RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 PLCXD3Q63HM9 321 aa14.06□□□□□ -0.16
VPS9D1-203ENST00000563798 KDM4DQ6B0I6 523 aa14.06□□□□□ -0.16
VPS9D1-203ENST00000563798 COMMD2Q86X83 199 aa14.06□□□□□ -0.16
VPS9D1-203ENST00000563798 ZNF573Q86YE8 665 aa14.06□□□□□ -0.16
VPS9D1-203ENST00000563798 MMP27Q9H306 513 aa14.06□□□□□ -0.16
VPS9D1-203ENST00000563798 CLN6Q9NWW5 311 aa14.06□□□□□ -0.16
VPS9D1-203ENST00000563798 IKZF2Q9UKS7 526 aa14.06□□□□□ -0.16
VPS9D1-203ENST00000563798 R4GMQ9 66 aa14.06□□□□□ -0.16
VPS9D1-203ENST00000563798 PQLC2LA1A4F0 135 aa14.05□□□□□ -0.16
VPS9D1-203ENST00000563798 MEIOCA2RUB1 952 aa14.05□□□□□ -0.16
VPS9D1-203ENST00000563798 LOC110117498-PIK3R3F6TDL0 507 aa14.05□□□□□ -0.16
VPS9D1-203ENST00000563798 J3QT63 122 aa14.05□□□□□ -0.16
VPS9D1-203ENST00000563798 PAHP00439 452 aa14.05□□□□□ -0.16
VPS9D1-203ENST00000563798 CCL1P22362 96 aa14.05□□□□□ -0.16
VPS9D1-203ENST00000563798 MPZP25189 248 aa14.05□□□□□ -0.16
VPS9D1-203ENST00000563798 PRB3Q04118 309 aaPredicted RBP14.05□□□□□ -0.16
VPS9D1-203ENST00000563798 AANATQ16613 207 aa14.05□□□□□ -0.16
VPS9D1-203ENST00000563798 DHRS7BQ6IAN0 325 aaPredicted RBP14.05□□□□□ -0.16
VPS9D1-203ENST00000563798 BCDIN3DQ7Z5W3 292 aaKnown RBP14.05□□□□□ -0.16
VPS9D1-203ENST00000563798 SLC35F2Q8IXU6 374 aa14.05□□□□□ -0.16
VPS9D1-203ENST00000563798 PNKDQ8N490 385 aa14.05□□□□□ -0.16
VPS9D1-203ENST00000563798 ZNF561Q8N587 486 aa14.05□□□□□ -0.16
VPS9D1-203ENST00000563798 C11orf42Q8N5U0 333 aa14.05□□□□□ -0.16
VPS9D1-203ENST00000563798 CD177Q8N6Q3 437 aa14.05□□□□□ -0.16
VPS9D1-203ENST00000563798 TMEM185AQ8NFB2 350 aa14.05□□□□□ -0.16
VPS9D1-203ENST00000563798 OR14K1Q8NGZ2 314 aa14.05□□□□□ -0.16
VPS9D1-203ENST00000563798 AJUBAQ96IF1 538 aa14.05□□□□□ -0.16
VPS9D1-203ENST00000563798 APOL4Q9BPW4 351 aa14.05□□□□□ -0.16
VPS9D1-203ENST00000563798 NRIP2Q9BQI9 281 aa14.05□□□□□ -0.16
VPS9D1-203ENST00000563798 GABARAPL1Q9H0R8 117 aa14.05□□□□□ -0.16
VPS9D1-203ENST00000563798 MEGF9Q9H1U4 602 aa14.05□□□□□ -0.16
VPS9D1-203ENST00000563798 ELL3Q9HB65 397 aaPredicted RBP14.05□□□□□ -0.16
VPS9D1-203ENST00000563798 HES4Q9HCC6 221 aa14.05□□□□□ -0.16
VPS9D1-203ENST00000563798 KRT84Q9NSB2 600 aa14.05□□□□□ -0.16
VPS9D1-203ENST00000563798 H2AFY2Q9P0M6 372 aaPredicted RBP14.05□□□□□ -0.16
VPS9D1-203ENST00000563798 MRM2Q9UI43 246 aaKnown RBP14.05□□□□□ -0.16
VPS9D1-203ENST00000563798 OR52A1Q9UKL2 312 aa14.05□□□□□ -0.16
VPS9D1-203ENST00000563798 POLDIP2Q9Y2S7 368 aa14.05□□□□□ -0.16
VPS9D1-203ENST00000563798 SNX5Q9Y5X3 404 aa14.05□□□□□ -0.16
VPS9D1-203ENST00000563798 RFPL4AA6NLU0 287 aa14.04□□□□□ -0.16
VPS9D1-203ENST00000563798 RFPL4AL1F8VTS6 287 aa14.04□□□□□ -0.16
VPS9D1-203ENST00000563798 G3V2T6 193 aa14.04□□□□□ -0.16
VPS9D1-203ENST00000563798 MITFO75030 526 aaPredicted RBP14.04□□□□□ -0.16
VPS9D1-203ENST00000563798 EPHA2P29317 976 aa14.04□□□□□ -0.16
VPS9D1-203ENST00000563798 PRDX2P32119 198 aa14.04□□□□□ -0.16
VPS9D1-203ENST00000563798 ERVK11-1P61568 191 aa14.04□□□□□ -0.16
VPS9D1-203ENST00000563798 DEFA6Q01524 100 aa14.04□□□□□ -0.16
VPS9D1-203ENST00000563798 BNIP1Q12981 228 aa14.04□□□□□ -0.16
VPS9D1-203ENST00000563798 PDLIM3Q53GG5 364 aaPredicted RBP14.04□□□□□ -0.16
VPS9D1-203ENST00000563798 DMRTC1Q5HYR2 192 aa14.04□□□□□ -0.16
VPS9D1-203ENST00000563798 BCL2L15Q5TBC7 163 aa14.04□□□□□ -0.16
VPS9D1-203ENST00000563798 GID4Q8IVV7 300 aa14.04□□□□□ -0.16
VPS9D1-203ENST00000563798 TCEANCQ8N8B7 351 aa14.04□□□□□ -0.16
VPS9D1-203ENST00000563798 RBM4BQ9BQ04 359 aaKnown RBP14.04□□□□□ -0.16
VPS9D1-203ENST00000563798 C19orf12Q9NSK7 152 aa14.04□□□□□ -0.16
VPS9D1-203ENST00000563798 FBLN5Q9UBX5 448 aa14.04□□□□□ -0.16
VPS9D1-203ENST00000563798 ENOPH1Q9UHY7 261 aa14.04□□□□□ -0.16
VPS9D1-203ENST00000563798 A0A1W2PPH5 198 aa14.03□□□□□ -0.16
VPS9D1-203ENST00000563798 A0A1W2PRD5 423 aa14.03□□□□□ -0.16
VPS9D1-203ENST00000563798 A0A1W2PRF3 423 aa14.03□□□□□ -0.16
VPS9D1-203ENST00000563798 A0A1W2PRM7 423 aa14.03□□□□□ -0.16
VPS9D1-203ENST00000563798 ZNF670-ZNF695F2Z2N8 137 aa14.03□□□□□ -0.16
VPS9D1-203ENST00000563798 H0YAE9 185 aa14.03□□□□□ -0.16
VPS9D1-203ENST00000563798 SYNGR1O43759 233 aa14.03□□□□□ -0.16
VPS9D1-203ENST00000563798 HAAOP46952 286 aa14.03□□□□□ -0.16
VPS9D1-203ENST00000563798 CALHM1Q8IU99 346 aa14.03□□□□□ -0.16
VPS9D1-203ENST00000563798 FAM185AQ8N0U4 392 aa14.03□□□□□ -0.16
VPS9D1-203ENST00000563798 TTTY10Q9BZA0 68 aa14.03□□□□□ -0.16
VPS9D1-203ENST00000563798 PKIBQ9C010 78 aa14.03□□□□□ -0.16
VPS9D1-203ENST00000563798 FAM234AQ9H0X4 552 aa14.03□□□□□ -0.16
VPS9D1-203ENST00000563798 CMYA5Q8N3K9 4069 aa14.02□□□□□ -0.17
VPS9D1-203ENST00000563798 M0R129 80 aa14.02□□□□□ -0.17
VPS9D1-203ENST00000563798 SLC1A7O00341 560 aa14.02□□□□□ -0.17
VPS9D1-203ENST00000563798 MAGEB4O15481 346 aaPredicted RBP14.02□□□□□ -0.17
VPS9D1-203ENST00000563798 RPL31P62899 125 aaKnown RBP14.02□□□□□ -0.17
VPS9D1-203ENST00000563798 TMEM200BQ69YZ2 307 aa14.02□□□□□ -0.17
VPS9D1-203ENST00000563798 CRIP3Q6Q6R5 217 aa14.02□□□□□ -0.17
VPS9D1-203ENST00000563798 ZDHHC13Q8IUH4 622 aa14.02□□□□□ -0.17
VPS9D1-203ENST00000563798 ZNF488Q96MN9 340 aa14.02□□□□□ -0.17
VPS9D1-203ENST00000563798 HEXA-AS1Q9H8Q6 139 aa14.02□□□□□ -0.17
VPS9D1-203ENST00000563798 TCF7L1Q9HCS4 588 aa14.02□□□□□ -0.17
VPS9D1-203ENST00000563798 GPR173Q9NS66 373 aa14.02□□□□□ -0.17
VPS9D1-203ENST00000563798 WARS2Q9UGM6 360 aaKnown RBP14.02□□□□□ -0.17
VPS9D1-203ENST00000563798 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.02□□□□□ -0.17
VPS9D1-203ENST00000563798 WNK1Q9H4A3 2382 aa14.02□□□□□ -0.17
VPS9D1-203ENST00000563798 OR2T7P0C7T2 308 aa14.01□□□□□ -0.17
VPS9D1-203ENST00000563798 FASP25445 335 aa14.01□□□□□ -0.17
VPS9D1-203ENST00000563798 CAPZA1P52907 286 aa14.01□□□□□ -0.17
VPS9D1-203ENST00000563798 IL24Q13007 206 aa14.01□□□□□ -0.17
VPS9D1-203ENST00000563798 SLC35E4Q6ICL7 350 aa14.01□□□□□ -0.17
VPS9D1-203ENST00000563798 MKXQ8IYA7 352 aa14.01□□□□□ -0.17
VPS9D1-203ENST00000563798 CCDC54Q8NEL0 328 aa14.01□□□□□ -0.17
VPS9D1-203ENST00000563798 OR2T27Q8NH04 317 aa14.01□□□□□ -0.17
VPS9D1-203ENST00000563798 C17orf50Q8WW18 174 aa14.01□□□□□ -0.17
VPS9D1-203ENST00000563798 IL4I1Q96RQ9 567 aa14.01□□□□□ -0.17
VPS9D1-203ENST00000563798 USE1Q9NZ43 259 aa14.01□□□□□ -0.17
VPS9D1-203ENST00000563798 SLC22A13Q9Y226 551 aa14.01□□□□□ -0.17
VPS9D1-203ENST00000563798 AP4S1Q9Y587 144 aa14.01□□□□□ -0.17
VPS9D1-203ENST00000563798 hCG_1809904A0A1W2PP81 198 aa14□□□□□ -0.17
VPS9D1-203ENST00000563798 A0A1W2PPE2 198 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms