RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 OPN1MWP04001 364 aa6.98□□□□□ -1.29
CTDNEP1-203ENST00000570385 OPN1MW2P0DN77 364 aa6.98□□□□□ -1.29
CTDNEP1-203ENST00000570385 OPN1MW3P0DN78 364 aa6.98□□□□□ -1.29
CTDNEP1-203ENST00000570385 OSMP13725 252 aa6.98□□□□□ -1.29
CTDNEP1-203ENST00000570385 JUNBP17275 347 aaPredicted RBP6.98□□□□□ -1.29
CTDNEP1-203ENST00000570385 SLC2A5P22732 501 aa6.98□□□□□ -1.29
CTDNEP1-203ENST00000570385 HAAOP46952 286 aa6.98□□□□□ -1.29
CTDNEP1-203ENST00000570385 LGALS4P56470 323 aa6.98□□□□□ -1.29
CTDNEP1-203ENST00000570385 CDK5Q00535 292 aa6.98□□□□□ -1.29
CTDNEP1-203ENST00000570385 RIPPLY1Q0D2K3 151 aa6.98□□□□□ -1.29
CTDNEP1-203ENST00000570385 ZNF273Q14593 569 aa6.98□□□□□ -1.29
CTDNEP1-203ENST00000570385 SNAPC1Q16533 368 aa6.98□□□□□ -1.29
CTDNEP1-203ENST00000570385 OXLD1Q5BKU9 147 aa6.98□□□□□ -1.29
CTDNEP1-203ENST00000570385 CRIP3Q6Q6R5 217 aa6.98□□□□□ -1.29
CTDNEP1-203ENST00000570385 ASRGL1Q7L266 308 aa6.98□□□□□ -1.29
CTDNEP1-203ENST00000570385 TRPM8Q7Z2W7 1104 aa6.98□□□□□ -1.29
CTDNEP1-203ENST00000570385 BCDIN3DQ7Z5W3 292 aaKnown RBP6.98□□□□□ -1.29
CTDNEP1-203ENST00000570385 TMEM219Q86XT9 240 aa6.98□□□□□ -1.29
CTDNEP1-203ENST00000570385 DYNAPQ8N1N2 210 aa6.98□□□□□ -1.29
CTDNEP1-203ENST00000570385 C11orf42Q8N5U0 333 aa6.98□□□□□ -1.29
CTDNEP1-203ENST00000570385 POC1AQ8NBT0 407 aa6.98□□□□□ -1.29
CTDNEP1-203ENST00000570385 OR5A2Q8NGI9 324 aa6.98□□□□□ -1.29
CTDNEP1-203ENST00000570385 PIFOQ8TCI5 191 aa6.98□□□□□ -1.29
CTDNEP1-203ENST00000570385 SDSLQ96GA7 329 aa6.98□□□□□ -1.29
CTDNEP1-203ENST00000570385 MROQ9BYG7 248 aa6.98□□□□□ -1.29
CTDNEP1-203ENST00000570385 NPFFR1Q9GZQ6 430 aa6.98□□□□□ -1.29
CTDNEP1-203ENST00000570385 MEGF9Q9H1U4 602 aa6.98□□□□□ -1.29
CTDNEP1-203ENST00000570385 C1orf21Q9H246 121 aa6.98□□□□□ -1.29
CTDNEP1-203ENST00000570385 MUC13Q9H3R2 512 aa6.98□□□□□ -1.29
CTDNEP1-203ENST00000570385 HEXA-AS1Q9H8Q6 139 aa6.98□□□□□ -1.29
CTDNEP1-203ENST00000570385 ZNF556Q9HAH1 456 aa6.98□□□□□ -1.29
CTDNEP1-203ENST00000570385 A0A0U1RQV5 110 aa6.97□□□□□ -1.29
CTDNEP1-203ENST00000570385 ARRDC5A6NEK1 342 aa6.97□□□□□ -1.29
CTDNEP1-203ENST00000570385 CCDC182A6NF36 153 aa6.97□□□□□ -1.29
CTDNEP1-203ENST00000570385 M0R129 80 aa6.97□□□□□ -1.29
CTDNEP1-203ENST00000570385 SLC1A7O00341 560 aa6.97□□□□□ -1.29
CTDNEP1-203ENST00000570385 NXPH2O95156 264 aa6.97□□□□□ -1.29
CTDNEP1-203ENST00000570385 NRASP01111 189 aa6.97□□□□□ -1.29
CTDNEP1-203ENST00000570385 TTRP02766 147 aa6.97□□□□□ -1.29
CTDNEP1-203ENST00000570385 T-ENOLP0DO92 83 aa6.97□□□□□ -1.29
CTDNEP1-203ENST00000570385 CD28P10747 220 aa6.97□□□□□ -1.29
CTDNEP1-203ENST00000570385 RIDAP52758 137 aaKnown RBP6.97□□□□□ -1.29
CTDNEP1-203ENST00000570385 SSX2Q16385 188 aa6.97□□□□□ -1.29
CTDNEP1-203ENST00000570385 ODF4Q2M2E3 257 aa6.97□□□□□ -1.29
CTDNEP1-203ENST00000570385 SMIM21Q3B7S5 101 aa6.97□□□□□ -1.29
CTDNEP1-203ENST00000570385 SLC35D3Q5M8T2 416 aa6.97□□□□□ -1.29
CTDNEP1-203ENST00000570385 ZNF684Q5T5D7 378 aa6.97□□□□□ -1.29
CTDNEP1-203ENST00000570385 SAMD5Q5TGI4 173 aa6.97□□□□□ -1.29
CTDNEP1-203ENST00000570385 KCTD18Q6PI47 426 aaPredicted RBP6.97□□□□□ -1.29
CTDNEP1-203ENST00000570385 CCBE1Q6UXH8 406 aaPredicted RBP6.97□□□□□ -1.29
CTDNEP1-203ENST00000570385 Q6ZPA2 131 aa6.97□□□□□ -1.29
CTDNEP1-203ENST00000570385 ANGPTL5Q86XS5 388 aa6.97□□□□□ -1.29
CTDNEP1-203ENST00000570385 ARHGAP24Q8N264 748 aa6.97□□□□□ -1.29
CTDNEP1-203ENST00000570385 ZNF561Q8N587 486 aa6.97□□□□□ -1.29
CTDNEP1-203ENST00000570385 OR5K1Q8NHB7 308 aa6.97□□□□□ -1.29
CTDNEP1-203ENST00000570385 TRMT10AQ8TBZ6 339 aaKnown RBP6.97□□□□□ -1.29
CTDNEP1-203ENST00000570385 CFHR4Q92496 578 aa6.97□□□□□ -1.29
CTDNEP1-203ENST00000570385 ASB9Q96DX5 294 aa6.97□□□□□ -1.29
CTDNEP1-203ENST00000570385 OR8B4Q96RC9 309 aa6.97□□□□□ -1.29
CTDNEP1-203ENST00000570385 APOL4Q9BPW4 351 aa6.97□□□□□ -1.29
CTDNEP1-203ENST00000570385 THTPAQ9BU02 230 aa6.97□□□□□ -1.29
CTDNEP1-203ENST00000570385 YIPF3Q9GZM5 350 aa6.97□□□□□ -1.29
CTDNEP1-203ENST00000570385 ZNF702PQ9H963 129 aa6.97□□□□□ -1.29
CTDNEP1-203ENST00000570385 RASL12Q9NYN1 266 aa6.97□□□□□ -1.29
CTDNEP1-203ENST00000570385 USE1Q9NZ43 259 aa6.97□□□□□ -1.29
CTDNEP1-203ENST00000570385 ENPP5Q9UJA9 477 aa6.97□□□□□ -1.29
CTDNEP1-203ENST00000570385 FAM230AA0A1W2PPH8 454 aa6.96□□□□□ -1.3
CTDNEP1-203ENST00000570385 LOC110117498-PIK3R3F6TDL0 507 aa6.96□□□□□ -1.3
CTDNEP1-203ENST00000570385 J3QT63 122 aa6.96□□□□□ -1.3
CTDNEP1-203ENST00000570385 PRKYO43930 277 aa6.96□□□□□ -1.3
CTDNEP1-203ENST00000570385 FBXO24O75426 580 aa6.96□□□□□ -1.3
CTDNEP1-203ENST00000570385 DHRS3O75911 302 aa6.96□□□□□ -1.3
CTDNEP1-203ENST00000570385 IGLV3-1P01715 115 aa6.96□□□□□ -1.3
CTDNEP1-203ENST00000570385 TK1P04183 234 aa6.96□□□□□ -1.3
CTDNEP1-203ENST00000570385 ARG1P05089 322 aa6.96□□□□□ -1.3
CTDNEP1-203ENST00000570385 PGA5P0DJD9 388 aa6.96□□□□□ -1.3
CTDNEP1-203ENST00000570385 COL10A1Q03692 680 aa6.96□□□□□ -1.3
CTDNEP1-203ENST00000570385 DYNC1I2Q13409 638 aaKnown RBP6.96□□□□□ -1.3
CTDNEP1-203ENST00000570385 ZNF829Q3KNS6 432 aaPredicted RBP6.96□□□□□ -1.3
CTDNEP1-203ENST00000570385 TMEM95Q3KNT9 176 aa6.96□□□□□ -1.3
CTDNEP1-203ENST00000570385 FBLN7Q53RD9 439 aa6.96□□□□□ -1.3
CTDNEP1-203ENST00000570385 KIAA2026Q5HYC2 2103 aa6.96□□□□□ -1.3
CTDNEP1-203ENST00000570385 CLVS2Q5SYC1 327 aa6.96□□□□□ -1.3
CTDNEP1-203ENST00000570385 LDLRAD2Q5SZI1 272 aa6.96□□□□□ -1.3
CTDNEP1-203ENST00000570385 ZNF322Q6U7Q0 402 aaPredicted RBP6.96□□□□□ -1.3
CTDNEP1-203ENST00000570385 Q6ZS46 218 aa6.96□□□□□ -1.3
CTDNEP1-203ENST00000570385 SPATA24Q86W54 205 aa6.96□□□□□ -1.3
CTDNEP1-203ENST00000570385 ZNF573Q86YE8 665 aa6.96□□□□□ -1.3
CTDNEP1-203ENST00000570385 CALHM1Q8IU99 346 aa6.96□□□□□ -1.3
CTDNEP1-203ENST00000570385 ZNF679Q8IYX0 411 aa6.96□□□□□ -1.3
CTDNEP1-203ENST00000570385 ASCC1Q8N9N2 400 aaKnown RBP6.96□□□□□ -1.3
CTDNEP1-203ENST00000570385 R3HDM4Q96D70 268 aa6.96□□□□□ -1.3
CTDNEP1-203ENST00000570385 CITED2Q99967 270 aaPredicted RBP6.96□□□□□ -1.3
CTDNEP1-203ENST00000570385 NRIP2Q9BQI9 281 aa6.96□□□□□ -1.3
CTDNEP1-203ENST00000570385 MMP28Q9H239 520 aa6.96□□□□□ -1.3
CTDNEP1-203ENST00000570385 RANBP3Q9H6Z4 567 aaPredicted RBP6.96□□□□□ -1.3
CTDNEP1-203ENST00000570385 RAB18Q9NP72 206 aa6.96□□□□□ -1.3
CTDNEP1-203ENST00000570385 SERTAD4Q9NUC0 356 aa6.96□□□□□ -1.3
CTDNEP1-203ENST00000570385 NUFIP1Q9UHK0 495 aaKnown RBP6.96□□□□□ -1.3
CTDNEP1-203ENST00000570385 SLC22A13Q9Y226 551 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms