RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 FGF14Q92915 247 aa11.66□□□□□ -0.54
RNF43-208ENST00000584437 FOXB1Q99853 325 aa11.66□□□□□ -0.54
RNF43-208ENST00000584437 MENTQ9BUN1 341 aa11.66□□□□□ -0.54
RNF43-208ENST00000584437 DNAJB12Q9NXW2 375 aaKnown RBP11.66□□□□□ -0.54
RNF43-208ENST00000584437 MYO5AQ9Y4I1 1855 aaKnown RBP11.66□□□□□ -0.54
RNF43-208ENST00000584437 LINC01553A4QN01 128 aa11.66□□□□□ -0.54
RNF43-208ENST00000584437 CDRT15L2A8MXV6 281 aa11.66□□□□□ -0.54
RNF43-208ENST00000584437 SLC25A30Q5SVS4 291 aa11.66□□□□□ -0.54
RNF43-208ENST00000584437 OR2V1Q8NHB1 315 aa11.66□□□□□ -0.54
RNF43-208ENST00000584437 OIT3Q8WWZ8 545 aa11.66□□□□□ -0.54
RNF43-208ENST00000584437 ZNF707Q96C28 371 aaPredicted RBP11.66□□□□□ -0.54
RNF43-208ENST00000584437 SCGB1C2P0DMR2 95 aa11.66□□□□□ -0.54
RNF43-208ENST00000584437 MDH2P40926 338 aaKnown RBP11.66□□□□□ -0.54
RNF43-208ENST00000584437 MRGPREQ86SM8 312 aa11.66□□□□□ -0.54
RNF43-208ENST00000584437 OR2T6Q8NHC8 308 aa11.66□□□□□ -0.54
RNF43-208ENST00000584437 MIXL1Q9H2W2 232 aa11.66□□□□□ -0.54
RNF43-208ENST00000584437 PLAC1Q9HBJ0 212 aa11.66□□□□□ -0.54
RNF43-208ENST00000584437 PPIL1Q9Y3C6 166 aa11.66□□□□□ -0.54
RNF43-208ENST00000584437 TNFSF11O14788 317 aa11.66□□□□□ -0.54
RNF43-208ENST00000584437 HRASP01112 189 aa11.66□□□□□ -0.54
RNF43-208ENST00000584437 GYPAP02724 150 aa11.66□□□□□ -0.54
RNF43-208ENST00000584437 CDAP32320 146 aa11.66□□□□□ -0.54
RNF43-208ENST00000584437 ASCL1P50553 236 aa11.66□□□□□ -0.54
RNF43-208ENST00000584437 DSCR4P56555 118 aaPredicted RBP11.66□□□□□ -0.54
RNF43-208ENST00000584437 PACRGQ96M98 296 aaPredicted RBP11.66□□□□□ -0.54
RNF43-208ENST00000584437 TMEM56Q96MV1 263 aa11.66□□□□□ -0.54
RNF43-208ENST00000584437 RSRP1Q9BUV0 290 aa11.66□□□□□ -0.54
RNF43-208ENST00000584437 TMEM9BQ9NQ34 198 aa11.66□□□□□ -0.54
RNF43-208ENST00000584437 A0A1B0GUL6 1792 aa11.66□□□□□ -0.54
RNF43-208ENST00000584437 ANKRD36CQ5JPF3 1778 aa11.66□□□□□ -0.54
RNF43-208ENST00000584437 LRRC3CA6NJW4 275 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 LINC01387J3KSC0 135 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 GATCO43716 136 aaKnown RBP11.65□□□□□ -0.54
RNF43-208ENST00000584437 PDCD6O75340 191 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 C1QAP02745 245 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 ZGLP1P0C6A0 271 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 CXCL3P19876 107 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 SULT1A2P50226 295 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 CEACAM16Q2WEN9 425 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 CHAC2Q8WUX2 184 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 SARAFQ96BY9 339 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 ACY3Q96HD9 319 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 MIOXQ9UGB7 285 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 SIT1Q9Y3P8 196 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 LGALSLQ3ZCW2 172 aaPredicted RBP11.65□□□□□ -0.54
RNF43-208ENST00000584437 NCMAPQ5T1S8 102 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 NUFIP2Q7Z417 695 aaKnown RBP11.65□□□□□ -0.54
RNF43-208ENST00000584437 CBLN2Q8IUK8 224 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 OR1N1Q8NGS0 311 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 IL22RA2Q969J5 263 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 LRFN3Q9BTN0 628 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 TMEM147Q9BVK8 224 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 PROCRQ9UNN8 238 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 TRGV10A0A0A0MS01 117 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 C7orf77A4D0Y5 90 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 MFNGO00587 321 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 SOX15O60248 233 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 CHRNA7P36544 502 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 PPIAP62937 165 aaKnown RBP11.65□□□□□ -0.54
RNF43-208ENST00000584437 TIAL1Q01085 375 aaKnown RBP eCLIP11.65□□□□□ -0.548e-14■■■■□ 25.7
RNF43-208ENST00000584437 PRDX4Q13162 271 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 C1QTNF12Q5T7M4 302 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 FAM78BQ5VT40 261 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 TRAT1Q6PIZ9 186 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 OR2M7Q8NG81 312 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 OR10G4Q8NGN3 311 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 OR10G9Q8NGN4 311 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 OR10G7Q8NGN6 311 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 SPACA9Q96E40 222 aaPredicted RBP11.65□□□□□ -0.54
RNF43-208ENST00000584437 ZNF764Q96H86 408 aaPredicted RBP11.65□□□□□ -0.54
RNF43-208ENST00000584437 NTMQ9P121 344 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 TCRBV16S1A1N1A0A5B0 115 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 SEMG1P04279 462 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 HEXAP06865 529 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 VEGFBP49765 207 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 PKIAP61925 76 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 VMA21Q3ZAQ7 101 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 STUMQ69YW2 141 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 LIAT1Q6ZQX7 453 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 C17orf78Q8N4C9 275 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 DEFB108BQ8NET1 73 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 CCL4L1Q8NHW4 92 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 AAMDCQ9H7C9 122 aa11.65□□□□□ -0.54
RNF43-208ENST00000584437 LILRA5A6NI73 299 aa11.65□□□□□ -0.55
RNF43-208ENST00000584437 PLA2G10O15496 165 aa11.65□□□□□ -0.55
RNF43-208ENST00000584437 TTRP02766 147 aa11.65□□□□□ -0.55
RNF43-208ENST00000584437 OR5AC1P0C628 307 aa11.65□□□□□ -0.55
RNF43-208ENST00000584437 FAM157BP0CG42 384 aa11.65□□□□□ -0.55
RNF43-208ENST00000584437 CRISP2P16562 243 aa11.65□□□□□ -0.55
RNF43-208ENST00000584437 C8orf82Q6P1X6 216 aaPredicted RBP11.65□□□□□ -0.55
RNF43-208ENST00000584437 OR11H7Q8NGC8 314 aa11.65□□□□□ -0.55
RNF43-208ENST00000584437 OR10A7Q8NGE5 316 aa11.65□□□□□ -0.55
RNF43-208ENST00000584437 ADAT1Q9BUB4 502 aaKnown RBP11.65□□□□□ -0.55
RNF43-208ENST00000584437 ERRFI1Q9UJM3 462 aaPredicted RBP11.65□□□□□ -0.55
RNF43-208ENST00000584437 IGHV3-15A0A0B4J1V0 119 aa11.64□□□□□ -0.55
RNF43-208ENST00000584437 ZNF98A6NK75 572 aa11.64□□□□□ -0.55
RNF43-208ENST00000584437 HLA-GP17693 338 aa11.64□□□□□ -0.55
RNF43-208ENST00000584437 IRF3Q14653 427 aa11.64□□□□□ -0.55
RNF43-208ENST00000584437 ZNF793Q6ZN11 406 aa11.64□□□□□ -0.55
RNF43-208ENST00000584437 Q6ZN92 141 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms