RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 VHLLQ6RSH7 139 aa22.18■■□□□ 1.14
SCAMP4-210ENST00000588555 FAM89BQ8N5H3 189 aa22.18■■□□□ 1.14
SCAMP4-210ENST00000588555 MICU1Q9BPX6 476 aa22.18■■□□□ 1.14
SCAMP4-210ENST00000588555 THAP7Q9BT49 309 aaPredicted RBP22.18■■□□□ 1.14
SCAMP4-210ENST00000588555 SLC22A4Q9H015 551 aa22.18■■□□□ 1.14
SCAMP4-210ENST00000588555 OR51I2Q9H344 312 aa22.18■■□□□ 1.14
SCAMP4-210ENST00000588555 DUSP13Q9UII6 198 aa22.18■■□□□ 1.14
SCAMP4-210ENST00000588555 TBC1D24Q9ULP9 559 aa22.18■■□□□ 1.14
SCAMP4-210ENST00000588555 KLF3P57682 345 aaPredicted RBP22.17■■□□□ 1.14
SCAMP4-210ENST00000588555 OR8G1Q15617 311 aa22.17■■□□□ 1.14
SCAMP4-210ENST00000588555 SLC22A25Q6T423 547 aa22.17■■□□□ 1.14
SCAMP4-210ENST00000588555 DNM1P46Q6ZS02 220 aa22.17■■□□□ 1.14
SCAMP4-210ENST00000588555 ZNF573Q86YE8 665 aa22.17■■□□□ 1.14
SCAMP4-210ENST00000588555 SAXO1Q8IYX7 474 aa22.17■■□□□ 1.14
SCAMP4-210ENST00000588555 C15orf40Q8WUR7 153 aa22.17■■□□□ 1.14
SCAMP4-210ENST00000588555 NUDT16L1Q9BRJ7 211 aaKnown RBP22.17■■□□□ 1.14
SCAMP4-210ENST00000588555 TM2D1Q9BX74 207 aa22.17■■□□□ 1.14
SCAMP4-210ENST00000588555 AUNIPQ9H7T9 357 aa22.17■■□□□ 1.14
SCAMP4-210ENST00000588555 CA10Q9NS85 328 aa22.17■■□□□ 1.14
SCAMP4-210ENST00000588555 ZNF780AO75290 641 aaPredicted RBP22.17■■□□□ 1.14
SCAMP4-210ENST00000588555 SCGNO76038 276 aa22.17■■□□□ 1.14
SCAMP4-210ENST00000588555 SFTPBP07988 381 aa22.17■■□□□ 1.14
SCAMP4-210ENST00000588555 VEGFCP49767 419 aa22.17■■□□□ 1.14
SCAMP4-210ENST00000588555 SCN1BQ07699 218 aa22.17■■□□□ 1.14
SCAMP4-210ENST00000588555 GPR176Q14439 515 aa22.17■■□□□ 1.14
SCAMP4-210ENST00000588555 RGS21Q2M5E4 152 aa22.17■■□□□ 1.14
SCAMP4-210ENST00000588555 TRIQKQ629K1 86 aa22.17■■□□□ 1.14
SCAMP4-210ENST00000588555 TMEM200AQ86VY9 491 aa22.17■■□□□ 1.14
SCAMP4-210ENST00000588555 ZNF843Q8N446 348 aa22.17■■□□□ 1.14
SCAMP4-210ENST00000588555 ZNF808Q8N4W9 903 aaPredicted RBP22.17■■□□□ 1.14
SCAMP4-210ENST00000588555 OR10AD1Q8NGE0 317 aa22.17■■□□□ 1.14
SCAMP4-210ENST00000588555 ESRP2Q9H6T0 727 aaKnown RBP22.17■■□□□ 1.14
SCAMP4-210ENST00000588555 MSL2Q9HCI7 577 aa22.17■■□□□ 1.14
SCAMP4-210ENST00000588555 MPZP25189 248 aa22.16■■□□□ 1.14
SCAMP4-210ENST00000588555 MRPS10P82664 201 aaKnown RBP22.16■■□□□ 1.14
SCAMP4-210ENST00000588555 Q8NFD4 153 aa22.16■■□□□ 1.14
SCAMP4-210ENST00000588555 Q96M66 194 aa22.16■■□□□ 1.14
SCAMP4-210ENST00000588555 URM1Q9BTM9 101 aaKnown RBP22.16■■□□□ 1.14
SCAMP4-210ENST00000588555 MRPL37Q9BZE1 423 aaKnown RBP22.16■■□□□ 1.14
SCAMP4-210ENST00000588555 SELENOIQ9C0D9 397 aa22.16■■□□□ 1.14
SCAMP4-210ENST00000588555 KMT2BQ9UMN6 2715 aaPredicted RBP22.16■■□□□ 1.14
SCAMP4-210ENST00000588555 SPTBN1Q01082 2364 aaKnown RBP22.16■■□□□ 1.14
SCAMP4-210ENST00000588555 FLNCQ14315 2725 aa22.16■■□□□ 1.14
SCAMP4-210ENST00000588555 ZNF462Q96JM2 2506 aa22.15■■□□□ 1.14
SCAMP4-210ENST00000588555 GABARAPH6UMI1 98 aa22.15■■□□□ 1.14
SCAMP4-210ENST00000588555 C1QL1O75973 258 aa22.15■■□□□ 1.14
SCAMP4-210ENST00000588555 HTR3BO95264 441 aa22.15■■□□□ 1.14
SCAMP4-210ENST00000588555 CLDN14O95500 239 aa22.15■■□□□ 1.14
SCAMP4-210ENST00000588555 CHRM2P08172 466 aa22.15■■□□□ 1.14
SCAMP4-210ENST00000588555 CD3GP09693 182 aa22.15■■□□□ 1.14
SCAMP4-210ENST00000588555 FAM189A2Q15884 450 aa22.15■■□□□ 1.14
SCAMP4-210ENST00000588555 RNASE12Q5GAN4 147 aaKnown RBP22.15■■□□□ 1.14
SCAMP4-210ENST00000588555 HAGHLQ6PII5 290 aaPredicted RBP22.15■■□□□ 1.14
SCAMP4-210ENST00000588555 OR10R2Q8NGX6 335 aa22.15■■□□□ 1.14
SCAMP4-210ENST00000588555 OR13G1Q8NGZ3 307 aa22.15■■□□□ 1.14
SCAMP4-210ENST00000588555 OR52I2Q8NH67 350 aa22.15■■□□□ 1.14
SCAMP4-210ENST00000588555 PLPPR2Q96GM1 343 aa22.15■■□□□ 1.14
SCAMP4-210ENST00000588555 SYT3Q9BQG1 590 aa22.15■■□□□ 1.14
SCAMP4-210ENST00000588555 OCEL1Q9H607 264 aa22.15■■□□□ 1.14
SCAMP4-210ENST00000588555 ZNF442Q9H7R0 627 aa22.15■■□□□ 1.14
SCAMP4-210ENST00000588555 NPDC1Q9NQX5 325 aaPredicted RBP22.15■■□□□ 1.14
SCAMP4-210ENST00000588555 MEIOCA2RUB1 952 aa22.15■■□□□ 1.14
SCAMP4-210ENST00000588555 FOXI3A8MTJ6 420 aaPredicted RBP22.15■■□□□ 1.14
SCAMP4-210ENST00000588555 SYNGR1O43759 233 aa22.15■■□□□ 1.14
SCAMP4-210ENST00000588555 NPBWR2P48146 333 aa22.15■■□□□ 1.14
SCAMP4-210ENST00000588555 ADAM5Q6NVV9 412 aa22.15■■□□□ 1.14
SCAMP4-210ENST00000588555 DMRTC2Q8IXT2 367 aaPredicted RBP22.15■■□□□ 1.14
SCAMP4-210ENST00000588555 MRPL24Q96A35 216 aaKnown RBP22.15■■□□□ 1.14
SCAMP4-210ENST00000588555 PKIBQ9C010 78 aa22.15■■□□□ 1.14
SCAMP4-210ENST00000588555 MTCH1Q9NZJ7 389 aa22.15■■□□□ 1.14
SCAMP4-210ENST00000588555 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP22.14■■□□□ 1.13
SCAMP4-210ENST00000588555 LRP5LA4QPB2 252 aa22.14■■□□□ 1.13
SCAMP4-210ENST00000588555 TUBAL3A6NHL2 446 aa22.14■■□□□ 1.13
SCAMP4-210ENST00000588555 SOCS1O15524 211 aa22.14■■□□□ 1.13
SCAMP4-210ENST00000588555 CSTBP04080 98 aaKnown RBP22.14■■□□□ 1.13
SCAMP4-210ENST00000588555 GTF2F2P13984 249 aa22.14■■□□□ 1.13
SCAMP4-210ENST00000588555 ZNF260Q3ZCT1 412 aa22.14■■□□□ 1.13
SCAMP4-210ENST00000588555 RTN4RL2Q86UN3 420 aa22.14■■□□□ 1.13
SCAMP4-210ENST00000588555 OR51T1Q8NGJ9 327 aa22.14■■□□□ 1.13
SCAMP4-210ENST00000588555 SETD6Q8TBK2 473 aa22.14■■□□□ 1.13
SCAMP4-210ENST00000588555 CHPT1Q8WUD6 406 aa22.14■■□□□ 1.13
SCAMP4-210ENST00000588555 SLAMF9Q96A28 289 aa22.14■■□□□ 1.13
SCAMP4-210ENST00000588555 RBMX2Q9Y388 322 aaKnown RBP22.14■■□□□ 1.13
SCAMP4-210ENST00000588555 TMEM210A6NLX4 147 aa22.13■■□□□ 1.13
SCAMP4-210ENST00000588555 SHISA9B4DS77 424 aa22.13■■□□□ 1.13
SCAMP4-210ENST00000588555 TMEM50BP56557 158 aa22.13■■□□□ 1.13
SCAMP4-210ENST00000588555 IL24Q13007 206 aa22.13■■□□□ 1.13
SCAMP4-210ENST00000588555 ZNF154Q13106 437 aa22.13■■□□□ 1.13
SCAMP4-210ENST00000588555 MKXQ8IYA7 352 aa22.13■■□□□ 1.13
SCAMP4-210ENST00000588555 POC5Q8NA72 575 aa22.13■■□□□ 1.13
SCAMP4-210ENST00000588555 OR56B1Q8NGI3 324 aa22.13■■□□□ 1.13
SCAMP4-210ENST00000588555 AQP3Q92482 292 aa22.13■■□□□ 1.13
SCAMP4-210ENST00000588555 GTF3AQ92664 365 aaKnown RBP22.13■■□□□ 1.13
SCAMP4-210ENST00000588555 MRPS24Q96EL2 167 aaKnown RBP22.13■■□□□ 1.13
SCAMP4-210ENST00000588555 ZMAT3Q9HA38 289 aaKnown RBP22.13■■□□□ 1.13
SCAMP4-210ENST00000588555 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP22.12■■□□□ 1.13
SCAMP4-210ENST00000588555 J3QT63 122 aa22.12■■□□□ 1.13
SCAMP4-210ENST00000588555 PLA2G10O15496 165 aa22.12■■□□□ 1.13
SCAMP4-210ENST00000588555 SIAH2O43255 324 aa22.12■■□□□ 1.13
SCAMP4-210ENST00000588555 CPT2P23786 658 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms