RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 FAM220AQ7Z4H9 259 aa15.19■□□□□ 0.02
CLN6-204ENST00000564752 LINC01006Q8NI28 216 aa15.19■□□□□ 0.02
CLN6-204ENST00000564752 NPRL2Q8WTW4 380 aa15.19■□□□□ 0.02
CLN6-204ENST00000564752 TRUB1Q8WWH5 349 aaKnown RBP15.19■□□□□ 0.02
CLN6-204ENST00000564752 HRASLS5Q96KN8 279 aa15.19■□□□□ 0.02
CLN6-204ENST00000564752 ONECUT1Q9UBC0 465 aa15.19■□□□□ 0.02
CLN6-204ENST00000564752 NLKQ9UBE8 527 aa15.19■□□□□ 0.02
CLN6-204ENST00000564752 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.19■□□□□ 0.02
CLN6-204ENST00000564752 SLC22A13Q9Y226 551 aa15.19■□□□□ 0.02
CLN6-204ENST00000564752 RNF114Q9Y508 228 aa15.19■□□□□ 0.02
CLN6-204ENST00000564752 V9GYS6 101 aa15.19■□□□□ 0.02
CLN6-204ENST00000564752 WNK1Q9H4A3 2382 aa15.19■□□□□ 0.02
CLN6-204ENST00000564752 A0A1B0GTI1 187 aa15.18■□□□□ 0.02
CLN6-204ENST00000564752 METTL15A6NJ78 407 aa15.18■□□□□ 0.02
CLN6-204ENST00000564752 SULT1C4O75897 302 aa15.18■□□□□ 0.02
CLN6-204ENST00000564752 ODF4Q2M2E3 257 aa15.18■□□□□ 0.02
CLN6-204ENST00000564752 CMTM4Q8IZR5 234 aa15.18■□□□□ 0.02
CLN6-204ENST00000564752 CBR4Q8N4T8 237 aa15.18■□□□□ 0.02
CLN6-204ENST00000564752 OR14K1Q8NGZ2 314 aa15.18■□□□□ 0.02
CLN6-204ENST00000564752 ZNF671Q8TAW3 534 aa15.18■□□□□ 0.02
CLN6-204ENST00000564752 DCTN5Q9BTE1 182 aa15.18■□□□□ 0.02
CLN6-204ENST00000564752 DPAGT1Q9H3H5 408 aa15.18■□□□□ 0.02
CLN6-204ENST00000564752 PLEKHA1Q9HB21 404 aa15.18■□□□□ 0.02
CLN6-204ENST00000564752 GPR173Q9NS66 373 aa15.18■□□□□ 0.02
CLN6-204ENST00000564752 FAM96BQ9Y3D0 163 aa15.18■□□□□ 0.02
CLN6-204ENST00000564752 NOTCH1P46531 2555 aa15.17■□□□□ 0.02
CLN6-204ENST00000564752 OR2AT4A6NND4 320 aa15.17■□□□□ 0.02
CLN6-204ENST00000564752 DHRS7CA6NNS2 312 aa15.17■□□□□ 0.02
CLN6-204ENST00000564752 DLGAP1O14490 977 aa15.17■□□□□ 0.02
CLN6-204ENST00000564752 CLPXO76031 633 aa15.17■□□□□ 0.02
CLN6-204ENST00000564752 SELLP14151 372 aa15.17■□□□□ 0.02
CLN6-204ENST00000564752 MIDNQ504T8 468 aa15.17■□□□□ 0.02
CLN6-204ENST00000564752 ZNF788Q6ZQV5 615 aa15.17■□□□□ 0.02
CLN6-204ENST00000564752 CATSPERDQ86XM0 798 aa15.17■□□□□ 0.02
CLN6-204ENST00000564752 Q8N7P7 452 aa15.17■□□□□ 0.02
CLN6-204ENST00000564752 ZSCAN4Q8NAM6 433 aaPredicted RBP15.17■□□□□ 0.02
CLN6-204ENST00000564752 ANGPTL6Q8NI99 470 aa15.17■□□□□ 0.02
CLN6-204ENST00000564752 C8orf46Q8TAG6 207 aa15.17■□□□□ 0.02
CLN6-204ENST00000564752 AQP3Q92482 292 aa15.17■□□□□ 0.02
CLN6-204ENST00000564752 H1FXQ92522 213 aaKnown RBP15.17■□□□□ 0.02
CLN6-204ENST00000564752 UBE2FQ969M7 185 aa15.17■□□□□ 0.02
CLN6-204ENST00000564752 MED30Q96HR3 178 aa15.17■□□□□ 0.02
CLN6-204ENST00000564752 GAFA1Q96PS6 74 aa15.17■□□□□ 0.02
CLN6-204ENST00000564752 C9orf16Q9BUW7 83 aa15.17■□□□□ 0.02
CLN6-204ENST00000564752 SIRT7Q9NRC8 400 aa15.17■□□□□ 0.02
CLN6-204ENST00000564752 GNG8Q9UK08 70 aa15.17■□□□□ 0.02
CLN6-204ENST00000564752 M0QZ24 198 aa15.16■□□□□ 0.02
CLN6-204ENST00000564752 TIMM23O14925 209 aa15.16■□□□□ 0.02
CLN6-204ENST00000564752 ENTPD6O75354 484 aa15.16■□□□□ 0.02
CLN6-204ENST00000564752 TFF1P04155 84 aa15.16■□□□□ 0.02
CLN6-204ENST00000564752 CCL1P22362 96 aa15.16■□□□□ 0.02
CLN6-204ENST00000564752 HAAOP46952 286 aa15.16■□□□□ 0.02
CLN6-204ENST00000564752 GABRA2P47869 451 aa15.16■□□□□ 0.02
CLN6-204ENST00000564752 PROK1P58294 105 aa15.16■□□□□ 0.02
CLN6-204ENST00000564752 ACTC1P68032 377 aa15.16■□□□□ 0.02
CLN6-204ENST00000564752 ACTA1P68133 377 aa15.16■□□□□ 0.02
CLN6-204ENST00000564752 TAF9Q16594 264 aa15.16■□□□□ 0.02
CLN6-204ENST00000564752 MEDAGQ5VYS4 303 aa15.16■□□□□ 0.02
CLN6-204ENST00000564752 TMEM42Q69YG0 159 aa15.16■□□□□ 0.02
CLN6-204ENST00000564752 ASPHD2Q6ICH7 369 aa15.16■□□□□ 0.02
CLN6-204ENST00000564752 GDPGP1Q6ZNW5 385 aa15.16■□□□□ 0.02
CLN6-204ENST00000564752 C1orf122Q6ZSJ8 110 aa15.16■□□□□ 0.02
CLN6-204ENST00000564752 ZNF573Q86YE8 665 aa15.16■□□□□ 0.02
CLN6-204ENST00000564752 RORBQ92753 470 aa15.16■□□□□ 0.02
CLN6-204ENST00000564752 RNFT2Q96EX2 444 aa15.16■□□□□ 0.02
CLN6-204ENST00000564752 S100A14Q9HCY8 104 aa15.16■□□□□ 0.02
CLN6-204ENST00000564752 SLC25A10Q9UBX3 287 aaPredicted RBP15.16■□□□□ 0.02
CLN6-204ENST00000564752 CAB39Q9Y376 341 aaPredicted RBP15.16■□□□□ 0.02
CLN6-204ENST00000564752 PRKDCP78527 4128 aaKnown RBP15.15■□□□□ 0.02
CLN6-204ENST00000564752 A6NIN4 97 aa15.15■□□□□ 0.02
CLN6-204ENST00000564752 RNASEK-C17orf49H0YIS7 233 aa15.15■□□□□ 0.02
CLN6-204ENST00000564752 H3BSH0 61 aa15.15■□□□□ 0.02
CLN6-204ENST00000564752 J3QT63 122 aa15.15■□□□□ 0.02
CLN6-204ENST00000564752 SIGLEC5O15389 551 aa15.15■□□□□ 0.02
CLN6-204ENST00000564752 SYT7O43581 403 aa15.15■□□□□ 0.02
CLN6-204ENST00000564752 FBP1P09467 338 aa15.15■□□□□ 0.02
CLN6-204ENST00000564752 SNRPGP62308 76 aaKnown RBP15.15■□□□□ 0.02
CLN6-204ENST00000564752 GUCA2AQ02747 115 aa15.15■□□□□ 0.02
CLN6-204ENST00000564752 ZNF85Q03923 595 aa15.15■□□□□ 0.02
CLN6-204ENST00000564752 DGUOKQ16854 277 aa15.15■□□□□ 0.02
CLN6-204ENST00000564752 SMIM21Q3B7S5 101 aa15.15■□□□□ 0.02
CLN6-204ENST00000564752 TP53I3Q53FA7 332 aa15.15■□□□□ 0.02
CLN6-204ENST00000564752 Q6ZSR3 168 aa15.15■□□□□ 0.02
CLN6-204ENST00000564752 Q6ZSV7 163 aa15.15■□□□□ 0.02
CLN6-204ENST00000564752 PQLC1Q8N2U9 271 aa15.15■□□□□ 0.02
CLN6-204ENST00000564752 POC1AQ8NBT0 407 aa15.15■□□□□ 0.02
CLN6-204ENST00000564752 TNFRSF14Q92956 283 aa15.15■□□□□ 0.02
CLN6-204ENST00000564752 MBOAT4Q96T53 435 aa15.15■□□□□ 0.02
CLN6-204ENST00000564752 ADI1Q9BV57 179 aa15.15■□□□□ 0.02
CLN6-204ENST00000564752 C16orf95Q9H693 158 aa15.15■□□□□ 0.02
CLN6-204ENST00000564752 ZNRD1Q9P1U0 126 aa15.15■□□□□ 0.02
CLN6-204ENST00000564752 POLDIP2Q9Y2S7 368 aa15.15■□□□□ 0.02
CLN6-204ENST00000564752 GMPPBQ9Y5P6 360 aa15.15■□□□□ 0.02
CLN6-204ENST00000564752 IGKV1D-17A0A075B6S4 117 aa15.14■□□□□ 0.01
CLN6-204ENST00000564752 PQLC2LA1A4F0 135 aa15.14■□□□□ 0.01
CLN6-204ENST00000564752 ANKRD61A6NGH8 418 aa15.14■□□□□ 0.01
CLN6-204ENST00000564752 SNTNA6NMZ2 147 aa15.14■□□□□ 0.01
CLN6-204ENST00000564752 SYNGR1O43759 233 aa15.14■□□□□ 0.01
CLN6-204ENST00000564752 ACAA1P09110 424 aaPredicted RBP15.14■□□□□ 0.01
CLN6-204ENST00000564752 UBCP0CG48 685 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms