RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 ANKRD61A6NGH8 418 aa16.72■□□□□ 0.27
CLK3-225ENST00000569063 SYNGR1O43759 233 aa16.72■□□□□ 0.27
CLK3-225ENST00000569063 IGHV1-69P01742 117 aa16.72■□□□□ 0.27
CLK3-225ENST00000569063 PGA5P0DJD9 388 aa16.72■□□□□ 0.27
CLK3-225ENST00000569063 HKR1P10072 659 aa16.72■□□□□ 0.27
CLK3-225ENST00000569063 GABRA2P47869 451 aa16.72■□□□□ 0.27
CLK3-225ENST00000569063 RUSC1-AS1Q66K80 236 aa16.72■□□□□ 0.27
CLK3-225ENST00000569063 ACP7Q6ZNF0 438 aa16.72■□□□□ 0.27
CLK3-225ENST00000569063 ZBTB49Q6ZSB9 765 aa16.72■□□□□ 0.27
CLK3-225ENST00000569063 LHX4Q969G2 390 aa16.72■□□□□ 0.27
CLK3-225ENST00000569063 SDSLQ96GA7 329 aa16.72■□□□□ 0.27
CLK3-225ENST00000569063 ADI1Q9BV57 179 aa16.72■□□□□ 0.27
CLK3-225ENST00000569063 PLEKHA1Q9HB21 404 aa16.72■□□□□ 0.27
CLK3-225ENST00000569063 NOX4Q9NPH5 578 aa16.72■□□□□ 0.27
CLK3-225ENST00000569063 EXOGQ9Y2C4 368 aaKnown RBP16.72■□□□□ 0.27
CLK3-225ENST00000569063 MAB21L2Q9Y586 359 aa16.72■□□□□ 0.27
CLK3-225ENST00000569063 PCDHGB1Q9Y5G3 927 aa16.72■□□□□ 0.27
CLK3-225ENST00000569063 DAPL1A0PJW8 107 aa16.71■□□□□ 0.27
CLK3-225ENST00000569063 MPZL2O60487 215 aa16.71■□□□□ 0.27
CLK3-225ENST00000569063 UBCP0CG48 685 aaKnown RBP16.71■□□□□ 0.27
CLK3-225ENST00000569063 MPZP25189 248 aa16.71■□□□□ 0.27
CLK3-225ENST00000569063 FDX2Q6P4F2 183 aa16.71■□□□□ 0.27
CLK3-225ENST00000569063 METAP1DQ6UB28 335 aaPredicted RBP16.71■□□□□ 0.27
CLK3-225ENST00000569063 Q6YL49 198 aa16.71■□□□□ 0.27
CLK3-225ENST00000569063 VMO1Q7Z5L0 202 aa16.71■□□□□ 0.27
CLK3-225ENST00000569063 ENTHD1Q8IYW4 607 aa16.71■□□□□ 0.27
CLK3-225ENST00000569063 CMTM4Q8IZR5 234 aa16.71■□□□□ 0.27
CLK3-225ENST00000569063 ACBD7Q8N6N7 88 aa16.71■□□□□ 0.27
CLK3-225ENST00000569063 ZNRF1Q8ND25 227 aa16.71■□□□□ 0.27
CLK3-225ENST00000569063 H1FXQ92522 213 aaKnown RBP16.71■□□□□ 0.27
CLK3-225ENST00000569063 C10orf35Q96D05 121 aa16.71■□□□□ 0.27
CLK3-225ENST00000569063 NRIP2Q9BQI9 281 aa16.71■□□□□ 0.27
CLK3-225ENST00000569063 ONECUT1Q9UBC0 465 aa16.71■□□□□ 0.27
CLK3-225ENST00000569063 SLC16A6O15403 523 aa16.7■□□□□ 0.26
CLK3-225ENST00000569063 KIR3DL2P43630 455 aa16.7■□□□□ 0.26
CLK3-225ENST00000569063 UBE2V2Q15819 145 aa16.7■□□□□ 0.26
CLK3-225ENST00000569063 SMIM21Q3B7S5 101 aa16.7■□□□□ 0.26
CLK3-225ENST00000569063 AWAT1Q58HT5 328 aa16.7■□□□□ 0.26
CLK3-225ENST00000569063 C1orf122Q6ZSJ8 110 aa16.7■□□□□ 0.26
CLK3-225ENST00000569063 C3orf56Q8N813 242 aa16.7■□□□□ 0.26
CLK3-225ENST00000569063 OR2G2Q8NGZ5 317 aa16.7■□□□□ 0.26
CLK3-225ENST00000569063 RHOXF1Q8NHV9 184 aa16.7■□□□□ 0.26
CLK3-225ENST00000569063 ZDHHC16Q969W1 377 aa16.7■□□□□ 0.26
CLK3-225ENST00000569063 ZNF488Q96MN9 340 aa16.7■□□□□ 0.26
CLK3-225ENST00000569063 PKIBQ9C010 78 aa16.7■□□□□ 0.26
CLK3-225ENST00000569063 CHST5Q9GZS9 411 aa16.7■□□□□ 0.26
CLK3-225ENST00000569063 HES4Q9HCC6 221 aa16.7■□□□□ 0.26
CLK3-225ENST00000569063 FRRS1LQ9P0K9 344 aa16.7■□□□□ 0.26
CLK3-225ENST00000569063 AASSQ9UDR5 926 aa16.7■□□□□ 0.26
CLK3-225ENST00000569063 SLC7A11Q9UPY5 501 aa16.7■□□□□ 0.26
CLK3-225ENST00000569063 LOC100130705A0A1B0GUX0 176 aa16.69■□□□□ 0.26
CLK3-225ENST00000569063 LOC107986453A0A1B0GWG9 222 aa16.69■□□□□ 0.26
CLK3-225ENST00000569063 RFPL4AA6NLU0 287 aa16.69■□□□□ 0.26
CLK3-225ENST00000569063 RFPL4AL1F8VTS6 287 aa16.69■□□□□ 0.26
CLK3-225ENST00000569063 HOXA3O43365 443 aaPredicted RBP16.69■□□□□ 0.26
CLK3-225ENST00000569063 GATBO75879 557 aaKnown RBP16.69■□□□□ 0.26
CLK3-225ENST00000569063 ISG15P05161 165 aa16.69■□□□□ 0.26
CLK3-225ENST00000569063 NDUFB7P17568 137 aa16.69■□□□□ 0.26
CLK3-225ENST00000569063 OR12D2P58182 307 aa16.69■□□□□ 0.26
CLK3-225ENST00000569063 FOXL1Q12952 345 aa16.69■□□□□ 0.26
CLK3-225ENST00000569063 IL24Q13007 206 aa16.69■□□□□ 0.26
CLK3-225ENST00000569063 CALHM1Q8IU99 346 aa16.69■□□□□ 0.26
CLK3-225ENST00000569063 RDH10Q8IZV5 341 aa16.69■□□□□ 0.26
CLK3-225ENST00000569063 Q8N7P7 452 aa16.69■□□□□ 0.26
CLK3-225ENST00000569063 LGALS12Q96DT0 336 aa16.69■□□□□ 0.26
CLK3-225ENST00000569063 Q96MT0 163 aa16.69■□□□□ 0.26
CLK3-225ENST00000569063 FAM118AQ9NWS6 357 aa16.69■□□□□ 0.26
CLK3-225ENST00000569063 FAM230AA0A1W2PPH8 454 aa16.68■□□□□ 0.26
CLK3-225ENST00000569063 H3BSH0 61 aa16.68■□□□□ 0.26
CLK3-225ENST00000569063 SERPINA3P01011 423 aa16.68■□□□□ 0.26
CLK3-225ENST00000569063 DBTP11182 482 aaKnown RBP16.68■□□□□ 0.26
CLK3-225ENST00000569063 CCR9P51686 369 aa16.68■□□□□ 0.26
CLK3-225ENST00000569063 ERVK11-1P61568 191 aa16.68■□□□□ 0.26
CLK3-225ENST00000569063 ZNF91Q05481 1191 aa16.68■□□□□ 0.26
CLK3-225ENST00000569063 TMEM244Q5VVB8 128 aa16.68■□□□□ 0.26
CLK3-225ENST00000569063 C16orf87Q6PH81 154 aa16.68■□□□□ 0.26
CLK3-225ENST00000569063 ANGPTL5Q86XS5 388 aa16.68■□□□□ 0.26
CLK3-225ENST00000569063 EGFL6Q8IUX8 553 aa16.68■□□□□ 0.26
CLK3-225ENST00000569063 CD177Q8N6Q3 437 aa16.68■□□□□ 0.26
CLK3-225ENST00000569063 TRMT10AQ8TBZ6 339 aaKnown RBP16.68■□□□□ 0.26
CLK3-225ENST00000569063 PP6455Q8WZ26 134 aa16.68■□□□□ 0.26
CLK3-225ENST00000569063 TRBV23-1A0A0A0MS06 115 aa16.67■□□□□ 0.26
CLK3-225ENST00000569063 M0R1W7 72 aa16.67■□□□□ 0.26
CLK3-225ENST00000569063 NXPH2O95156 264 aa16.67■□□□□ 0.26
CLK3-225ENST00000569063 BAG2O95816 211 aa16.67■□□□□ 0.26
CLK3-225ENST00000569063 PRDX2P32119 198 aa16.67■□□□□ 0.26
CLK3-225ENST00000569063 FUT6P51993 359 aa16.67■□□□□ 0.26
CLK3-225ENST00000569063 NANOS3P60323 173 aaKnown RBP16.67■□□□□ 0.26
CLK3-225ENST00000569063 ACTA2P62736 377 aa16.67■□□□□ 0.26
CLK3-225ENST00000569063 ACTG2P63267 376 aa16.67■□□□□ 0.26
CLK3-225ENST00000569063 GALEQ14376 348 aa16.67■□□□□ 0.26
CLK3-225ENST00000569063 PIP4P2Q8N4L2 257 aa16.67■□□□□ 0.26
CLK3-225ENST00000569063 ZNF561Q8N587 486 aa16.67■□□□□ 0.26
CLK3-225ENST00000569063 TMEM86BQ8N661 226 aa16.67■□□□□ 0.26
CLK3-225ENST00000569063 TMEM185AQ8NFB2 350 aa16.67■□□□□ 0.26
CLK3-225ENST00000569063 NPRL2Q8WTW4 380 aa16.67■□□□□ 0.26
CLK3-225ENST00000569063 MRPL48Q96GC5 212 aaKnown RBP16.67■□□□□ 0.26
CLK3-225ENST00000569063 MYCBPQ99417 103 aaPredicted RBP16.67■□□□□ 0.26
CLK3-225ENST00000569063 IGKV1-27A0A075B6S5 117 aa16.66■□□□□ 0.26
CLK3-225ENST00000569063 A0A1W2PQ09 198 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms