RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 TOMM40LQ969M1 308 aa12.67□□□□□ -0.38
SMG6-215ENST00000574501 MRPL37Q9BZE1 423 aaKnown RBP12.67□□□□□ -0.38
SMG6-215ENST00000574501 PNO1Q9NRX1 252 aaKnown RBP12.67□□□□□ -0.38
SMG6-215ENST00000574501 TMED7-TICAM2A0A0A6YYA0 188 aa12.66□□□□□ -0.38
SMG6-215ENST00000574501 NSG1A0A0A6YYJ2 146 aa12.66□□□□□ -0.38
SMG6-215ENST00000574501 A0A1B0GW64 132 aa12.66□□□□□ -0.38
SMG6-215ENST00000574501 GEMIN2O14893 280 aaKnown RBP12.66□□□□□ -0.38
SMG6-215ENST00000574501 ADH1BP00325 375 aa12.66□□□□□ -0.38
SMG6-215ENST00000574501 MT-ATP6P00846 226 aa12.66□□□□□ -0.38
SMG6-215ENST00000574501 ACRP10323 421 aa12.66□□□□□ -0.38
SMG6-215ENST00000574501 COX5BP10606 129 aa12.66□□□□□ -0.38
SMG6-215ENST00000574501 GP1BBP13224 206 aa12.66□□□□□ -0.38
SMG6-215ENST00000574501 PAX1P15863 534 aa12.66□□□□□ -0.38
SMG6-215ENST00000574501 APLNRP35414 380 aa12.66□□□□□ -0.38
SMG6-215ENST00000574501 GLIPR1P48060 266 aa12.66□□□□□ -0.38
SMG6-215ENST00000574501 NUTF2P61970 127 aaKnown RBP12.66□□□□□ -0.38
SMG6-215ENST00000574501 C5orf24Q7Z6I8 188 aa12.66□□□□□ -0.38
SMG6-215ENST00000574501 C12orf76Q8N812 135 aaPredicted RBP12.66□□□□□ -0.38
SMG6-215ENST00000574501 OR10S1Q8NGN2 331 aa12.66□□□□□ -0.38
SMG6-215ENST00000574501 TVP23CQ96ET8 276 aa12.66□□□□□ -0.38
SMG6-215ENST00000574501 SHDQ96IW2 340 aa12.66□□□□□ -0.38
SMG6-215ENST00000574501 FAM210BQ96KR6 192 aa12.66□□□□□ -0.38
SMG6-215ENST00000574501 HDHD3Q9BSH5 251 aaPredicted RBP12.66□□□□□ -0.38
SMG6-215ENST00000574501 URM1Q9BTM9 101 aaKnown RBP12.66□□□□□ -0.38
SMG6-215ENST00000574501 FOXD3Q9UJU5 478 aaPredicted RBP12.66□□□□□ -0.38
SMG6-215ENST00000574501 A6NCN8 305 aa12.66□□□□□ -0.38
SMG6-215ENST00000574501 C9J4A7 227 aa12.66□□□□□ -0.38
SMG6-215ENST00000574501 MKRN2OSH3BPM6 223 aa12.66□□□□□ -0.38
SMG6-215ENST00000574501 ADAM10O14672 748 aa12.66□□□□□ -0.38
SMG6-215ENST00000574501 OR5AC1P0C628 307 aa12.66□□□□□ -0.38
SMG6-215ENST00000574501 PIGPP57054 158 aa12.66□□□□□ -0.38
SMG6-215ENST00000574501 LBHQ53QV2 105 aaPredicted RBP12.66□□□□□ -0.38
SMG6-215ENST00000574501 DNLZQ5SXM8 178 aa12.66□□□□□ -0.38
SMG6-215ENST00000574501 P4HA3Q7Z4N8 544 aa12.66□□□□□ -0.38
SMG6-215ENST00000574501 C11orf40Q8WZ69 217 aa12.66□□□□□ -0.38
SMG6-215ENST00000574501 NIPSNAP3BQ9BS92 247 aa12.66□□□□□ -0.38
SMG6-215ENST00000574501 OR8D2Q9GZM6 311 aa12.66□□□□□ -0.38
SMG6-215ENST00000574501 C8orf33Q9H7E9 229 aaPredicted RBP12.66□□□□□ -0.38
SMG6-215ENST00000574501 PADI1Q9ULC6 663 aa12.66□□□□□ -0.38
SMG6-215ENST00000574501 EREGO14944 169 aa12.65□□□□□ -0.38
SMG6-215ENST00000574501 LINC00271P0C7V0 271 aa12.65□□□□□ -0.38
SMG6-215ENST00000574501 GZMBP10144 247 aa12.65□□□□□ -0.38
SMG6-215ENST00000574501 GJA4P35212 333 aa12.65□□□□□ -0.38
SMG6-215ENST00000574501 CD81P60033 236 aa12.65□□□□□ -0.38
SMG6-215ENST00000574501 FOXO1Q12778 655 aa12.65□□□□□ -0.38
SMG6-215ENST00000574501 C21orf62-AS1Q17RA5 79 aa12.65□□□□□ -0.38
SMG6-215ENST00000574501 DEGS2Q6QHC5 323 aa12.65□□□□□ -0.38
SMG6-215ENST00000574501 OR5R1Q8NH85 324 aa12.65□□□□□ -0.38
SMG6-215ENST00000574501 EMC6Q9BV81 110 aa12.65□□□□□ -0.38
SMG6-215ENST00000574501 PECRQ9BY49 303 aa12.65□□□□□ -0.38
SMG6-215ENST00000574501 VN1R1Q9GZP7 353 aa12.65□□□□□ -0.38
SMG6-215ENST00000574501 CPAMD8Q8IZJ3 1885 aa12.65□□□□□ -0.39
SMG6-215ENST00000574501 ZNF705GA8MUZ8 300 aaPredicted RBP12.64□□□□□ -0.39
SMG6-215ENST00000574501 FTCDNL1E5RQL4 147 aa12.64□□□□□ -0.39
SMG6-215ENST00000574501 OMGP23515 440 aa12.64□□□□□ -0.39
SMG6-215ENST00000574501 SLC6A8P48029 635 aa12.64□□□□□ -0.39
SMG6-215ENST00000574501 IGLV3-21P80748 117 aaPredicted RBP12.64□□□□□ -0.39
SMG6-215ENST00000574501 ICAM4Q14773 271 aa12.64□□□□□ -0.39
SMG6-215ENST00000574501 GPR157Q5UAW9 335 aa12.64□□□□□ -0.39
SMG6-215ENST00000574501 C17orf78Q8N4C9 275 aa12.64□□□□□ -0.39
SMG6-215ENST00000574501 ZNF248Q8NDW4 579 aa12.64□□□□□ -0.39
SMG6-215ENST00000574501 OR13D1Q8NGV5 346 aa12.64□□□□□ -0.39
SMG6-215ENST00000574501 C5orf34Q96MH7 638 aa12.64□□□□□ -0.39
SMG6-215ENST00000574501 LIME1Q9H400 295 aa12.64□□□□□ -0.39
SMG6-215ENST00000574501 ZNF319Q9P2F9 582 aa12.64□□□□□ -0.39
SMG6-215ENST00000574501 AK3Q9UIJ7 227 aa12.64□□□□□ -0.39
SMG6-215ENST00000574501 MCTS1Q9ULC4 181 aaKnown RBP12.64□□□□□ -0.39
SMG6-215ENST00000574501 CYP8B1Q9UNU6 501 aa12.64□□□□□ -0.39
SMG6-215ENST00000574501 WSB1Q9Y6I7 421 aa12.64□□□□□ -0.39
SMG6-215ENST00000574501 NPIPA5E9PKD4 350 aa12.64□□□□□ -0.39
SMG6-215ENST00000574501 CTSDP07339 412 aaPredicted RBP12.64□□□□□ -0.39
SMG6-215ENST00000574501 JMJD7P0C870 316 aa12.64□□□□□ -0.39
SMG6-215ENST00000574501 FUT3P21217 361 aa12.64□□□□□ -0.39
SMG6-215ENST00000574501 ATP6V0CP27449 155 aa12.64□□□□□ -0.39
SMG6-215ENST00000574501 SLC37A1P57057 533 aa12.64□□□□□ -0.39
SMG6-215ENST00000574501 NFATC4Q14934 902 aa12.64□□□□□ -0.39
SMG6-215ENST00000574501 TCEAL6Q6IPX3 200 aa12.64□□□□□ -0.39
SMG6-215ENST00000574501 FBXW12Q6X9E4 464 aa12.64□□□□□ -0.39
SMG6-215ENST00000574501 C6orf201Q7Z4U5 140 aa12.64□□□□□ -0.39
SMG6-215ENST00000574501 MMABQ96EY8 250 aaPredicted RBP12.64□□□□□ -0.39
SMG6-215ENST00000574501 SMDT1Q9H4I9 107 aa12.64□□□□□ -0.39
SMG6-215ENST00000574501 GPR84Q9NQS5 396 aa12.64□□□□□ -0.39
SMG6-215ENST00000574501 SIRT7Q9NRC8 400 aa12.64□□□□□ -0.39
SMG6-215ENST00000574501 NPIPA1Q9UND3 350 aa12.64□□□□□ -0.39
SMG6-215ENST00000574501 B3GALT1Q9Y5Z6 326 aa12.64□□□□□ -0.39
SMG6-215ENST00000574501 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.63□□□□□ -0.39
SMG6-215ENST00000574501 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.63□□□□□ -0.39
SMG6-215ENST00000574501 MS4A18H0YCH9 400 aa12.63□□□□□ -0.39
SMG6-215ENST00000574501 PLRG1O43660 514 aaKnown RBP12.63□□□□□ -0.39
SMG6-215ENST00000574501 NPIPB7O75200 414 aa12.63□□□□□ -0.39
SMG6-215ENST00000574501 SCAF4O95104 1147 aaKnown RBP12.63□□□□□ -0.39
SMG6-215ENST00000574501 ZNF17P17021 662 aa12.63□□□□□ -0.39
SMG6-215ENST00000574501 NOVA1P51513 510 aaKnown RBP12.63□□□□□ -0.39
SMG6-215ENST00000574501 POU3F1Q03052 451 aaPredicted RBP12.63□□□□□ -0.39
SMG6-215ENST00000574501 FZD2Q14332 565 aa12.63□□□□□ -0.39
SMG6-215ENST00000574501 MS4A18Q3C1V0 323 aa12.63□□□□□ -0.39
SMG6-215ENST00000574501 OGFOD3Q6PK18 319 aa12.63□□□□□ -0.39
SMG6-215ENST00000574501 SLC22A25Q6T423 547 aa12.63□□□□□ -0.39
SMG6-215ENST00000574501 ASB10Q8WXI3 467 aa12.63□□□□□ -0.39
SMG6-215ENST00000574501 TWSG1Q9GZX9 223 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms