RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 CNOT1A5YKK6 2376 aaKnown RBP12.16□□□□□ -0.46
VPS33B-208ENST00000574755 DOCK7Q96N67 2140 aa12.16□□□□□ -0.46
VPS33B-208ENST00000574755 ZNF850A8MQ14 1090 aa12.15□□□□□ -0.46
VPS33B-208ENST00000574755 ERVH48-1M5A8F1 160 aa12.15□□□□□ -0.46
VPS33B-208ENST00000574755 SDCBPO00560 298 aaPredicted RBP12.15□□□□□ -0.46
VPS33B-208ENST00000574755 WT1P19544 449 aaPredicted RBP12.15□□□□□ -0.46
VPS33B-208ENST00000574755 NPY4RP50391 375 aa12.15□□□□□ -0.46
VPS33B-208ENST00000574755 PLP2Q04941 152 aa12.15□□□□□ -0.46
VPS33B-208ENST00000574755 OPCMLQ14982 345 aa12.15□□□□□ -0.46
VPS33B-208ENST00000574755 TMEM17Q86X19 198 aa12.15□□□□□ -0.46
VPS33B-208ENST00000574755 OR8H3Q8N146 312 aa12.15□□□□□ -0.46
VPS33B-208ENST00000574755 OR56B2PQ8NGI1 322 aa12.15□□□□□ -0.46
VPS33B-208ENST00000574755 OR5M8Q8NGP6 311 aa12.15□□□□□ -0.46
VPS33B-208ENST00000574755 CASTOR1Q8WTX7 329 aa12.15□□□□□ -0.46
VPS33B-208ENST00000574755 PHB2Q99623 299 aa12.15□□□□□ -0.46
VPS33B-208ENST00000574755 FAM86C1Q9NVL1 165 aa12.15□□□□□ -0.46
VPS33B-208ENST00000574755 EHFQ9NZC4 300 aa12.15□□□□□ -0.46
VPS33B-208ENST00000574755 IGKV1-12A0A0C4DH73 117 aa12.15□□□□□ -0.46
VPS33B-208ENST00000574755 MCRIP1C9JLW8 97 aa12.15□□□□□ -0.46
VPS33B-208ENST00000574755 EFSO43281 561 aa12.15□□□□□ -0.46
VPS33B-208ENST00000574755 CA11O75493 328 aa12.15□□□□□ -0.46
VPS33B-208ENST00000574755 SNAPC5O75971 98 aa12.15□□□□□ -0.46
VPS33B-208ENST00000574755 IFNA7P01567 189 aa12.15□□□□□ -0.46
VPS33B-208ENST00000574755 IL2RAP01589 272 aa12.15□□□□□ -0.46
VPS33B-208ENST00000574755 IGKV1D-12P01611 117 aa12.15□□□□□ -0.46
VPS33B-208ENST00000574755 SORDQ00796 357 aa12.15□□□□□ -0.46
VPS33B-208ENST00000574755 MALLQ13021 153 aa12.15□□□□□ -0.46
VPS33B-208ENST00000574755 PDZK1IP1Q13113 114 aa12.15□□□□□ -0.46
VPS33B-208ENST00000574755 PPA1Q15181 289 aa12.15□□□□□ -0.46
VPS33B-208ENST00000574755 CHRFAM7AQ494W8 412 aa12.15□□□□□ -0.46
VPS33B-208ENST00000574755 ASCL4Q6XD76 172 aa12.15□□□□□ -0.46
VPS33B-208ENST00000574755 MRPL21Q7Z2W9 205 aaKnown RBP12.15□□□□□ -0.46
VPS33B-208ENST00000574755 OR5AP2Q8NGF4 316 aa12.15□□□□□ -0.46
VPS33B-208ENST00000574755 MITD1Q8WV92 249 aa12.15□□□□□ -0.46
VPS33B-208ENST00000574755 APOBEC3DQ96AK3 386 aaPredicted RBP12.15□□□□□ -0.46
VPS33B-208ENST00000574755 PDCD10Q9BUL8 212 aa12.15□□□□□ -0.46
VPS33B-208ENST00000574755 PAPOLGQ9BWT3 736 aaKnown RBP12.15□□□□□ -0.46
VPS33B-208ENST00000574755 HMSDA8MTL9 139 aa12.14□□□□□ -0.47
VPS33B-208ENST00000574755 CCSO14618 274 aa12.14□□□□□ -0.47
VPS33B-208ENST00000574755 TAS2R31P59538 309 aa12.14□□□□□ -0.47
VPS33B-208ENST00000574755 TCF15Q12870 199 aa12.14□□□□□ -0.47
VPS33B-208ENST00000574755 EXOSC2Q13868 293 aaKnown RBP12.14□□□□□ -0.47
VPS33B-208ENST00000574755 HIKESHIQ53FT3 197 aa12.14□□□□□ -0.47
VPS33B-208ENST00000574755 FBXW9Q5XUX1 488 aa12.14□□□□□ -0.47
VPS33B-208ENST00000574755 SIGIRRQ6IA17 410 aa12.14□□□□□ -0.47
VPS33B-208ENST00000574755 LPCAT3Q6P1A2 487 aa12.14□□□□□ -0.47
VPS33B-208ENST00000574755 P4HA3Q7Z4N8 544 aa12.14□□□□□ -0.47
VPS33B-208ENST00000574755 OSR2Q8N2R0 312 aa12.14□□□□□ -0.47
VPS33B-208ENST00000574755 OR51F2Q8NH61 342 aa12.14□□□□□ -0.47
VPS33B-208ENST00000574755 EMG1Q92979 244 aaKnown RBP12.14□□□□□ -0.47
VPS33B-208ENST00000574755 FAAP24Q9BTP7 215 aa12.14□□□□□ -0.47
VPS33B-208ENST00000574755 REPIN1Q9BWE0 567 aaKnown RBP12.14□□□□□ -0.47
VPS33B-208ENST00000574755 GPR160Q9UJ42 338 aa12.14□□□□□ -0.47
VPS33B-208ENST00000574755 ANKRD34BA5PLL1 514 aa12.14□□□□□ -0.47
VPS33B-208ENST00000574755 FIGNL2A6NMB9 653 aa12.14□□□□□ -0.47
VPS33B-208ENST00000574755 PRR33A8MZF0 331 aa12.14□□□□□ -0.47
VPS33B-208ENST00000574755 IL18BPO95998 194 aa12.14□□□□□ -0.47
VPS33B-208ENST00000574755 SFTPBP07988 381 aa12.14□□□□□ -0.47
VPS33B-208ENST00000574755 PPP3CBP16298 524 aa12.14□□□□□ -0.47
VPS33B-208ENST00000574755 MPGP29372 298 aa12.14□□□□□ -0.47
VPS33B-208ENST00000574755 CLN3Q13286 438 aa12.14□□□□□ -0.47
VPS33B-208ENST00000574755 HLXQ14774 488 aaPredicted RBP12.14□□□□□ -0.47
VPS33B-208ENST00000574755 PIGYQ3MUY2 71 aa12.14□□□□□ -0.47
VPS33B-208ENST00000574755 RPUSD3Q6P087 351 aaKnown RBP12.14□□□□□ -0.47
VPS33B-208ENST00000574755 CALHM1Q8IU99 346 aa12.14□□□□□ -0.47
VPS33B-208ENST00000574755 PXT1Q8NFP0 134 aa12.14□□□□□ -0.47
VPS33B-208ENST00000574755 HDHD3Q9BSH5 251 aaPredicted RBP12.14□□□□□ -0.47
VPS33B-208ENST00000574755 PPA2Q9H2U2 334 aa12.14□□□□□ -0.47
VPS33B-208ENST00000574755 ZNF581Q9P0T4 197 aa12.14□□□□□ -0.47
VPS33B-208ENST00000574755 GPR132Q9UNW8 380 aa12.14□□□□□ -0.47
VPS33B-208ENST00000574755 MED12LQ86YW9 2145 aa12.14□□□□□ -0.47
VPS33B-208ENST00000574755 GEMIN2O14893 280 aaKnown RBP12.13□□□□□ -0.47
VPS33B-208ENST00000574755 DUS4LO95620 317 aaKnown RBP12.13□□□□□ -0.47
VPS33B-208ENST00000574755 BAMBIQ13145 260 aa12.13□□□□□ -0.47
VPS33B-208ENST00000574755 TMEM128Q5BJH2 165 aa12.13□□□□□ -0.47
VPS33B-208ENST00000574755 FBXL14Q8N1E6 418 aa12.13□□□□□ -0.47
VPS33B-208ENST00000574755 ZNF611Q8N823 705 aa12.13□□□□□ -0.47
VPS33B-208ENST00000574755 OR1K1Q8NGR3 316 aa12.13□□□□□ -0.47
VPS33B-208ENST00000574755 OR13G1Q8NGZ3 307 aa12.13□□□□□ -0.47
VPS33B-208ENST00000574755 POM121L2Q96KW2 1035 aa12.13□□□□□ -0.47
VPS33B-208ENST00000574755 C5orf66Q9H5L9 145 aa12.13□□□□□ -0.47
VPS33B-208ENST00000574755 HSF4Q9ULV5 492 aa12.13□□□□□ -0.47
VPS33B-208ENST00000574755 ST3GAL6Q9Y274 331 aa12.13□□□□□ -0.47
VPS33B-208ENST00000574755 ZNF175Q9Y473 711 aa12.13□□□□□ -0.47
VPS33B-208ENST00000574755 CEACAM18A8MTB9 384 aa12.13□□□□□ -0.47
VPS33B-208ENST00000574755 NGFP01138 241 aa12.13□□□□□ -0.47
VPS33B-208ENST00000574755 FPR2P25090 351 aa12.13□□□□□ -0.47
VPS33B-208ENST00000574755 S100A11P31949 105 aa12.13□□□□□ -0.47
VPS33B-208ENST00000574755 KCTD9Q7L273 389 aa12.13□□□□□ -0.47
VPS33B-208ENST00000574755 OVCH2Q7RTZ1 564 aa12.13□□□□□ -0.47
VPS33B-208ENST00000574755 LHFPL1Q86WI0 220 aa12.13□□□□□ -0.47
VPS33B-208ENST00000574755 MRPS24Q96EL2 167 aaKnown RBP12.13□□□□□ -0.47
VPS33B-208ENST00000574755 SEC22AQ96IW7 307 aa12.13□□□□□ -0.47
VPS33B-208ENST00000574755 SCGB3A2Q96PL1 93 aa12.13□□□□□ -0.47
VPS33B-208ENST00000574755 GP6Q9HCN6 339 aa12.13□□□□□ -0.47
VPS33B-208ENST00000574755 PCDHB16Q9NRJ7 776 aa12.13□□□□□ -0.47
VPS33B-208ENST00000574755 IL36GQ9NZH8 169 aa12.13□□□□□ -0.47
VPS33B-208ENST00000574755 UBQLN2Q9UHD9 624 aa12.13□□□□□ -0.47
VPS33B-208ENST00000574755 AK3Q9UIJ7 227 aa12.13□□□□□ -0.47
VPS33B-208ENST00000574755 STARD10Q9Y365 291 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms