RNA–Protein interactions for RNA: ENST00000559718.1

USP3-214, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-214ENST00000559718 SNAPC1Q16533 368 aa9.46□□□□□ -0.9
USP3-214ENST00000559718 C2orf68Q2NKX9 166 aa9.46□□□□□ -0.9
USP3-214ENST00000559718 TMEM200BQ69YZ2 307 aa9.46□□□□□ -0.9
USP3-214ENST00000559718 KCTD18Q6PI47 426 aaPredicted RBP9.46□□□□□ -0.9
USP3-214ENST00000559718 BCDIN3DQ7Z5W3 292 aaKnown RBP9.46□□□□□ -0.9
USP3-214ENST00000559718 AQP12AQ8IXF9 295 aa9.46□□□□□ -0.9
USP3-214ENST00000559718 C11orf42Q8N5U0 333 aa9.46□□□□□ -0.9
USP3-214ENST00000559718 C11orf44Q8N8P7 122 aa9.46□□□□□ -0.9
USP3-214ENST00000559718 POC1AQ8NBT0 407 aa9.46□□□□□ -0.9
USP3-214ENST00000559718 CCDC197Q8NCU1 140 aa9.46□□□□□ -0.9
USP3-214ENST00000559718 OR4M1Q8NGD0 313 aa9.46□□□□□ -0.9
USP3-214ENST00000559718 OR51G2Q8NGK0 314 aa9.46□□□□□ -0.9
USP3-214ENST00000559718 OR5D13Q8NGL4 314 aa9.46□□□□□ -0.9
USP3-214ENST00000559718 OR8B4Q96RC9 309 aa9.46□□□□□ -0.9
USP3-214ENST00000559718 MROQ9BYG7 248 aa9.46□□□□□ -0.9
USP3-214ENST00000559718 FBLN5Q9UBX5 448 aa9.46□□□□□ -0.9
USP3-214ENST00000559718 FOXJ3Q9UPW0 622 aa9.46□□□□□ -0.9
USP3-214ENST00000559718 TRBV23-1A0A0A0MS06 115 aa9.45□□□□□ -0.9
USP3-214ENST00000559718 A0A0G2JK05 382 aa9.45□□□□□ -0.9
USP3-214ENST00000559718 A6NIN4 97 aa9.45□□□□□ -0.9
USP3-214ENST00000559718 ACOD1A6NK06 481 aa9.45□□□□□ -0.9
USP3-214ENST00000559718 OR5B21A6NL26 309 aa9.45□□□□□ -0.9
USP3-214ENST00000559718 GSC2O15499 205 aa9.45□□□□□ -0.9
USP3-214ENST00000559718 CHST1O43916 411 aa9.45□□□□□ -0.9
USP3-214ENST00000559718 PRKYO43930 277 aa9.45□□□□□ -0.9
USP3-214ENST00000559718 FKBP6O75344 327 aa9.45□□□□□ -0.9
USP3-214ENST00000559718 SRSF10O75494 262 aaKnown RBP9.45□□□□□ -0.9
USP3-214ENST00000559718 NRASP01111 189 aa9.45□□□□□ -0.9
USP3-214ENST00000559718 TTRP02766 147 aa9.45□□□□□ -0.9
USP3-214ENST00000559718 CSF1P09603 554 aa9.45□□□□□ -0.9
USP3-214ENST00000559718 CCL3L1P16619 93 aa9.45□□□□□ -0.9
USP3-214ENST00000559718 COX7A1P24310 79 aa9.45□□□□□ -0.9
USP3-214ENST00000559718 HAAOP46952 286 aa9.45□□□□□ -0.9
USP3-214ENST00000559718 BMXP51813 675 aa9.45□□□□□ -0.9
USP3-214ENST00000559718 EFNB2P52799 333 aa9.45□□□□□ -0.9
USP3-214ENST00000559718 RPL31P62899 125 aaKnown RBP9.45□□□□□ -0.9
USP3-214ENST00000559718 CBX1P83916 185 aa9.45□□□□□ -0.9
USP3-214ENST00000559718 ROM1Q03395 351 aa9.45□□□□□ -0.9
USP3-214ENST00000559718 ZNF273Q14593 569 aa9.45□□□□□ -0.9
USP3-214ENST00000559718 CRIP3Q6Q6R5 217 aa9.45□□□□□ -0.9
USP3-214ENST00000559718 DEGS2Q6QHC5 323 aa9.45□□□□□ -0.9
USP3-214ENST00000559718 PLEKHG7Q6ZR37 379 aa9.45□□□□□ -0.9
USP3-214ENST00000559718 SPATA24Q86W54 205 aa9.45□□□□□ -0.9
USP3-214ENST00000559718 ZNF679Q8IYX0 411 aa9.45□□□□□ -0.9
USP3-214ENST00000559718 APOL4Q9BPW4 351 aa9.45□□□□□ -0.9
USP3-214ENST00000559718 MEGF9Q9H1U4 602 aa9.45□□□□□ -0.9
USP3-214ENST00000559718 C1orf21Q9H246 121 aa9.45□□□□□ -0.9
USP3-214ENST00000559718 GPR173Q9NS66 373 aa9.45□□□□□ -0.9
USP3-214ENST00000559718 NUFIP1Q9UHK0 495 aaKnown RBP9.45□□□□□ -0.9
USP3-214ENST00000559718 ENPP5Q9UJA9 477 aa9.45□□□□□ -0.9
USP3-214ENST00000559718 IKZF2Q9UKS7 526 aa9.45□□□□□ -0.9
USP3-214ENST00000559718 DHRS3O75911 302 aa9.44□□□□□ -0.9
USP3-214ENST00000559718 FAM107AO95990 144 aa9.44□□□□□ -0.9
USP3-214ENST00000559718 PGA5P0DJD9 388 aa9.44□□□□□ -0.9
USP3-214ENST00000559718 ATP6V1B1P15313 513 aa9.44□□□□□ -0.9
USP3-214ENST00000559718 PRDX2P32119 198 aa9.44□□□□□ -0.9
USP3-214ENST00000559718 RIDAP52758 137 aaKnown RBP9.44□□□□□ -0.9
USP3-214ENST00000559718 CRISP1P54107 249 aa9.44□□□□□ -0.9
USP3-214ENST00000559718 HERPUD1Q15011 391 aa9.44□□□□□ -0.9
USP3-214ENST00000559718 LRRC75BQ2VPJ9 315 aa9.44□□□□□ -0.9
USP3-214ENST00000559718 SMIM21Q3B7S5 101 aa9.44□□□□□ -0.9
USP3-214ENST00000559718 ZNF829Q3KNS6 432 aaPredicted RBP9.44□□□□□ -0.9
USP3-214ENST00000559718 ZNF684Q5T5D7 378 aa9.44□□□□□ -0.9
USP3-214ENST00000559718 ZNF782Q6ZMW2 699 aaPredicted RBP9.44□□□□□ -0.9
USP3-214ENST00000559718 LHFPL4Q7Z7J7 247 aa9.44□□□□□ -0.9
USP3-214ENST00000559718 ZNF561Q8N587 486 aa9.44□□□□□ -0.9
USP3-214ENST00000559718 OR5K1Q8NHB7 308 aa9.44□□□□□ -0.9
USP3-214ENST00000559718 PIFOQ8TCI5 191 aa9.44□□□□□ -0.9
USP3-214ENST00000559718 ASB17Q8WXJ9 295 aa9.44□□□□□ -0.9
USP3-214ENST00000559718 TEX12Q9BXU0 123 aa9.44□□□□□ -0.9
USP3-214ENST00000559718 PAPOLBQ9NRJ5 636 aaKnown RBP9.44□□□□□ -0.9
USP3-214ENST00000559718 RASL12Q9NYN1 266 aa9.44□□□□□ -0.9
USP3-214ENST00000559718 DNAJB9Q9UBS3 223 aa9.44□□□□□ -0.9
USP3-214ENST00000559718 GTF2A1LQ9UNN4 478 aa9.44□□□□□ -0.9
USP3-214ENST00000559718 A0A1B0GTI1 187 aa9.43□□□□□ -0.9
USP3-214ENST00000559718 TCRBV3S1A0A5B6 114 aa9.43□□□□□ -0.9
USP3-214ENST00000559718 PQLC2LA1A4F0 135 aa9.43□□□□□ -0.9
USP3-214ENST00000559718 MEX3AA1L020 520 aaKnown RBP9.43□□□□□ -0.9
USP3-214ENST00000559718 LOC110117498-PIK3R3F6TDL0 507 aa9.43□□□□□ -0.9
USP3-214ENST00000559718 G3V4G9 280 aa9.43□□□□□ -0.9
USP3-214ENST00000559718 J3QT63 122 aa9.43□□□□□ -0.9
USP3-214ENST00000559718 MITFO75030 526 aaPredicted RBP9.43□□□□□ -0.9
USP3-214ENST00000559718 ZNF254O75437 659 aa9.43□□□□□ -0.9
USP3-214ENST00000559718 PIPP12273 146 aaPredicted RBP9.43□□□□□ -0.9
USP3-214ENST00000559718 EPHA2P29317 976 aa9.43□□□□□ -0.9
USP3-214ENST00000559718 KIR2DS4P43632 304 aa9.43□□□□□ -0.9
USP3-214ENST00000559718 DAPP51397 102 aa9.43□□□□□ -0.9
USP3-214ENST00000559718 CXCR4P61073 352 aa9.43□□□□□ -0.9
USP3-214ENST00000559718 ESRRGP62508 458 aa9.43□□□□□ -0.9
USP3-214ENST00000559718 FLOT2Q14254 428 aa9.43□□□□□ -0.9
USP3-214ENST00000559718 PTGES3Q15185 160 aaKnown RBP9.43□□□□□ -0.9
USP3-214ENST00000559718 PLA1AQ53H76 456 aa9.43□□□□□ -0.9
USP3-214ENST00000559718 CLVS2Q5SYC1 327 aa9.43□□□□□ -0.9
USP3-214ENST00000559718 ZBTB37Q5TC79 503 aa9.43□□□□□ -0.9
USP3-214ENST00000559718 LCN1P1Q5VSP4 162 aa9.43□□□□□ -0.9
USP3-214ENST00000559718 TMEM42Q69YG0 159 aa9.43□□□□□ -0.9
USP3-214ENST00000559718 FAHD1Q6P587 224 aa9.43□□□□□ -0.9
USP3-214ENST00000559718 ZNF322Q6U7Q0 402 aaPredicted RBP9.43□□□□□ -0.9
USP3-214ENST00000559718 Q6ZTK2 550 aa9.43□□□□□ -0.9
USP3-214ENST00000559718 ASRGL1Q7L266 308 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms