RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 MNDAP41218 407 aa16.28■□□□□ 0.2
CSPG4P13-201ENST00000565545 MMP15P51511 669 aa16.28■□□□□ 0.2
CSPG4P13-201ENST00000565545 KLF3P57682 345 aaPredicted RBP16.28■□□□□ 0.2
CSPG4P13-201ENST00000565545 MZT1Q08AG7 82 aa16.28■□□□□ 0.2
CSPG4P13-201ENST00000565545 PDZK1IP1Q13113 114 aa16.28■□□□□ 0.2
CSPG4P13-201ENST00000565545 BEX5Q5H9J7 111 aa16.28■□□□□ 0.2
CSPG4P13-201ENST00000565545 DMRTC1Q5HYR2 192 aa16.28■□□□□ 0.2
CSPG4P13-201ENST00000565545 C16orf87Q6PH81 154 aa16.28■□□□□ 0.2
CSPG4P13-201ENST00000565545 SLC22A25Q6T423 547 aa16.28■□□□□ 0.2
CSPG4P13-201ENST00000565545 RNF144BQ7Z419 303 aa16.28■□□□□ 0.2
CSPG4P13-201ENST00000565545 ZNF573Q86YE8 665 aa16.28■□□□□ 0.2
CSPG4P13-201ENST00000565545 SAXO1Q8IYX7 474 aa16.28■□□□□ 0.2
CSPG4P13-201ENST00000565545 OR13G1Q8NGZ3 307 aa16.28■□□□□ 0.2
CSPG4P13-201ENST00000565545 OR8S1Q8NH09 359 aa16.28■□□□□ 0.2
CSPG4P13-201ENST00000565545 LINC01560Q8TB33 94 aa16.28■□□□□ 0.2
CSPG4P13-201ENST00000565545 RFT1Q96AA3 541 aa16.28■□□□□ 0.2
CSPG4P13-201ENST00000565545 PHF21AQ96BD5 680 aa16.28■□□□□ 0.2
CSPG4P13-201ENST00000565545 C1orf147Q96MC9 270 aaPredicted RBP16.28■□□□□ 0.2
CSPG4P13-201ENST00000565545 NKX3-1Q99801 234 aaPredicted RBP16.28■□□□□ 0.2
CSPG4P13-201ENST00000565545 SRRQ9GZT4 340 aa16.28■□□□□ 0.2
CSPG4P13-201ENST00000565545 METTL9Q9H1A3 318 aa16.28■□□□□ 0.2
CSPG4P13-201ENST00000565545 NKIRAS2Q9NYR9 191 aa16.28■□□□□ 0.2
CSPG4P13-201ENST00000565545 SPG11Q96JI7 2443 aa16.28■□□□□ 0.2
CSPG4P13-201ENST00000565545 TMEM210A6NLX4 147 aa16.27■□□□□ 0.2
CSPG4P13-201ENST00000565545 CTAG2O75638 210 aa16.27■□□□□ 0.2
CSPG4P13-201ENST00000565545 CD3EP07766 207 aa16.27■□□□□ 0.2
CSPG4P13-201ENST00000565545 ZNF79Q15937 498 aa16.27■□□□□ 0.2
CSPG4P13-201ENST00000565545 ALKBH6Q3KRA9 238 aa16.27■□□□□ 0.2
CSPG4P13-201ENST00000565545 RAB12Q6IQ22 244 aa16.27■□□□□ 0.2
CSPG4P13-201ENST00000565545 PLPPR2Q96GM1 343 aa16.27■□□□□ 0.2
CSPG4P13-201ENST00000565545 NUDT16L1Q9BRJ7 211 aaKnown RBP16.27■□□□□ 0.2
CSPG4P13-201ENST00000565545 ADAT1Q9BUB4 502 aaKnown RBP16.27■□□□□ 0.2
CSPG4P13-201ENST00000565545 NPDC1Q9NQX5 325 aaPredicted RBP16.27■□□□□ 0.2
CSPG4P13-201ENST00000565545 IL36GQ9NZH8 169 aa16.27■□□□□ 0.2
CSPG4P13-201ENST00000565545 ZFHX3Q15911 3703 aa16.27■□□□□ 0.19
CSPG4P13-201ENST00000565545 XRCC3O43542 346 aa16.26■□□□□ 0.19
CSPG4P13-201ENST00000565545 CYB5AP00167 134 aa16.26■□□□□ 0.19
CSPG4P13-201ENST00000565545 IGFBP2P18065 325 aa16.26■□□□□ 0.19
CSPG4P13-201ENST00000565545 GPM6AP51674 278 aa16.26■□□□□ 0.19
CSPG4P13-201ENST00000565545 EFNB2P52799 333 aa16.26■□□□□ 0.19
CSPG4P13-201ENST00000565545 UNC119Q13432 240 aa16.26■□□□□ 0.19
CSPG4P13-201ENST00000565545 OR8G1Q15617 311 aa16.26■□□□□ 0.19
CSPG4P13-201ENST00000565545 ZNF181Q2M3W8 571 aa16.26■□□□□ 0.19
CSPG4P13-201ENST00000565545 PYDC2Q56P42 97 aa16.26■□□□□ 0.19
CSPG4P13-201ENST00000565545 FAM76BQ5HYJ3 339 aa16.26■□□□□ 0.19
CSPG4P13-201ENST00000565545 TMEM255AQ5JRV8 349 aa16.26■□□□□ 0.19
CSPG4P13-201ENST00000565545 MKXQ8IYA7 352 aa16.26■□□□□ 0.19
CSPG4P13-201ENST00000565545 OR5D18Q8NGL1 313 aa16.26■□□□□ 0.19
CSPG4P13-201ENST00000565545 FAM46BQ96A09 425 aa16.26■□□□□ 0.19
CSPG4P13-201ENST00000565545 MRPL24Q96A35 216 aaKnown RBP16.26■□□□□ 0.19
CSPG4P13-201ENST00000565545 POM121Q96HA1 1249 aa16.26■□□□□ 0.19
CSPG4P13-201ENST00000565545 URM1Q9BTM9 101 aaKnown RBP16.26■□□□□ 0.19
CSPG4P13-201ENST00000565545 PKIBQ9C010 78 aa16.26■□□□□ 0.19
CSPG4P13-201ENST00000565545 FGF23Q9GZV9 251 aaPredicted RBP16.26■□□□□ 0.19
CSPG4P13-201ENST00000565545 ATG5Q9H1Y0 275 aa16.26■□□□□ 0.19
CSPG4P13-201ENST00000565545 CA10Q9NS85 328 aa16.26■□□□□ 0.19
CSPG4P13-201ENST00000565545 ATP23Q9Y6H3 246 aa16.26■□□□□ 0.19
CSPG4P13-201ENST00000565545 NF1P21359 2839 aa16.25■□□□□ 0.19
CSPG4P13-201ENST00000565545 CADP27708 2225 aa16.25■□□□□ 0.19
CSPG4P13-201ENST00000565545 CTDSPLO15194 276 aa16.25■□□□□ 0.19
CSPG4P13-201ENST00000565545 CDC14BO60729 498 aa16.25■□□□□ 0.19
CSPG4P13-201ENST00000565545 UPK1BO75841 260 aa16.25■□□□□ 0.19
CSPG4P13-201ENST00000565545 KDM4BO94953 1096 aa16.25■□□□□ 0.19
CSPG4P13-201ENST00000565545 CHRM2P08172 466 aa16.25■□□□□ 0.19
CSPG4P13-201ENST00000565545 CD99P14209 185 aa16.25■□□□□ 0.19
CSPG4P13-201ENST00000565545 CDK2P24941 298 aa16.25■□□□□ 0.19
CSPG4P13-201ENST00000565545 RSU1Q15404 277 aa16.25■□□□□ 0.19
CSPG4P13-201ENST00000565545 SLC22A6Q4U2R8 563 aa16.25■□□□□ 0.19
CSPG4P13-201ENST00000565545 TMEM69Q5SWH9 247 aa16.25■□□□□ 0.19
CSPG4P13-201ENST00000565545 C1QL2Q7Z5L3 287 aa16.25■□□□□ 0.19
CSPG4P13-201ENST00000565545 DMRTC2Q8IXT2 367 aaPredicted RBP16.25■□□□□ 0.19
CSPG4P13-201ENST00000565545 ZNF611Q8N823 705 aa16.25■□□□□ 0.19
CSPG4P13-201ENST00000565545 OR51F2Q8NH61 342 aa16.25■□□□□ 0.19
CSPG4P13-201ENST00000565545 MRPS24Q96EL2 167 aaKnown RBP16.25■□□□□ 0.19
CSPG4P13-201ENST00000565545 SDHCQ99643 169 aaPredicted RBP16.25■□□□□ 0.19
CSPG4P13-201ENST00000565545 TMEM59Q9BXS4 323 aa16.25■□□□□ 0.19
CSPG4P13-201ENST00000565545 CXXC4Q9H2H0 198 aa16.25■□□□□ 0.19
CSPG4P13-201ENST00000565545 KCNK15Q9H427 330 aa16.25■□□□□ 0.19
CSPG4P13-201ENST00000565545 C14orf119Q9NWQ9 140 aa16.25■□□□□ 0.19
CSPG4P13-201ENST00000565545 DUSP13Q9UII6 198 aa16.25■□□□□ 0.19
CSPG4P13-201ENST00000565545 FZR1Q9UM11 496 aa16.25■□□□□ 0.19
CSPG4P13-201ENST00000565545 A0A0G2JMP0 313 aa16.24■□□□□ 0.19
CSPG4P13-201ENST00000565545 A0A0X1KG70 313 aa16.24■□□□□ 0.19
CSPG4P13-201ENST00000565545 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.24■□□□□ 0.19
CSPG4P13-201ENST00000565545 LRP5LA4QPB2 252 aa16.24■□□□□ 0.19
CSPG4P13-201ENST00000565545 SPRY1O43609 319 aaPredicted RBP16.24■□□□□ 0.19
CSPG4P13-201ENST00000565545 CRTAPO75718 401 aaPredicted RBP16.24■□□□□ 0.19
CSPG4P13-201ENST00000565545 CSTBP04080 98 aaKnown RBP16.24■□□□□ 0.19
CSPG4P13-201ENST00000565545 HAAOP46952 286 aa16.24■□□□□ 0.19
CSPG4P13-201ENST00000565545 MRPS10P82664 201 aaKnown RBP16.24■□□□□ 0.19
CSPG4P13-201ENST00000565545 PLA2G7Q13093 441 aa16.24■□□□□ 0.19
CSPG4P13-201ENST00000565545 MSMPQ1L6U9 139 aa16.24■□□□□ 0.19
CSPG4P13-201ENST00000565545 OR10K2Q6IF99 312 aa16.24■□□□□ 0.19
CSPG4P13-201ENST00000565545 VHLLQ6RSH7 139 aa16.24■□□□□ 0.19
CSPG4P13-201ENST00000565545 CALHM1Q8IU99 346 aa16.24■□□□□ 0.19
CSPG4P13-201ENST00000565545 OR4M2Q8NGB6 313 aa16.24■□□□□ 0.19
CSPG4P13-201ENST00000565545 OR51I2Q9H344 312 aa16.24■□□□□ 0.19
CSPG4P13-201ENST00000565545 ELL3Q9HB65 397 aaPredicted RBP16.24■□□□□ 0.19
CSPG4P13-201ENST00000565545 RHOFQ9HBH0 211 aa16.24■□□□□ 0.19
CSPG4P13-201ENST00000565545 POU2F3Q9UKI9 436 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms