RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 TMEM38BQ9NVV0 291 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 MRM2Q9UI43 246 aaKnown RBP6.68□□□□□ -1.34
TCF4-216ENST00000562680 MPC1Q9Y5U8 109 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 GBF1Q92538 1859 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 ABCD4O14678 606 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 NKX2-8O15522 239 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 CRHP06850 196 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 GIFP27352 417 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 CEBPDP49716 269 aaPredicted RBP6.68□□□□□ -1.34
TCF4-216ENST00000562680 FAM27BQ5VT28 67 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 INO80CQ6PI98 192 aaPredicted RBP6.68□□□□□ -1.34
TCF4-216ENST00000562680 SEZ6L2Q6UXD5 910 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 APOOLQ6UXV4 268 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 SLC38A9Q8NBW4 561 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 GTF3AQ92664 365 aaKnown RBP6.68□□□□□ -1.34
TCF4-216ENST00000562680 ELOVL1Q9BW60 279 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 CHST6Q9GZX3 395 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 DECR2Q9NUI1 292 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 ING1Q9UK53 422 aaPredicted RBP6.68□□□□□ -1.34
TCF4-216ENST00000562680 FAM186AA6NE01 2351 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 KIAA1671Q9BY89 1806 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 MARCH11A6NNE9 402 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 SERPINE3A8MV23 424 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 KLF4O43474 513 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 HYAL3O43820 417 aaPredicted RBP6.68□□□□□ -1.34
TCF4-216ENST00000562680 CELA2AP08217 269 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 AKR1C4P17516 323 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 AKR1C2P52895 323 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 ERVK-16P61578 105 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 SEC61A1P61619 476 aaKnown RBP6.68□□□□□ -1.34
TCF4-216ENST00000562680 PLA2G7Q13093 441 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 FBXW9Q5XUX1 488 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 VHLLQ6RSH7 139 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 OR5D18Q8NGL1 313 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 OR51F2Q8NH61 342 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 TOMM40LQ969M1 308 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 TIMD4Q96H15 378 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 LINC00052Q96N35 136 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 ZNF649Q9BS31 505 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 COL4A4P53420 1690 aaPredicted RBP6.68□□□□□ -1.34
TCF4-216ENST00000562680 ZNF724A8MTY0 619 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 SEC14L6B5MCN3 397 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 RER1O15258 196 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 ELK1P19419 428 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 RAB6AP20340 208 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 RPS4XP62701 263 aaKnown RBP6.68□□□□□ -1.34
TCF4-216ENST00000562680 RANP62826 216 aaKnown RBP6.68□□□□□ -1.34
TCF4-216ENST00000562680 P2RY6Q15077 328 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 TFAP2EQ6VUC0 442 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 DNAAF1Q8NEP3 725 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 OR10K1Q8NGX5 313 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 WNT2BQ93097 391 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 MRPS24Q96EL2 167 aaKnown RBP6.68□□□□□ -1.34
TCF4-216ENST00000562680 TAS2R5Q9NYW4 299 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 TRAPPC2LQ9UL33 140 aa6.68□□□□□ -1.34
TCF4-216ENST00000562680 SIAH2O43255 324 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 ALDOBP05062 364 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 NDUFB7P17568 137 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 ZNF239Q16600 458 aaKnown RBP6.67□□□□□ -1.34
TCF4-216ENST00000562680 SLC22A25Q6T423 547 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 SLC30A7Q8NEW0 376 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 CITED1Q99966 193 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 CYSLTR2Q9NS75 346 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 PURGQ9UJV8 347 aaKnown RBP6.67□□□□□ -1.34
TCF4-216ENST00000562680 ATP23Q9Y6H3 246 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 OPN1MWP04001 364 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 UMODP07911 640 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 OPN1MW2P0DN77 364 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 OPN1MW3P0DN78 364 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 RAP2BP61225 183 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 CLINT1Q14677 625 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 ATXN7L3Q14CW9 347 aaPredicted RBP6.67□□□□□ -1.34
TCF4-216ENST00000562680 VAMP3Q15836 100 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 TMEM95Q3KNT9 176 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 ALKAL2Q6UX46 152 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 TMEM108Q6UXF1 575 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 OR1J1Q8NGS3 322 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 NKX3-1Q99801 234 aaPredicted RBP6.67□□□□□ -1.34
TCF4-216ENST00000562680 TMEM100Q9NV29 134 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 STARD10Q9Y365 291 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 CHCHD2Q9Y6H1 151 aaPredicted RBP6.67□□□□□ -1.34
TCF4-216ENST00000562680 GPR179Q6PRD1 2367 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 IGKV1D-42A0A075B6H8 117 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 OR4C45A6NMZ5 311 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 C9orf172C9J069 976 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 SH2D1BO14796 132 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 DEGS1O15121 323 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 SCGB2A1O75556 95 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 SPDEFO95238 335 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 PTBP3O95758 552 aaKnown RBP6.67□□□□□ -1.34
TCF4-216ENST00000562680 SFTPBP07988 381 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 TNFRSF1AP19438 455 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 ROM1Q03395 351 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 C2orf76Q3KRA6 126 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 H3F3CQ6NXT2 135 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 RDH10Q8IZV5 341 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 OR6K3Q8NGY3 331 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 RAB24Q969Q5 203 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 KIRREL1Q96J84 757 aa6.67□□□□□ -1.34
TCF4-216ENST00000562680 RHOVQ96L33 236 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms