RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 SCGB2B2Q4G0G5 96 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 C4orf46Q504U0 113 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 C9orf135Q5VTT2 229 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 PLCXD3Q63HM9 321 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 LPCAT3Q6P1A2 487 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 ZNF767PQ75MW2 155 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 C1QL2Q7Z5L3 287 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 HOGA1Q86XE5 327 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 C9orf62Q8N4C0 152 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 OR2AK2Q8NG84 335 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 OR13C8Q8NGS7 320 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 OR2T35Q8NGX2 323 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 ST8SIA4Q92187 359 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 PIGCQ92535 297 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 BCL2L2Q92843 193 aaPredicted RBP9.76□□□□□ -0.85
LIG3-204ENST00000585740 POM121L2Q96KW2 1035 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 Q96M66 194 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 OR2A7Q96R45 310 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 PRSS50Q9UI38 385 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 HSF4Q9ULV5 492 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 EDARQ9UNE0 448 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 HSPB11Q9Y547 144 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 KALRNO60229 2985 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 URB1O60287 2271 aaKnown RBP9.76□□□□□ -0.85
LIG3-204ENST00000585740 NAV2Q8IVL1 2488 aa9.76□□□□□ -0.85
LIG3-204ENST00000585740 LOC100509620A0A075B734 347 aa9.75□□□□□ -0.85
LIG3-204ENST00000585740 C5orf49A4QMS7 147 aa9.75□□□□□ -0.85
LIG3-204ENST00000585740 PRSS44E7EML9 344 aa9.75□□□□□ -0.85
LIG3-204ENST00000585740 WT1P19544 449 aaPredicted RBP9.75□□□□□ -0.85
LIG3-204ENST00000585740 AMY2BP19961 511 aa9.75□□□□□ -0.85
LIG3-204ENST00000585740 HRH1P35367 487 aa9.75□□□□□ -0.85
LIG3-204ENST00000585740 PMELP40967 661 aa9.75□□□□□ -0.85
LIG3-204ENST00000585740 ECI1P42126 302 aa9.75□□□□□ -0.85
LIG3-204ENST00000585740 PMP22Q01453 160 aa9.75□□□□□ -0.85
LIG3-204ENST00000585740 DHODHQ02127 395 aa9.75□□□□□ -0.85
LIG3-204ENST00000585740 ATPAF1Q5TC12 328 aaPredicted RBP9.75□□□□□ -0.85
LIG3-204ENST00000585740 LAMTOR1Q6IAA8 161 aa9.75□□□□□ -0.85
LIG3-204ENST00000585740 OR2A2Q6IF42 318 aa9.75□□□□□ -0.85
LIG3-204ENST00000585740 CD163Q86VB7 1156 aa9.75□□□□□ -0.85
LIG3-204ENST00000585740 SLC25A42Q86VD7 318 aa9.75□□□□□ -0.85
LIG3-204ENST00000585740 SAXO1Q8IYX7 474 aa9.75□□□□□ -0.85
LIG3-204ENST00000585740 C12orf45Q8N5I9 185 aaPredicted RBP9.75□□□□□ -0.85
LIG3-204ENST00000585740 GVQW1Q8N7I0 195 aa9.75□□□□□ -0.85
LIG3-204ENST00000585740 OR4S1Q8NGB4 309 aa9.75□□□□□ -0.85
LIG3-204ENST00000585740 OR5H2Q8NGV7 314 aa9.75□□□□□ -0.85
LIG3-204ENST00000585740 OR10K1Q8NGX5 313 aa9.75□□□□□ -0.85
LIG3-204ENST00000585740 MS4A3Q96HJ5 214 aa9.75□□□□□ -0.85
LIG3-204ENST00000585740 GPR137Q96N19 417 aa9.75□□□□□ -0.85
LIG3-204ENST00000585740 TMPRSS13Q9BYE2 586 aa9.75□□□□□ -0.85
LIG3-204ENST00000585740 CHST6Q9GZX3 395 aa9.75□□□□□ -0.85
LIG3-204ENST00000585740 C12orf49Q9H741 205 aa9.75□□□□□ -0.85
LIG3-204ENST00000585740 PLSCR3Q9NRY6 295 aa9.75□□□□□ -0.85
LIG3-204ENST00000585740 DKK4Q9UBT3 224 aa9.75□□□□□ -0.85
LIG3-204ENST00000585740 BOLA1Q9Y3E2 137 aa9.75□□□□□ -0.85
LIG3-204ENST00000585740 KCNMB2Q9Y691 235 aa9.75□□□□□ -0.85
LIG3-204ENST00000585740 TENM4Q6N022 2769 aa9.74□□□□□ -0.85
LIG3-204ENST00000585740 FAM90A10PA6NDY2 464 aa9.74□□□□□ -0.85
LIG3-204ENST00000585740 FAM90A18PA6NE21 464 aa9.74□□□□□ -0.85
LIG3-204ENST00000585740 FAM90A16PA6NEW6 464 aa9.74□□□□□ -0.85
LIG3-204ENST00000585740 FAM90A20PA6NIJ5 464 aa9.74□□□□□ -0.85
LIG3-204ENST00000585740 FAM90A8PA6NJQ4 464 aa9.74□□□□□ -0.85
LIG3-204ENST00000585740 FAM90A7PA6NKC0 464 aa9.74□□□□□ -0.85
LIG3-204ENST00000585740 FAM90A22PA8MWA6 464 aa9.74□□□□□ -0.85
LIG3-204ENST00000585740 FAM90A12PA8MX19 464 aa9.74□□□□□ -0.85
LIG3-204ENST00000585740 FAM90A5PA8MXJ8 464 aa9.74□□□□□ -0.85
LIG3-204ENST00000585740 FAM90A23PA8MXZ1 464 aa9.74□□□□□ -0.85
LIG3-204ENST00000585740 AHRRA9YTQ3 701 aa9.74□□□□□ -0.85
LIG3-204ENST00000585740 F5H5P2 479 aa9.74□□□□□ -0.85
LIG3-204ENST00000585740 TPD52L2O43399 206 aaKnown RBP9.74□□□□□ -0.85
LIG3-204ENST00000585740 RAD51DO75771 328 aa9.74□□□□□ -0.85
LIG3-204ENST00000585740 CSN2P05814 226 aa9.74□□□□□ -0.85
LIG3-204ENST00000585740 FAM90A15PP0C7V4 464 aa9.74□□□□□ -0.85
LIG3-204ENST00000585740 FAM90A13PP0C7W8 464 aa9.74□□□□□ -0.85
LIG3-204ENST00000585740 FAM90A14PP0C7W9 464 aa9.74□□□□□ -0.85
LIG3-204ENST00000585740 FAM90A24PP0C7X0 464 aa9.74□□□□□ -0.85
LIG3-204ENST00000585740 DTYMKP23919 212 aa9.74□□□□□ -0.85
LIG3-204ENST00000585740 OR3A3P47888 321 aa9.74□□□□□ -0.85
LIG3-204ENST00000585740 FOXG1P55316 489 aaPredicted RBP9.74□□□□□ -0.85
LIG3-204ENST00000585740 PDZK1IP1Q13113 114 aa9.74□□□□□ -0.85
LIG3-204ENST00000585740 MRPL49Q13405 166 aaKnown RBP9.74□□□□□ -0.85
LIG3-204ENST00000585740 NKPD1Q17RQ9 610 aa9.74□□□□□ -0.85
LIG3-204ENST00000585740 NSUN5P2Q63ZY6 315 aa9.74□□□□□ -0.85
LIG3-204ENST00000585740 OR52W1Q6IF63 320 aa9.74□□□□□ -0.85
LIG3-204ENST00000585740 IGFL3Q6UXB1 125 aa9.74□□□□□ -0.85
LIG3-204ENST00000585740 TMED4Q7Z7H5 227 aa9.74□□□□□ -0.85
LIG3-204ENST00000585740 ZDHHC23Q8IYP9 409 aa9.74□□□□□ -0.85
LIG3-204ENST00000585740 OSR2Q8N2R0 312 aa9.74□□□□□ -0.85
LIG3-204ENST00000585740 MUC20Q8N307 709 aaPredicted RBP9.74□□□□□ -0.85
LIG3-204ENST00000585740 OR52B4Q8NGK2 314 aa9.74□□□□□ -0.85
LIG3-204ENST00000585740 TERB2Q8NHR7 220 aa9.74□□□□□ -0.85
LIG3-204ENST00000585740 WNT2BQ93097 391 aa9.74□□□□□ -0.85
LIG3-204ENST00000585740 PLEKHJ1Q9NW61 149 aa9.74□□□□□ -0.85
LIG3-204ENST00000585740 PIPOXQ9P0Z9 390 aa9.74□□□□□ -0.85
LIG3-204ENST00000585740 CSAG2Q9Y5P2 127 aa9.74□□□□□ -0.85
LIG3-204ENST00000585740 IGKV1-27A0A075B6S5 117 aa9.73□□□□□ -0.85
LIG3-204ENST00000585740 CEACAM18A8MTB9 384 aa9.73□□□□□ -0.85
LIG3-204ENST00000585740 GOSR2O14653 212 aa9.73□□□□□ -0.85
LIG3-204ENST00000585740 ATXN7O15265 892 aaPredicted RBP9.73□□□□□ -0.85
LIG3-204ENST00000585740 RRP8O43159 456 aaKnown RBP9.73□□□□□ -0.85
LIG3-204ENST00000585740 IL18BPO95998 194 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms