RNA–Protein interactions for RNA: ENST00000564343.5

TCF4-223, Transcript of transcription factor 4, human

TSL 4

Gene TCF4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-223	ENST00000564343	CLEC3B	P05452	202 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	SELL	P14151	372 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	KDELR2	P33947	212 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	MDH1	P40925	334 aa	Known RBP	4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	KIR2DS4	P43632	304 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	CENPA	P49450	140 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	SELENOW	P63302	87 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	ZNF92	Q03936	586 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	KRR1	Q13601	381 aa	Known RBP	4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	LY6E	Q16553	131 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	PCK2	Q16822	640 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	NSUN5P1	Q3KNT7	163 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	LRRC23	Q53EV4	343 aa	Predicted RBP	4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	CYBRD1	Q53TN4	286 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	TEX36	Q5VZQ5	186 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	TMEM88	Q6PEY1	159 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	TMPRSS11F	Q6ZWK6	438 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	MBOAT2	Q6ZWT7	520 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	PGAP1	Q75T13	922 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	VTCN1	Q7Z7D3	282 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	CROCCP2	Q86T23	111 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	WDR86	Q86TI4	376 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	LINC00346	Q8IVM7	164 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	C11orf53	Q8IXP5	236 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	RNF113B	Q8IZP6	322 aa	Known RBP	4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	OFCC1	Q8IZS5	231 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	KLHDC1	Q8N7A1	406 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	FAM216B	Q8N7L0	139 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	OR2AE1	Q8NHA4	323 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	NPRL2	Q8WTW4	380 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	SPRYD4	Q8WW59	207 aa	Predicted RBP	4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	ACOT11	Q8WXI4	607 aa	Predicted RBP	4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	RORB	Q92753	470 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	TNFRSF14	Q92956	283 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	RNFT2	Q96EX2	444 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	ZNF583	Q96ND8	569 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	CCL13	Q99616	98 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	PITX2	Q99697	317 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	SSX3	Q99909	188 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	FNDC11	Q9BVV2	318 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	HIPK2	Q9H2X6	1198 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	RABEP2	Q9H5N1	569 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	PPP1R3E	Q9H7J1	279 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	TMBIM4	Q9HC24	238 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	PNRC2	Q9NPJ4	139 aa	Known RBP	4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	ARL8B	Q9NVJ2	186 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	C1orf123	Q9NWV4	160 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	KAAG1	Q9UBP8	84 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	SIGLEC7	Q9Y286	467 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	POLR1D	Q9Y2S0	133 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	CAB39	Q9Y376	341 aa	Predicted RBP	4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	IER3IP1	Q9Y5U9	82 aa		4.18	□□□□□ -1.74
TCF4-223	ENST00000564343	IGLV1-36	A0A0B4J1U3	117 aa		4.17	□□□□□ -1.74
TCF4-223	ENST00000564343		H3BUX3	64 aa		4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	4.17	□□□□□ -1.74
TCF4-223	ENST00000564343		K7EIL1	84 aa		4.17	□□□□□ -1.74
TCF4-223	ENST00000564343		M0R135	149 aa		4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	BHLHE40	O14503	412 aa		4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	ACOT8	O14734	319 aa		4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	XPNPEP2	O43895	674 aa		4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	CHST1	O43916	411 aa		4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	GMDS	O60547	372 aa		4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	NDUFB2	O95178	105 aa		4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	PAH	P00439	452 aa		4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	TFF1	P04155	84 aa		4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	T-ENOL	P0DO92	83 aa		4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	CD28	P10747	220 aa		4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	PSKH1	P11801	424 aa		4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	RPS27	P42677	84 aa	Known RBP	4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	NANOS2	P60321	138 aa	Known RBP	4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	TRAP1	Q12931	704 aa	Known RBP	4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	CYLC2	Q14093	348 aa	Predicted RBP	4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	TRAM2	Q15035	370 aa		4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	TBCE	Q15813	527 aa	Predicted RBP	4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	RFX4	Q33E94	735 aa		4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	WDR38	Q5JTN6	314 aa		4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	GLYATL3	Q5SZD4	288 aa		4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	GPR139	Q6DWJ6	353 aa		4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	ZNF730	Q6ZMV8	503 aa		4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	MRPL21	Q7Z2W9	205 aa	Known RBP	4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	TSEN54	Q7Z6J9	526 aa	Known RBP	4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	OR6V1	Q8N148	313 aa		4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	SLC26A10	Q8NG04	563 aa		4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	OR5T2	Q8NGG2	359 aa		4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	OR5R1	Q8NH85	324 aa		4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	SLC7A13	Q8TCU3	470 aa		4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	ZNF799	Q96GE5	643 aa		4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	GPX7	Q96SL4	187 aa	Predicted RBP	4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	NMNAT3	Q96T66	252 aa		4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	ATF6B	Q99941	703 aa		4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	DCTN5	Q9BTE1	182 aa		4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	CYB5R1	Q9UHQ9	305 aa		4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	PRPF19	Q9UMS4	504 aa	Known RBP	4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	B9D1	Q9UPM9	204 aa		4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	MAB21L2	Q9Y586	359 aa		4.17	□□□□□ -1.74
TCF4-223	ENST00000564343	IGLV5-39	A0A0G2JS06	123 aa		4.16	□□□□□ -1.74
TCF4-223	ENST00000564343	LOC100653049	A0A140TA62	436 aa		4.16	□□□□□ -1.74
TCF4-223	ENST00000564343	GGT3P	A6NGU5	568 aa		4.16	□□□□□ -1.74
TCF4-223	ENST00000564343	FAM220BP	B1ANY3	271 aa		4.16	□□□□□ -1.74
TCF4-223	ENST00000564343	TIPRL	O75663	272 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms