RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 ALDH3B1P43353 468 aa16.45■□□□□ 0.22
RAB40C-206ENST00000561781 NOVA1P51513 510 aaKnown RBP16.45■□□□□ 0.22
RAB40C-206ENST00000561781 ELLP55199 621 aaPredicted RBP16.45■□□□□ 0.22
RAB40C-206ENST00000561781 VAMP2P63027 116 aa16.45■□□□□ 0.22
RAB40C-206ENST00000561781 TMEM225Q6GV28 225 aa16.45■□□□□ 0.22
RAB40C-206ENST00000561781 ZNF550Q7Z398 422 aa16.45■□□□□ 0.22
RAB40C-206ENST00000561781 ZNF761Q86XN6 746 aaPredicted RBP16.45■□□□□ 0.22
RAB40C-206ENST00000561781 OR14L1PQ8NHC6 308 aa16.45■□□□□ 0.22
RAB40C-206ENST00000561781 ZNF514Q96K75 400 aaPredicted RBP16.45■□□□□ 0.22
RAB40C-206ENST00000561781 C4orf45Q96LM5 186 aa16.45■□□□□ 0.22
RAB40C-206ENST00000561781 ARPC3O15145 178 aa16.45■□□□□ 0.22
RAB40C-206ENST00000561781 FPR2P25090 351 aa16.45■□□□□ 0.22
RAB40C-206ENST00000561781 RANP62826 216 aaKnown RBP16.45■□□□□ 0.22
RAB40C-206ENST00000561781 PRDX1Q06830 199 aaKnown RBP16.45■□□□□ 0.22
RAB40C-206ENST00000561781 BATFQ16520 125 aa16.45■□□□□ 0.22
RAB40C-206ENST00000561781 TAF9Q16594 264 aa16.45■□□□□ 0.22
RAB40C-206ENST00000561781 SGPP2Q8IWX5 399 aa16.45■□□□□ 0.22
RAB40C-206ENST00000561781 GBGT1Q8N5D6 347 aa16.45■□□□□ 0.22
RAB40C-206ENST00000561781 TSLPQ969D9 159 aa16.45■□□□□ 0.22
RAB40C-206ENST00000561781 NKD1Q969G9 470 aa16.45■□□□□ 0.22
RAB40C-206ENST00000561781 TP53RKQ96S44 253 aa16.45■□□□□ 0.22
RAB40C-206ENST00000561781 SH3BGRL3Q9H299 93 aa16.45■□□□□ 0.22
RAB40C-206ENST00000561781 SCN3AQ9NY46 2000 aa16.44■□□□□ 0.22
RAB40C-206ENST00000561781 TMEM196Q5HYL7 178 aa16.44■□□□□ 0.22
RAB40C-206ENST00000561781 TMEM182Q6ZP80 229 aaPredicted RBP16.44■□□□□ 0.22
RAB40C-206ENST00000561781 P4HA3Q7Z4N8 544 aa16.44■□□□□ 0.22
RAB40C-206ENST00000561781 CHST4Q8NCG5 386 aa16.44■□□□□ 0.22
RAB40C-206ENST00000561781 TUBD1Q9UJT1 453 aa16.44■□□□□ 0.22
RAB40C-206ENST00000561781 GPR34Q9UPC5 381 aa16.44■□□□□ 0.22
RAB40C-206ENST00000561781 A0A1B0GU03 582 aa16.44■□□□□ 0.22
RAB40C-206ENST00000561781 WIPF3A6NGB9 483 aa16.44■□□□□ 0.22
RAB40C-206ENST00000561781 OR3A2P47893 321 aa16.44■□□□□ 0.22
RAB40C-206ENST00000561781 FOXF1Q12946 379 aa16.44■□□□□ 0.22
RAB40C-206ENST00000561781 ZNF506Q5JVG8 444 aa16.44■□□□□ 0.22
RAB40C-206ENST00000561781 ZAR1Q86SH2 424 aa16.44■□□□□ 0.22
RAB40C-206ENST00000561781 ORAOV1Q8WV07 137 aa16.44■□□□□ 0.22
RAB40C-206ENST00000561781 SRA1Q9HD15 236 aaKnown RBP16.44■□□□□ 0.22
RAB40C-206ENST00000561781 SEPSECSQ9HD40 501 aaKnown RBP16.44■□□□□ 0.22
RAB40C-206ENST00000561781 GRHPRQ9UBQ7 328 aa16.44■□□□□ 0.22
RAB40C-206ENST00000561781 WNT16Q9UBV4 365 aa16.44■□□□□ 0.22
RAB40C-206ENST00000561781 LIPGQ9Y5X9 500 aa16.44■□□□□ 0.22
RAB40C-206ENST00000561781 MEGF11A6BM72 1044 aa16.43■□□□□ 0.22
RAB40C-206ENST00000561781 E5RGE8 158 aa16.43■□□□□ 0.22
RAB40C-206ENST00000561781 CCL25O15444 150 aa16.43■□□□□ 0.22
RAB40C-206ENST00000561781 CCL20P78556 96 aa16.43■□□□□ 0.22
RAB40C-206ENST00000561781 ICAM4Q14773 271 aa16.43■□□□□ 0.22
RAB40C-206ENST00000561781 DPY19L4Q7Z388 723 aa16.43■□□□□ 0.22
RAB40C-206ENST00000561781 UBALD2Q8IYN6 164 aa16.43■□□□□ 0.22
RAB40C-206ENST00000561781 OR2A1Q8NGT9 310 aa16.43■□□□□ 0.22
RAB40C-206ENST00000561781 OR6N2Q8NGY6 317 aa16.43■□□□□ 0.22
RAB40C-206ENST00000561781 CTDSP1Q9GZU7 261 aa16.43■□□□□ 0.22
RAB40C-206ENST00000561781 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.43■□□□□ 0.22
RAB40C-206ENST00000561781 TM7SF3Q9NS93 570 aa16.43■□□□□ 0.22
RAB40C-206ENST00000561781 AURKAIP1Q9NWT8 199 aaPredicted RBP16.43■□□□□ 0.22
RAB40C-206ENST00000561781 APOBEC3BQ9UH17 382 aaKnown RBP16.43■□□□□ 0.22
RAB40C-206ENST00000561781 NSG2Q9Y328 171 aa16.43■□□□□ 0.22
RAB40C-206ENST00000561781 ETV2O00321 342 aaPredicted RBP16.43■□□□□ 0.22
RAB40C-206ENST00000561781 OPN1LWP04000 364 aa16.43■□□□□ 0.22
RAB40C-206ENST00000561781 ACAA2P42765 397 aaKnown RBP16.43■□□□□ 0.22
RAB40C-206ENST00000561781 BTN3A2P78410 334 aa16.43■□□□□ 0.22
RAB40C-206ENST00000561781 VAX1Q5SQQ9 334 aa16.43■□□□□ 0.22
RAB40C-206ENST00000561781 OR8G2PQ6IF36 304 aa16.43■□□□□ 0.22
RAB40C-206ENST00000561781 LRRC69Q6ZNQ3 347 aa16.43■□□□□ 0.22
RAB40C-206ENST00000561781 PARS2Q7L3T8 475 aaKnown RBP16.43■□□□□ 0.22
RAB40C-206ENST00000561781 AMZ2Q86W34 360 aa16.43■□□□□ 0.22
RAB40C-206ENST00000561781 OR10G4Q8NGN3 311 aa16.43■□□□□ 0.22
RAB40C-206ENST00000561781 FAM46BQ96A09 425 aa16.43■□□□□ 0.22
RAB40C-206ENST00000561781 SLC35E1Q96K37 410 aa16.43■□□□□ 0.22
RAB40C-206ENST00000561781 WFDC1Q9HC57 220 aa16.43■□□□□ 0.22
RAB40C-206ENST00000561781 C1orf123Q9NWV4 160 aa16.43■□□□□ 0.22
RAB40C-206ENST00000561781 DHDHQ9UQ10 334 aa16.43■□□□□ 0.22
RAB40C-206ENST00000561781 LSM5Q9Y4Y9 91 aaKnown RBP16.43■□□□□ 0.22
RAB40C-206ENST00000561781 CACNA1CQ13936 2221 aa16.42■□□□□ 0.22
RAB40C-206ENST00000561781 SPEGQ15772 3267 aa16.42■□□□□ 0.22
RAB40C-206ENST00000561781 MED19A0JLT2 244 aaPredicted RBP16.42■□□□□ 0.22
RAB40C-206ENST00000561781 DCDC2BA2VCK2 349 aa16.42■□□□□ 0.22
RAB40C-206ENST00000561781 EMDP50402 254 aa16.42■□□□□ 0.22
RAB40C-206ENST00000561781 FZD2Q14332 565 aa16.42■□□□□ 0.22
RAB40C-206ENST00000561781 GPR157Q5UAW9 335 aa16.42■□□□□ 0.22
RAB40C-206ENST00000561781 LINC00114Q6XXX2 140 aa16.42■□□□□ 0.22
RAB40C-206ENST00000561781 OR2L3Q8NG85 312 aa16.42■□□□□ 0.22
RAB40C-206ENST00000561781 CORO2AQ92828 525 aa16.42■□□□□ 0.22
RAB40C-206ENST00000561781 NUS1Q96E22 293 aa16.42■□□□□ 0.22
RAB40C-206ENST00000561781 RTBDNQ9BSG5 229 aaPredicted RBP16.42■□□□□ 0.22
RAB40C-206ENST00000561781 MKKSQ9NPJ1 570 aaPredicted RBP16.42■□□□□ 0.22
RAB40C-206ENST00000561781 P4HTMQ9NXG6 502 aa16.42■□□□□ 0.22
RAB40C-206ENST00000561781 B3GAT1Q9P2W7 334 aa16.42■□□□□ 0.22
RAB40C-206ENST00000561781 LRRK1Q38SD2 2015 aa16.42■□□□□ 0.22
RAB40C-206ENST00000561781 GPR137BO60478 399 aa16.41■□□□□ 0.22
RAB40C-206ENST00000561781 TNFSF13O75888 250 aa16.41■□□□□ 0.22
RAB40C-206ENST00000561781 KIR2DL1P43626 348 aaPredicted RBP16.41■□□□□ 0.22
RAB40C-206ENST00000561781 P2RY6Q15077 328 aa16.41■□□□□ 0.22
RAB40C-206ENST00000561781 RNF151Q2KHN1 245 aa16.41■□□□□ 0.22
RAB40C-206ENST00000561781 TMEM176BQ3YBM2 270 aaPredicted RBP16.41■□□□□ 0.22
RAB40C-206ENST00000561781 SPSB3Q6PJ21 355 aa16.41■□□□□ 0.22
RAB40C-206ENST00000561781 ZNF66Q6ZN08 573 aa16.41■□□□□ 0.22
RAB40C-206ENST00000561781 FNDC9Q8TBE3 224 aa16.41■□□□□ 0.22
RAB40C-206ENST00000561781 PPP1R14AQ96A00 147 aa16.41■□□□□ 0.22
RAB40C-206ENST00000561781 FGGYQ96C11 551 aa16.41■□□□□ 0.22
RAB40C-206ENST00000561781 AMELYQ99218 206 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms