RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 MUC20Q8N307 709 aaPredicted RBP18.18■□□□□ 0.5
SNX1-206ENST00000559389 BOLLQ8N9W6 283 aaKnown RBP18.18■□□□□ 0.5
SNX1-206ENST00000559389 POC1AQ8NBT0 407 aa18.18■□□□□ 0.5
SNX1-206ENST00000559389 C19orf18Q8NEA5 215 aa18.18■□□□□ 0.5
SNX1-206ENST00000559389 ZNF671Q8TAW3 534 aa18.18■□□□□ 0.5
SNX1-206ENST00000559389 SPACA5Q96QH8 159 aa18.18■□□□□ 0.5
SNX1-206ENST00000559389 GAL3ST1Q99999 423 aa18.18■□□□□ 0.5
SNX1-206ENST00000559389 TMUB1Q9BVT8 246 aa18.18■□□□□ 0.5
SNX1-206ENST00000559389 VCX3AQ9NNX9 186 aa18.18■□□□□ 0.5
SNX1-206ENST00000559389 TMEM138Q9NPI0 162 aa18.18■□□□□ 0.5
SNX1-206ENST00000559389 FOXJ3Q9UPW0 622 aa18.18■□□□□ 0.5
SNX1-206ENST00000559389 MAGEA13PA6NCF6 341 aa18.17■□□□□ 0.5
SNX1-206ENST00000559389 OOEPA6NGQ2 149 aa18.17■□□□□ 0.5
SNX1-206ENST00000559389 PLATP00750 562 aa18.17■□□□□ 0.5
SNX1-206ENST00000559389 UCHL1P09936 223 aa18.17■□□□□ 0.5
SNX1-206ENST00000559389 PGA5P0DJD9 388 aa18.17■□□□□ 0.5
SNX1-206ENST00000559389 TGFBR2P37173 567 aa18.17■□□□□ 0.5
SNX1-206ENST00000559389 ZNF404Q494X3 552 aa18.17■□□□□ 0.5
SNX1-206ENST00000559389 TEX36Q5VZQ5 186 aa18.17■□□□□ 0.5
SNX1-206ENST00000559389 CD200R1LQ6Q8B3 271 aa18.17■□□□□ 0.5
SNX1-206ENST00000559389 RNF144BQ7Z419 303 aa18.17■□□□□ 0.5
SNX1-206ENST00000559389 CEACAM19Q7Z692 300 aa18.17■□□□□ 0.5
SNX1-206ENST00000559389 MAPK1IP1LQ8NDC0 245 aa18.17■□□□□ 0.5
SNX1-206ENST00000559389 CPNE2Q96FN4 548 aaPredicted RBP18.17■□□□□ 0.5
SNX1-206ENST00000559389 GABRPO00591 440 aa18.16■□□□□ 0.5
SNX1-206ENST00000559389 AKR7A2O43488 359 aa18.16■□□□□ 0.5
SNX1-206ENST00000559389 ALDOBP05062 364 aa18.16■□□□□ 0.5
SNX1-206ENST00000559389 BDKRB2P30411 391 aa18.16■□□□□ 0.5
SNX1-206ENST00000559389 POU3F4P49335 361 aa18.16■□□□□ 0.5
SNX1-206ENST00000559389 KISS1Q15726 138 aa18.16■□□□□ 0.5
SNX1-206ENST00000559389 DDI2Q5TDH0 399 aa18.16■□□□□ 0.5
SNX1-206ENST00000559389 SLC25A26Q70HW3 274 aa18.16■□□□□ 0.5
SNX1-206ENST00000559389 SPICQ8N5J4 248 aa18.16■□□□□ 0.5
SNX1-206ENST00000559389 OR52N4Q8NGI2 321 aa18.16■□□□□ 0.5
SNX1-206ENST00000559389 PHYHIPQ92561 330 aa18.16■□□□□ 0.5
SNX1-206ENST00000559389 RFT1Q96AA3 541 aa18.16■□□□□ 0.5
SNX1-206ENST00000559389 C18orf12Q96KH6 178 aa18.16■□□□□ 0.5
SNX1-206ENST00000559389 NRIP2Q9BQI9 281 aa18.16■□□□□ 0.5
SNX1-206ENST00000559389 TMEM165Q9HC07 324 aa18.16■□□□□ 0.5
SNX1-206ENST00000559389 ITPR3Q14573 2671 aa18.15■□□□□ 0.5
SNX1-206ENST00000559389 C3orf80F5H4A9 247 aa18.15■□□□□ 0.5
SNX1-206ENST00000559389 SMAD7O15105 426 aaKnown RBP18.15■□□□□ 0.5
SNX1-206ENST00000559389 MAGEB3O15480 346 aa18.15■□□□□ 0.5
SNX1-206ENST00000559389 NOS1APO75052 506 aaPredicted RBP18.15■□□□□ 0.5
SNX1-206ENST00000559389 IGHV2-5P01817 119 aa18.15■□□□□ 0.5
SNX1-206ENST00000559389 ACAA1P09110 424 aaPredicted RBP18.15■□□□□ 0.5
SNX1-206ENST00000559389 JUNBP17275 347 aaPredicted RBP18.15■□□□□ 0.5
SNX1-206ENST00000559389 IL2RGP31785 369 aa18.15■□□□□ 0.5
SNX1-206ENST00000559389 ZP1P60852 638 aa18.15■□□□□ 0.5
SNX1-206ENST00000559389 HSD17B12Q53GQ0 312 aa18.15■□□□□ 0.5
SNX1-206ENST00000559389 SFRP4Q6FHJ7 346 aaPredicted RBP18.15■□□□□ 0.5
SNX1-206ENST00000559389 FAM90A1Q86YD7 464 aa18.15■□□□□ 0.5
SNX1-206ENST00000559389 OR5D18Q8NGL1 313 aa18.15■□□□□ 0.5
SNX1-206ENST00000559389 ZNF488Q96MN9 340 aa18.15■□□□□ 0.5
SNX1-206ENST00000559389 TMEM246Q9BRR3 403 aa18.15■□□□□ 0.5
SNX1-206ENST00000559389 WDR13Q9H1Z4 485 aa18.15■□□□□ 0.5
SNX1-206ENST00000559389 PPIL3Q9H2H8 161 aaKnown RBP18.15■□□□□ 0.5
SNX1-206ENST00000559389 TRAV38-1A0A0B4J264 116 aa18.14■□□□□ 0.49
SNX1-206ENST00000559389 CEACAM18A8MTB9 384 aa18.14■□□□□ 0.49
SNX1-206ENST00000559389 CD99P14209 185 aa18.14■□□□□ 0.49
SNX1-206ENST00000559389 GALP22466 123 aa18.14■□□□□ 0.49
SNX1-206ENST00000559389 ERVK11-1P61568 191 aa18.14■□□□□ 0.49
SNX1-206ENST00000559389 LMO4P61968 165 aa18.14■□□□□ 0.49
SNX1-206ENST00000559389 PDZK1IP1Q13113 114 aa18.14■□□□□ 0.49
SNX1-206ENST00000559389 NKAIN3Q8N8D7 197 aa18.14■□□□□ 0.49
SNX1-206ENST00000559389 DEFB108BQ8NET1 73 aa18.14■□□□□ 0.49
SNX1-206ENST00000559389 SLAMF9Q96A28 289 aa18.14■□□□□ 0.49
SNX1-206ENST00000559389 C12orf43Q96C57 262 aaKnown RBP18.14■□□□□ 0.49
SNX1-206ENST00000559389 RAB39BQ96DA2 213 aa18.14■□□□□ 0.49
SNX1-206ENST00000559389 SEH1LQ96EE3 360 aa18.14■□□□□ 0.49
SNX1-206ENST00000559389 ZNF665Q9H7R5 613 aa18.14■□□□□ 0.49
SNX1-206ENST00000559389 AKAP9Q99996 3911 aa18.14■□□□□ 0.49
SNX1-206ENST00000559389 IGHV3OR15-7A0A075B7D8 119 aa18.13■□□□□ 0.49
SNX1-206ENST00000559389 TRDV1A0A1B0GX56 115 aa18.13■□□□□ 0.49
SNX1-206ENST00000559389 F5H0A9 414 aaPredicted RBP18.13■□□□□ 0.49
SNX1-206ENST00000559389 ARL6IP5O75915 188 aa18.13■□□□□ 0.49
SNX1-206ENST00000559389 FOSL1P15407 271 aa18.13■□□□□ 0.49
SNX1-206ENST00000559389 MUC1P15941 1255 aaPredicted RBP18.13■□□□□ 0.49
SNX1-206ENST00000559389 GLRA1P23415 457 aa18.13■□□□□ 0.49
SNX1-206ENST00000559389 GMFBP60983 142 aa18.13■□□□□ 0.49
SNX1-206ENST00000559389 KCNJ8Q15842 424 aa18.13■□□□□ 0.49
SNX1-206ENST00000559389 TMEM249Q2WGJ8 235 aa18.13■□□□□ 0.49
SNX1-206ENST00000559389 STUMQ69YW2 141 aa18.13■□□□□ 0.49
SNX1-206ENST00000559389 DCDC5Q6ZRR9 648 aa18.13■□□□□ 0.49
SNX1-206ENST00000559389 SAXO1Q8IYX7 474 aa18.13■□□□□ 0.49
SNX1-206ENST00000559389 CEP19Q96LK0 163 aa18.13■□□□□ 0.49
SNX1-206ENST00000559389 PATZ1Q9HBE1 687 aaKnown RBP18.13■□□□□ 0.49
SNX1-206ENST00000559389 HES4Q9HCC6 221 aa18.13■□□□□ 0.49
SNX1-206ENST00000559389 TCF7L1Q9HCS4 588 aa18.13■□□□□ 0.49
SNX1-206ENST00000559389 RASL12Q9NYN1 266 aa18.13■□□□□ 0.49
SNX1-206ENST00000559389 MTCH1Q9NZJ7 389 aa18.13■□□□□ 0.49
SNX1-206ENST00000559389 MAST4O15021 2626 aa18.12■□□□□ 0.49
SNX1-206ENST00000559389 IGKV1-12A0A0C4DH73 117 aa18.12■□□□□ 0.49
SNX1-206ENST00000559389 SPRY1O43609 319 aaPredicted RBP18.12■□□□□ 0.49
SNX1-206ENST00000559389 CYB5AP00167 134 aa18.12■□□□□ 0.49
SNX1-206ENST00000559389 IGKV1D-12P01611 117 aa18.12■□□□□ 0.49
SNX1-206ENST00000559389 MAS1P04201 325 aa18.12■□□□□ 0.49
SNX1-206ENST00000559389 INHBBP09529 407 aa18.12■□□□□ 0.49
SNX1-206ENST00000559389 ZNF93P35789 620 aaPredicted RBP18.12■□□□□ 0.49
SNX1-206ENST00000559389 MICBQ29980 383 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms