RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 RAMP3O60896 148 aa9.55□□□□□ -0.88
CTNS-208ENST00000574218 DNAJC8O75937 253 aaPredicted RBP9.55□□□□□ -0.88
CTNS-208ENST00000574218 NXPH2O95156 264 aa9.55□□□□□ -0.88
CTNS-208ENST00000574218 RBP4P02753 201 aa9.55□□□□□ -0.88
CTNS-208ENST00000574218 LPLP06858 475 aa9.55□□□□□ -0.88
CTNS-208ENST00000574218 ZNF728P0DKX0 622 aa9.55□□□□□ -0.88
CTNS-208ENST00000574218 SPI1P17947 270 aa9.55□□□□□ -0.88
CTNS-208ENST00000574218 ACKR3P25106 362 aa9.55□□□□□ -0.88
CTNS-208ENST00000574218 MAP2K3P46734 347 aa9.55□□□□□ -0.88
CTNS-208ENST00000574218 CRMP1Q14194 572 aa9.55□□□□□ -0.88
CTNS-208ENST00000574218 CEACAM21Q3KPI0 293 aa9.55□□□□□ -0.88
CTNS-208ENST00000574218 ABCA11PQ4W5N1 156 aa9.55□□□□□ -0.88
CTNS-208ENST00000574218 C9orf152Q5JTZ5 239 aa9.55□□□□□ -0.88
CTNS-208ENST00000574218 SAMD4BQ5PRF9 694 aaKnown RBP9.55□□□□□ -0.88
CTNS-208ENST00000574218 PLCXD3Q63HM9 321 aa9.55□□□□□ -0.88
CTNS-208ENST00000574218 GLYATQ6IB77 296 aa9.55□□□□□ -0.88
CTNS-208ENST00000574218 PRSS45Q7RTY3 260 aa9.55□□□□□ -0.88
CTNS-208ENST00000574218 MRPL41Q8IXM3 137 aaKnown RBP9.55□□□□□ -0.88
CTNS-208ENST00000574218 C11orf42Q8N5U0 333 aa9.55□□□□□ -0.88
CTNS-208ENST00000574218 CD177Q8N6Q3 437 aa9.55□□□□□ -0.88
CTNS-208ENST00000574218 Q8NFD4 153 aa9.55□□□□□ -0.88
CTNS-208ENST00000574218 OR11H6Q8NGC7 330 aa9.55□□□□□ -0.88
CTNS-208ENST00000574218 TFAP2CQ92754 450 aa9.55□□□□□ -0.88
CTNS-208ENST00000574218 C7orf34Q96L11 122 aa9.55□□□□□ -0.88
CTNS-208ENST00000574218 LIN7BQ9HAP6 207 aa9.55□□□□□ -0.88
CTNS-208ENST00000574218 PALMDQ9NP74 551 aa9.55□□□□□ -0.88
CTNS-208ENST00000574218 ZNF319Q9P2F9 582 aa9.55□□□□□ -0.88
CTNS-208ENST00000574218 STAB2Q8WWQ8 2551 aa9.54□□□□□ -0.88
CTNS-208ENST00000574218 RIIAD1A6NNX1 92 aa9.54□□□□□ -0.88
CTNS-208ENST00000574218 GSC2O15499 205 aa9.54□□□□□ -0.88
CTNS-208ENST00000574218 TK1P04183 234 aa9.54□□□□□ -0.88
CTNS-208ENST00000574218 ZNF3P17036 446 aa9.54□□□□□ -0.88
CTNS-208ENST00000574218 RRM2P31350 389 aa9.54□□□□□ -0.88
CTNS-208ENST00000574218 BRS3P32247 399 aa9.54□□□□□ -0.88
CTNS-208ENST00000574218 CEBPDP49716 269 aaPredicted RBP9.54□□□□□ -0.88
CTNS-208ENST00000574218 GP2P55259 537 aaKnown RBP9.54□□□□□ -0.88
CTNS-208ENST00000574218 EDDM3BP56851 147 aa9.54□□□□□ -0.88
CTNS-208ENST00000574218 SF3A3Q12874 501 aaKnown RBP eCLIP9.54□□□□□ -0.88
CTNS-208ENST00000574218 ZBTB49Q6ZSB9 765 aa9.54□□□□□ -0.88
CTNS-208ENST00000574218 MOB3CQ70IA8 216 aa9.54□□□□□ -0.88
CTNS-208ENST00000574218 ASCC1Q8N9N2 400 aaKnown RBP9.54□□□□□ -0.88
CTNS-208ENST00000574218 POC1AQ8NBT0 407 aa9.54□□□□□ -0.88
CTNS-208ENST00000574218 OR5A2Q8NGI9 324 aa9.54□□□□□ -0.88
CTNS-208ENST00000574218 MUC7Q8TAX7 377 aa9.54□□□□□ -0.88
CTNS-208ENST00000574218 AQP3Q92482 292 aa9.54□□□□□ -0.88
CTNS-208ENST00000574218 OTULINQ96BN8 352 aa9.54□□□□□ -0.88
CTNS-208ENST00000574218 SLC25A33Q9BSK2 321 aa9.54□□□□□ -0.88
CTNS-208ENST00000574218 FGF23Q9GZV9 251 aaPredicted RBP9.54□□□□□ -0.88
CTNS-208ENST00000574218 NIPAL2Q9H841 368 aa9.54□□□□□ -0.88
CTNS-208ENST00000574218 DCAF13Q9NV06 445 aaKnown RBP9.54□□□□□ -0.88
CTNS-208ENST00000574218 BAIAP2Q9UQB8 552 aa9.54□□□□□ -0.88
CTNS-208ENST00000574218 POLDIP2Q9Y2S7 368 aa9.54□□□□□ -0.88
CTNS-208ENST00000574218 PSMB11A5LHX3 300 aa9.53□□□□□ -0.88
CTNS-208ENST00000574218 HMGB1P1B2RPK0 211 aaPredicted RBP9.53□□□□□ -0.88
CTNS-208ENST00000574218 H0YHG0 523 aa9.53□□□□□ -0.88
CTNS-208ENST00000574218 LYNP07948 512 aa9.53□□□□□ -0.88
CTNS-208ENST00000574218 IGHV1-8P0DP01 117 aa9.53□□□□□ -0.88
CTNS-208ENST00000574218 CLUP10909 449 aa9.53□□□□□ -0.88
CTNS-208ENST00000574218 H2AFXP16104 143 aaPredicted RBP9.53□□□□□ -0.88
CTNS-208ENST00000574218 GSTT1P30711 240 aa9.53□□□□□ -0.88
CTNS-208ENST00000574218 OPRL1P41146 370 aa9.53□□□□□ -0.88
CTNS-208ENST00000574218 THBS3P49746 956 aa9.53□□□□□ -0.88
CTNS-208ENST00000574218 RAB25P57735 213 aa9.53□□□□□ -0.88
CTNS-208ENST00000574218 ACTA2P62736 377 aa9.53□□□□□ -0.88
CTNS-208ENST00000574218 ACTG2P63267 376 aa9.53□□□□□ -0.88
CTNS-208ENST00000574218 ACTC1P68032 377 aa9.53□□□□□ -0.88
CTNS-208ENST00000574218 ACTA1P68133 377 aa9.53□□□□□ -0.88
CTNS-208ENST00000574218 ZNF684Q5T5D7 378 aa9.53□□□□□ -0.88
CTNS-208ENST00000574218 GDPD3Q7L5L3 318 aa9.53□□□□□ -0.88
CTNS-208ENST00000574218 LINC00471Q8N535 108 aa9.53□□□□□ -0.88
CTNS-208ENST00000574218 ZNF676Q8N7Q3 588 aa9.53□□□□□ -0.88
CTNS-208ENST00000574218 THEM6Q8WUY1 208 aa9.53□□□□□ -0.88
CTNS-208ENST00000574218 ZNF488Q96MN9 340 aa9.53□□□□□ -0.88
CTNS-208ENST00000574218 ZNF714Q96N38 554 aa9.53□□□□□ -0.88
CTNS-208ENST00000574218 ASCL2Q99929 193 aa9.53□□□□□ -0.88
CTNS-208ENST00000574218 TSSK6Q9BXA6 273 aa9.53□□□□□ -0.88
CTNS-208ENST00000574218 EFCAB1Q9HAE3 211 aa9.53□□□□□ -0.88
CTNS-208ENST00000574218 IL1RAPQ9NPH3 570 aa9.53□□□□□ -0.88
CTNS-208ENST00000574218 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.53□□□□□ -0.88
CTNS-208ENST00000574218 FAM90A22PA8MWA6 464 aa9.52□□□□□ -0.89
CTNS-208ENST00000574218 J3QT63 122 aa9.52□□□□□ -0.89
CTNS-208ENST00000574218 FABP3P05413 133 aa9.52□□□□□ -0.89
CTNS-208ENST00000574218 PGA5P0DJD9 388 aa9.52□□□□□ -0.89
CTNS-208ENST00000574218 COX4I1P13073 169 aa9.52□□□□□ -0.89
CTNS-208ENST00000574218 JUNBP17275 347 aaPredicted RBP9.52□□□□□ -0.89
CTNS-208ENST00000574218 HTR1DP28221 377 aa9.52□□□□□ -0.89
CTNS-208ENST00000574218 SLC6A1P30531 599 aa9.52□□□□□ -0.89
CTNS-208ENST00000574218 MYCNOSP40205 109 aa9.52□□□□□ -0.89
CTNS-208ENST00000574218 DLX6P56179 175 aa9.52□□□□□ -0.89
CTNS-208ENST00000574218 PSMA6P60900 246 aaKnown RBP9.52□□□□□ -0.89
CTNS-208ENST00000574218 RIPPLY1Q0D2K3 151 aa9.52□□□□□ -0.89
CTNS-208ENST00000574218 CASC10Q5T4H9 136 aa9.52□□□□□ -0.89
CTNS-208ENST00000574218 ZNF573Q86YE8 665 aa9.52□□□□□ -0.89
CTNS-208ENST00000574218 OSR2Q8N2R0 312 aa9.52□□□□□ -0.89
CTNS-208ENST00000574218 OR2T33Q8NG76 320 aa9.52□□□□□ -0.89
CTNS-208ENST00000574218 OR8B12Q8NGG6 310 aa9.52□□□□□ -0.89
CTNS-208ENST00000574218 BCAS4Q8TDM0 211 aa9.52□□□□□ -0.89
CTNS-208ENST00000574218 ITFG2Q969R8 447 aa9.52□□□□□ -0.89
CTNS-208ENST00000574218 PYURFQ96I23 114 aa9.52□□□□□ -0.89
CTNS-208ENST00000574218 LYZL4Q96KX0 146 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms