RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 NPRL2Q8WTW4 380 aa11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 GPER1Q99527 375 aa11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 OPN3Q9H1Y3 402 aaPredicted RBP11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 MOB1AQ9H8S9 216 aa11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 MED9Q9NWA0 146 aa11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 A8MXK9 166 aa11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 CREBL2O60519 120 aaPredicted RBP11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 TNFSF13O75888 250 aa11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 LPLP06858 475 aa11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 CST2P09228 141 aa11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 MMP7P09237 267 aaPredicted RBP11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 C4BPBP20851 252 aa11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 ACTBP60709 375 aa11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 ACTG1P63261 375 aa11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 HIST1H3AP68431 136 aa11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 RBMS2Q15434 407 aaKnown RBP11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 GUSBP1Q15486 140 aa11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 SNAI3Q3KNW1 292 aa11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 HIST2H3PS2Q5TEC6 136 aa11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 STEAP1BQ6NZ63 245 aa11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 GFRALQ6UXV0 394 aa11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 HIST2H3AQ71DI3 136 aa11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 ANGPTL5Q86XS5 388 aa11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 ZNF610Q8N9Z0 462 aa11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 SEH1LQ96EE3 360 aa11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 OR2H1Q9GZK4 316 aa11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 KRBOX1C9JBD0 128 aa11□□□□□ -0.65
CDK5RAP3-217ENST00000580287 RPL36A-HNRNPH2H7BZ11 118 aa11□□□□□ -0.65
CDK5RAP3-217ENST00000580287 GOSR2O14653 212 aa11□□□□□ -0.65
CDK5RAP3-217ENST00000580287 NDUFA2O43678 99 aa11□□□□□ -0.65
CDK5RAP3-217ENST00000580287 SYNGR3O43761 229 aa11□□□□□ -0.65
CDK5RAP3-217ENST00000580287 ZNF35P13682 527 aa11□□□□□ -0.65
CDK5RAP3-217ENST00000580287 GABRA1P14867 456 aa11□□□□□ -0.65
CDK5RAP3-217ENST00000580287 IGHV1-2P23083 117 aa11□□□□□ -0.65
CDK5RAP3-217ENST00000580287 HTR5AP47898 357 aa11□□□□□ -0.65
CDK5RAP3-217ENST00000580287 GRB2P62993 217 aaKnown RBP11□□□□□ -0.65
CDK5RAP3-217ENST00000580287 KRTCAP3Q53RY4 240 aa11□□□□□ -0.65
CDK5RAP3-217ENST00000580287 C1orf100Q5SVJ3 147 aa11□□□□□ -0.65
CDK5RAP3-217ENST00000580287 DOLPP1Q86YN1 238 aa11□□□□□ -0.65
CDK5RAP3-217ENST00000580287 COQ8AQ8NI60 647 aa11□□□□□ -0.65
CDK5RAP3-217ENST00000580287 MARC2Q969Z3 335 aa11□□□□□ -0.65
CDK5RAP3-217ENST00000580287 STARD4Q96DR4 205 aa11□□□□□ -0.65
CDK5RAP3-217ENST00000580287 GPN1Q9HCN4 374 aaPredicted RBP11□□□□□ -0.65
CDK5RAP3-217ENST00000580287 TIMM10BQ9Y5J6 103 aa11□□□□□ -0.65
CDK5RAP3-217ENST00000580287 OR6C65A6NJZ3 312 aa11□□□□□ -0.65
CDK5RAP3-217ENST00000580287 M0R135 149 aa11□□□□□ -0.65
CDK5RAP3-217ENST00000580287 FARS2O95363 451 aaKnown RBP11□□□□□ -0.65
CDK5RAP3-217ENST00000580287 RAB3DO95716 219 aa11□□□□□ -0.65
CDK5RAP3-217ENST00000580287 CYB5AP00167 134 aa11□□□□□ -0.65
CDK5RAP3-217ENST00000580287 CTAG1AP78358 180 aa11□□□□□ -0.65
CDK5RAP3-217ENST00000580287 ZNF626Q68DY1 528 aa11□□□□□ -0.65
CDK5RAP3-217ENST00000580287 GABRG1Q8N1C3 465 aa11□□□□□ -0.65
CDK5RAP3-217ENST00000580287 STPG2Q8N412 459 aa11□□□□□ -0.65
CDK5RAP3-217ENST00000580287 LINC00469Q8N7U9 141 aa11□□□□□ -0.65
CDK5RAP3-217ENST00000580287 OR10Z1Q8NGY1 313 aa11□□□□□ -0.65
CDK5RAP3-217ENST00000580287 OR2AE1Q8NHA4 323 aa11□□□□□ -0.65
CDK5RAP3-217ENST00000580287 OR1F12Q8NHA8 337 aa11□□□□□ -0.65
CDK5RAP3-217ENST00000580287 GPX8Q8TED1 209 aa11□□□□□ -0.65
CDK5RAP3-217ENST00000580287 ANAPC16Q96DE5 110 aa11□□□□□ -0.65
CDK5RAP3-217ENST00000580287 ZNF799Q96GE5 643 aa11□□□□□ -0.65
CDK5RAP3-217ENST00000580287 NUDT16L1Q9BRJ7 211 aaKnown RBP11□□□□□ -0.65
CDK5RAP3-217ENST00000580287 ZNF230Q9UIE0 474 aaPredicted RBP11□□□□□ -0.65
CDK5RAP3-217ENST00000580287 ZFYVE26Q68DK2 2539 aa11□□□□□ -0.65
CDK5RAP3-217ENST00000580287 FXYD6-FXYD2A0A087WZ82 144 aa10.99□□□□□ -0.65
CDK5RAP3-217ENST00000580287 LOC390937A0A1W2PQ73 354 aa10.99□□□□□ -0.65
CDK5RAP3-217ENST00000580287 B9A039 149 aa10.99□□□□□ -0.65
CDK5RAP3-217ENST00000580287 AMY2AP04746 511 aa10.99□□□□□ -0.65
CDK5RAP3-217ENST00000580287 ERCC1P07992 297 aaPredicted RBP10.99□□□□□ -0.65
CDK5RAP3-217ENST00000580287 GIPP09681 153 aaPredicted RBP10.99□□□□□ -0.65
CDK5RAP3-217ENST00000580287 MPGP29372 298 aa10.99□□□□□ -0.65
CDK5RAP3-217ENST00000580287 RAB1AP62820 205 aa10.99□□□□□ -0.65
CDK5RAP3-217ENST00000580287 UNC119Q13432 240 aa10.99□□□□□ -0.65
CDK5RAP3-217ENST00000580287 ODF1Q14990 250 aa10.99□□□□□ -0.65
CDK5RAP3-217ENST00000580287 SCGB2B2Q4G0G5 96 aa10.99□□□□□ -0.65
CDK5RAP3-217ENST00000580287 ALKAL2Q6UX46 152 aa10.99□□□□□ -0.65
CDK5RAP3-217ENST00000580287 DNM1P46Q6ZS02 220 aa10.99□□□□□ -0.65
CDK5RAP3-217ENST00000580287 GVQW1Q8N7I0 195 aa10.99□□□□□ -0.65
CDK5RAP3-217ENST00000580287 OR5D18Q8NGL1 313 aa10.99□□□□□ -0.65
CDK5RAP3-217ENST00000580287 FXYD6Q9H0Q3 95 aa10.99□□□□□ -0.65
CDK5RAP3-217ENST00000580287 RAB22AQ9UL26 194 aa10.99□□□□□ -0.65
CDK5RAP3-217ENST00000580287 WIPF3A6NGB9 483 aa10.99□□□□□ -0.65
CDK5RAP3-217ENST00000580287 MCRIP1C9JLW8 97 aa10.99□□□□□ -0.65
CDK5RAP3-217ENST00000580287 VSIG8P0DPA2 414 aa10.99□□□□□ -0.65
CDK5RAP3-217ENST00000580287 NFYAP23511 347 aaPredicted RBP10.99□□□□□ -0.65
CDK5RAP3-217ENST00000580287 TAS2R19P59542 299 aa10.99□□□□□ -0.65
CDK5RAP3-217ENST00000580287 HLXQ14774 488 aaPredicted RBP10.99□□□□□ -0.65
CDK5RAP3-217ENST00000580287 GLIPR1L1Q6UWM5 242 aa10.99□□□□□ -0.65
CDK5RAP3-217ENST00000580287 SPICQ8N5J4 248 aa10.99□□□□□ -0.65
CDK5RAP3-217ENST00000580287 FAM57AQ8TBR7 257 aa10.99□□□□□ -0.65
CDK5RAP3-217ENST00000580287 TNFAIP8L1Q8WVP5 186 aa10.99□□□□□ -0.65
CDK5RAP3-217ENST00000580287 LYZL4Q96KX0 146 aa10.99□□□□□ -0.65
CDK5RAP3-217ENST00000580287 MBD3L4A6NDZ8 208 aaPredicted RBP10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 MBD3L3A6NE82 208 aaPredicted RBP10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 MBD3L5A6NJ08 208 aaPredicted RBP10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 FIGNL2A6NMB9 653 aa10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 LDLRAD4O15165 306 aa10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 MPIG6BO95866 241 aa10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 FGF2P09038 288 aa10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 C1orf185Q5T7R7 199 aa10.98□□□□□ -0.65
CDK5RAP3-217ENST00000580287 OR52W1Q6IF63 320 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms