -1.59
VMP1-208ENST00000588617 TAC1P20366 129 aa5.13□□□□□ -1.59
VMP1-208ENST00000588617 ADIGQ0VDE8 80 aa5.13□□□□□ -1.59
VMP1-208ENST00000588617 ACTBL2Q562R1 376 aa5.13□□□□□ -1.59
VMP1-208ENST00000588617 ZNF584Q8IVC4 421 aa5.13□□□□□ -1.59
VMP1-208ENST00000588617 C12orf56Q8IXR9 622 aa5.13□□□□□ -1.59
VMP1-208ENST00000588617 OR4M2Q8NGB6 313 aa5.13□□□□□ -1.59
VMP1-208ENST00000588617 OR4K2Q8NGD2 314 aa5.13□□□□□ -1.59
VMP1-208ENST00000588617 FAM45AQ8TCE6 357 aa5.13□□□□□ -1.59
VMP1-208ENST00000588617 PDXPQ96GD0 296 aa5.13□□□□□ -1.59
VMP1-208ENST00000588617 ZNF799Q96GE5 643 aa5.13□□□□□ -1.59
VMP1-208ENST00000588617 C8orf76Q96K31 380 aa5.13□□□□□ -1.59
VMP1-208ENST00000588617 PGLYRP3Q96LB9 341 aa5.13□□□□□ -1.59
VMP1-208ENST00000588617 RPS6KB2Q9UBS0 482 aa5.13□□□□□ -1.59
VMP1-208ENST00000588617 NAGKQ9UJ70 344 aa5.13□□□□□ -1.59
VMP1-208ENST00000588617 FARSAQ9Y285 508 aaKnown RBP5.13□□□□□ -1.59
VMP1-208ENST00000588617 A0A1W2PRG6 482 aa5.12□□□□□ -1.59
VMP1-208ENST00000588617 GOLGA8KD6RF30 607 aa5.12□□□□□ -1.59
VMP1-208ENST00000588617 GOLGA8MH3BSY2 632 aa5.12□□□□□ -1.59
VMP1-208ENST00000588617 EIF1BO60739 113 aaKnown RBP5.12□□□□□ -1.59
VMP1-208ENST00000588617 EIF1P41567 113 aaKnown RBP5.12□□□□□ -1.59
VMP1-208ENST00000588617 GCLMP48507 274 aa5.12□□□□□ -1.59
VMP1-208ENST00000588617 RGS19P49795 217 aa5.12□□□□□ -1.59
VMP1-208ENST00000588617 RAB8AP61006 207 aa5.12□□□□□ -1.59
VMP1-208ENST00000588617 BNIP2Q12982 314 aa5.12□□□□□ -1.59
VMP1-208ENST00000588617 C16orf72Q14CZ0 275 aa5.12□□□□□ -1.59
VMP1-208ENST00000588617 SDHAF4Q5VUM1 108 aa5.12□□□□□ -1.59
VMP1-208ENST00000588617 SLC16A13Q7RTY0 426 aa5.12□□□□□ -1.59
VMP1-208ENST00000588617 CYP4Z2PQ8N1L4 340 aa5.12□□□□□ -1.59
VMP1-208ENST00000588617 RNF175Q8N4F7 328 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms