RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 PRRG4Q9BZD6 226 aa16.25■□□□□ 0.19
MSLN-207ENST00000566549 hCG_38984A0A1B0GV85 526 aa16.24■□□□□ 0.19
MSLN-207ENST00000566549 MPTX1A8MV57 137 aa16.24■□□□□ 0.19
MSLN-207ENST00000566549 MSTNO14793 375 aa16.24■□□□□ 0.19
MSLN-207ENST00000566549 ZNF205O95201 554 aa16.24■□□□□ 0.19
MSLN-207ENST00000566549 HLA-HP01893 362 aa16.24■□□□□ 0.19
MSLN-207ENST00000566549 MMP7P09237 267 aaPredicted RBP16.24■□□□□ 0.19
MSLN-207ENST00000566549 FPR2P25090 351 aa16.24■□□□□ 0.19
MSLN-207ENST00000566549 TAS2R46P59540 309 aa16.24■□□□□ 0.19
MSLN-207ENST00000566549 SRSF4Q08170 494 aaKnown RBP16.24■□□□□ 0.19
MSLN-207ENST00000566549 FAM74A1Q5RGS3 127 aa16.24■□□□□ 0.19
MSLN-207ENST00000566549 PLCXD3Q63HM9 321 aa16.24■□□□□ 0.19
MSLN-207ENST00000566549 MOB3CQ70IA8 216 aa16.24■□□□□ 0.19
MSLN-207ENST00000566549 CCDC54Q8NEL0 328 aa16.24■□□□□ 0.19
MSLN-207ENST00000566549 ANGPTL6Q8NI99 470 aa16.24■□□□□ 0.19
MSLN-207ENST00000566549 ADAMTS17Q8TE56 1095 aa16.24■□□□□ 0.19
MSLN-207ENST00000566549 IGKV1-12A0A0C4DH73 117 aa16.24■□□□□ 0.19
MSLN-207ENST00000566549 hCG_1807616A0A1W2PRN6 198 aa16.24■□□□□ 0.19
MSLN-207ENST00000566549 FAM221AA4D161 298 aa16.24■□□□□ 0.19
MSLN-207ENST00000566549 RNF222A6NCQ9 220 aa16.24■□□□□ 0.19
MSLN-207ENST00000566549 FIGNL2A6NMB9 653 aa16.24■□□□□ 0.19
MSLN-207ENST00000566549 IGKV1D-12P01611 117 aa16.24■□□□□ 0.19
MSLN-207ENST00000566549 LUMP51884 338 aaPredicted RBP16.24■□□□□ 0.19
MSLN-207ENST00000566549 SUPT4H1P63272 117 aaKnown RBP16.24■□□□□ 0.19
MSLN-207ENST00000566549 KRTAP27-1Q3LI81 207 aa16.24■□□□□ 0.19
MSLN-207ENST00000566549 IL22RA1Q8N6P7 574 aa16.24■□□□□ 0.19
MSLN-207ENST00000566549 THAP6Q8TBB0 222 aa16.24■□□□□ 0.19
MSLN-207ENST00000566549 EMG1Q92979 244 aaKnown RBP16.24■□□□□ 0.19
MSLN-207ENST00000566549 ZNF75AQ96N20 296 aa16.24■□□□□ 0.19
MSLN-207ENST00000566549 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.24■□□□□ 0.19
MSLN-207ENST00000566549 OSGIN2Q9Y236 505 aa16.24■□□□□ 0.19
MSLN-207ENST00000566549 DBX1A6NMT0 343 aa16.23■□□□□ 0.19
MSLN-207ENST00000566549 GEMIN2O14893 280 aaKnown RBP16.23■□□□□ 0.19
MSLN-207ENST00000566549 CRYZL1O95825 349 aa16.23■□□□□ 0.19
MSLN-207ENST00000566549 HLA-GP17693 338 aa16.23■□□□□ 0.19
MSLN-207ENST00000566549 PRKACBP22694 351 aa16.23■□□□□ 0.19
MSLN-207ENST00000566549 OPRM1P35372 400 aa16.23■□□□□ 0.19
MSLN-207ENST00000566549 ARPC4P59998 168 aa16.23■□□□□ 0.19
MSLN-207ENST00000566549 ANKRD55Q3KP44 614 aa16.23■□□□□ 0.19
MSLN-207ENST00000566549 RPUSD3Q6P087 351 aaKnown RBP16.23■□□□□ 0.19
MSLN-207ENST00000566549 TMEM65Q6PI78 240 aa16.23■□□□□ 0.19
MSLN-207ENST00000566549 OVCH2Q7RTZ1 564 aa16.23■□□□□ 0.19
MSLN-207ENST00000566549 LHFPL1Q86WI0 220 aa16.23■□□□□ 0.19
MSLN-207ENST00000566549 RBPMSQ93062 196 aaKnown RBP16.23■□□□□ 0.19
MSLN-207ENST00000566549 SDHAF2Q9NX18 166 aa16.23■□□□□ 0.19
MSLN-207ENST00000566549 KANTRA0A1W2PQU2 76 aa16.23■□□□□ 0.19
MSLN-207ENST00000566549 SYNGR4O95473 234 aa16.23■□□□□ 0.19
MSLN-207ENST00000566549 SFT2D2O95562 160 aa16.23■□□□□ 0.19
MSLN-207ENST00000566549 PGAM2P15259 253 aa16.23■□□□□ 0.19
MSLN-207ENST00000566549 LRRC20Q8TCA0 184 aa16.23■□□□□ 0.19
MSLN-207ENST00000566549 ST8SIA2Q92186 375 aa16.23■□□□□ 0.19
MSLN-207ENST00000566549 TMEM45BQ96B21 275 aa16.23■□□□□ 0.19
MSLN-207ENST00000566549 LOXL4Q96JB6 756 aa16.23■□□□□ 0.19
MSLN-207ENST00000566549 ZNF2Q9BSG1 426 aaPredicted RBP16.23■□□□□ 0.19
MSLN-207ENST00000566549 ZNF471Q9BX82 626 aaPredicted RBP16.23■□□□□ 0.19
MSLN-207ENST00000566549 NARFLQ9H6Q4 476 aa16.23■□□□□ 0.19
MSLN-207ENST00000566549 CHMP1AQ9HD42 196 aaPredicted RBP16.23■□□□□ 0.19
MSLN-207ENST00000566549 AK3Q9UIJ7 227 aa16.23■□□□□ 0.19
MSLN-207ENST00000566549 TTC28Q96AY4 2481 aa16.22■□□□□ 0.19
MSLN-207ENST00000566549 A0A0D9SG52 128 aa16.22■□□□□ 0.19
MSLN-207ENST00000566549 SFTPBP07988 381 aa16.22■□□□□ 0.19
MSLN-207ENST00000566549 SLC25A4P12235 298 aa16.22■□□□□ 0.19
MSLN-207ENST00000566549 ZNF708P17019 499 aa16.22■□□□□ 0.19
MSLN-207ENST00000566549 RGS7BPQ6MZT1 257 aaPredicted RBP16.22■□□□□ 0.19
MSLN-207ENST00000566549 LHFPL2Q6ZUX7 228 aa16.22■□□□□ 0.19
MSLN-207ENST00000566549 RFPL4BQ6ZWI9 263 aa16.22■□□□□ 0.19
MSLN-207ENST00000566549 PEG10Q86TG7 708 aaKnown RBP16.22■□□□□ 0.19
MSLN-207ENST00000566549 KCNRGQ8N5I3 272 aa16.22■□□□□ 0.19
MSLN-207ENST00000566549 ZSCAN4Q8NAM6 433 aaPredicted RBP16.22■□□□□ 0.19
MSLN-207ENST00000566549 WBP1Q96G27 269 aa16.22■□□□□ 0.19
MSLN-207ENST00000566549 URB1O60287 2271 aaKnown RBP16.22■□□□□ 0.19
MSLN-207ENST00000566549 ZNF503-AS2A6NEH8 195 aa16.21■□□□□ 0.19
MSLN-207ENST00000566549 TUBAL3A6NHL2 446 aa16.21■□□□□ 0.19
MSLN-207ENST00000566549 MEOX1P50221 254 aa16.21■□□□□ 0.19
MSLN-207ENST00000566549 AIMP2Q13155 320 aaKnown RBP16.21■□□□□ 0.19
MSLN-207ENST00000566549 FBXL14Q8N1E6 418 aa16.21■□□□□ 0.19
MSLN-207ENST00000566549 TMEM185AQ8NFB2 350 aa16.21■□□□□ 0.19
MSLN-207ENST00000566549 SULT4A1Q9BR01 284 aa16.21■□□□□ 0.19
MSLN-207ENST00000566549 GPR160Q9UJ42 338 aa16.21■□□□□ 0.19
MSLN-207ENST00000566549 CSAG2Q9Y5P2 127 aa16.21■□□□□ 0.19
MSLN-207ENST00000566549 FAM186AA6NE01 2351 aa16.21■□□□□ 0.19
MSLN-207ENST00000566549 ZNF407Q9C0G0 2248 aa16.21■□□□□ 0.19
MSLN-207ENST00000566549 MED13Q9UHV7 2174 aa16.21■□□□□ 0.19
MSLN-207ENST00000566549 LOC400499M0QZD8 3231 aa16.21■□□□□ 0.19
MSLN-207ENST00000566549 IGKV3D-15A0A087WSY6 115 aa16.21■□□□□ 0.19
MSLN-207ENST00000566549 ZNF850A8MQ14 1090 aa16.21■□□□□ 0.19
MSLN-207ENST00000566549 CRHP06850 196 aa16.21■□□□□ 0.19
MSLN-207ENST00000566549 TGIF1Q15583 401 aa16.21■□□□□ 0.19
MSLN-207ENST00000566549 TMEM42Q69YG0 159 aa16.21■□□□□ 0.19
MSLN-207ENST00000566549 BHLHE23Q8NDY6 225 aa16.21■□□□□ 0.19
MSLN-207ENST00000566549 RYDENQ9NUL5 291 aaKnown RBP16.21■□□□□ 0.19
MSLN-207ENST00000566549 COQ3Q9NZJ6 369 aa16.21■□□□□ 0.19
MSLN-207ENST00000566549 SLC7A11Q9UPY5 501 aa16.21■□□□□ 0.19
MSLN-207ENST00000566549 LIPGQ9Y5X9 500 aa16.21■□□□□ 0.19
MSLN-207ENST00000566549 FREM1Q5H8C1 2179 aa16.21■□□□□ 0.18
MSLN-207ENST00000566549 C5orf49A4QMS7 147 aa16.2■□□□□ 0.18
MSLN-207ENST00000566549 CEACAM18A8MTB9 384 aa16.2■□□□□ 0.18
MSLN-207ENST00000566549 LINC01387J3KSC0 135 aa16.2■□□□□ 0.18
MSLN-207ENST00000566549 OR2F2O95006 317 aa16.2■□□□□ 0.18
MSLN-207ENST00000566549 CD79AP11912 226 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms