RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 CHST11Q9NPF2 352 aa14.26□□□□□ -0.13
HMBOX1-212ENST00000558662 CDS2O95674 445 aa14.25□□□□□ -0.13
HMBOX1-212ENST00000558662 MPIG6BO95866 241 aa14.25□□□□□ -0.13
HMBOX1-212ENST00000558662 H2BFMP0C1H6 154 aa14.25□□□□□ -0.13
HMBOX1-212ENST00000558662 ZNF20P17024 532 aa14.25□□□□□ -0.13
HMBOX1-212ENST00000558662 KLK2P20151 261 aa14.25□□□□□ -0.13
HMBOX1-212ENST00000558662 ATP6V0CP27449 155 aa14.25□□□□□ -0.13
HMBOX1-212ENST00000558662 APLNRP35414 380 aa14.25□□□□□ -0.13
HMBOX1-212ENST00000558662 TMEM50BP56557 158 aa14.25□□□□□ -0.13
HMBOX1-212ENST00000558662 INSM1Q01101 510 aaPredicted RBP14.25□□□□□ -0.13
HMBOX1-212ENST00000558662 EWSR1Q01844 656 aaKnown RBP eCLIP14.25□□□□□ -0.134e-8■■■□□ 17.2
HMBOX1-212ENST00000558662 TMEM187Q14656 261 aa14.25□□□□□ -0.13
HMBOX1-212ENST00000558662 ZNF77Q15935 545 aa14.25□□□□□ -0.13
HMBOX1-212ENST00000558662 CYB5R2Q6BCY4 276 aa14.25□□□□□ -0.13
HMBOX1-212ENST00000558662 LCN10Q6JVE6 187 aa14.25□□□□□ -0.13
HMBOX1-212ENST00000558662 ZNF774Q6NX45 483 aa14.25□□□□□ -0.13
HMBOX1-212ENST00000558662 KLHL24Q6TFL4 600 aa14.25□□□□□ -0.13
HMBOX1-212ENST00000558662 CA13Q8N1Q1 262 aa14.25□□□□□ -0.13
HMBOX1-212ENST00000558662 BCORP1Q8N888 145 aa14.25□□□□□ -0.13
HMBOX1-212ENST00000558662 RNF133Q8WVZ7 376 aa14.25□□□□□ -0.13
HMBOX1-212ENST00000558662 HAS2Q92819 552 aa14.25□□□□□ -0.13
HMBOX1-212ENST00000558662 BOD1Q96IK1 185 aa14.25□□□□□ -0.13
HMBOX1-212ENST00000558662 C18orf12Q96KH6 178 aa14.25□□□□□ -0.13
HMBOX1-212ENST00000558662 C1orf147Q96MC9 270 aaPredicted RBP14.25□□□□□ -0.13
HMBOX1-212ENST00000558662 ZNF558Q96NG5 402 aa14.25□□□□□ -0.13
HMBOX1-212ENST00000558662 HIST1H2AAQ96QV6 131 aa14.25□□□□□ -0.13
HMBOX1-212ENST00000558662 NICN1Q9BSH3 213 aa14.25□□□□□ -0.13
HMBOX1-212ENST00000558662 NAA60Q9H7X0 242 aa14.25□□□□□ -0.13
HMBOX1-212ENST00000558662 PADI1Q9ULC6 663 aa14.25□□□□□ -0.13
HMBOX1-212ENST00000558662 CCL26Q9Y258 94 aa14.25□□□□□ -0.13
HMBOX1-212ENST00000558662 HIDE1A8MVS5 230 aa14.24□□□□□ -0.13
HMBOX1-212ENST00000558662 K7EQS6 105 aa14.24□□□□□ -0.13
HMBOX1-212ENST00000558662 P2RY10O00398 339 aa14.24□□□□□ -0.13
HMBOX1-212ENST00000558662 SOCS1O15524 211 aa14.24□□□□□ -0.13
HMBOX1-212ENST00000558662 FGF5P12034 268 aa14.24□□□□□ -0.13
HMBOX1-212ENST00000558662 FUT3P21217 361 aa14.24□□□□□ -0.13
HMBOX1-212ENST00000558662 METAP1P53582 386 aa14.24□□□□□ -0.13
HMBOX1-212ENST00000558662 CCL20P78556 96 aa14.24□□□□□ -0.13
HMBOX1-212ENST00000558662 FBXW12Q6X9E4 464 aa14.24□□□□□ -0.13
HMBOX1-212ENST00000558662 CENPVQ7Z7K6 275 aaPredicted RBP14.24□□□□□ -0.13
HMBOX1-212ENST00000558662 WFIKKN1Q96NZ8 548 aa14.24□□□□□ -0.13
HMBOX1-212ENST00000558662 C20orf144Q9BQM9 153 aa14.24□□□□□ -0.13
HMBOX1-212ENST00000558662 AGMATQ9BSE5 352 aa14.24□□□□□ -0.13
HMBOX1-212ENST00000558662 PLEKHF2Q9H8W4 249 aa14.24□□□□□ -0.13
HMBOX1-212ENST00000558662 FAM206AQ9NX38 181 aa14.24□□□□□ -0.13
HMBOX1-212ENST00000558662 RNF150Q9ULK6 438 aa14.24□□□□□ -0.13
HMBOX1-212ENST00000558662 NPIPB13A6NJU9 1138 aa14.24□□□□□ -0.13
HMBOX1-212ENST00000558662 NPIPB4C9JG80 1138 aa14.24□□□□□ -0.13
HMBOX1-212ENST00000558662 DXOO77932 396 aaKnown RBP14.24□□□□□ -0.13
HMBOX1-212ENST00000558662 P2RY2P41231 377 aa14.24□□□□□ -0.13
HMBOX1-212ENST00000558662 POLR2HP52434 150 aaKnown RBP14.24□□□□□ -0.13
HMBOX1-212ENST00000558662 SEC13P55735 322 aa14.24□□□□□ -0.13
HMBOX1-212ENST00000558662 SSPNQ14714 243 aa14.24□□□□□ -0.13
HMBOX1-212ENST00000558662 ACKR1Q16570 336 aa14.24□□□□□ -0.13
HMBOX1-212ENST00000558662 FAM90A2PQ658T7 463 aa14.24□□□□□ -0.13
HMBOX1-212ENST00000558662 LIAT1Q6ZQX7 453 aa14.24□□□□□ -0.13
HMBOX1-212ENST00000558662 OR2C3Q8N628 320 aa14.24□□□□□ -0.13
HMBOX1-212ENST00000558662 SEMA6DQ8NFY4 1073 aa14.24□□□□□ -0.13
HMBOX1-212ENST00000558662 OR4N2Q8NGD1 307 aa14.24□□□□□ -0.13
HMBOX1-212ENST00000558662 ZFYVE21Q9BQ24 234 aa14.24□□□□□ -0.13
HMBOX1-212ENST00000558662 NCOR1P1Q9H4R4 102 aa14.24□□□□□ -0.13
HMBOX1-212ENST00000558662 LRIT1Q9P2V4 623 aa14.24□□□□□ -0.13
HMBOX1-212ENST00000558662 HSF4Q9ULV5 492 aa14.24□□□□□ -0.13
HMBOX1-212ENST00000558662 SLC17A4Q9Y2C5 497 aa14.24□□□□□ -0.13
HMBOX1-212ENST00000558662 PTRH2Q9Y3E5 179 aaKnown RBP14.24□□□□□ -0.13
HMBOX1-212ENST00000558662 MUC22E2RYF6 1773 aaPredicted RBP14.24□□□□□ -0.13
HMBOX1-212ENST00000558662 FOXI3A8MTJ6 420 aaPredicted RBP14.23□□□□□ -0.13
HMBOX1-212ENST00000558662 RAD51DO75771 328 aa14.23□□□□□ -0.13
HMBOX1-212ENST00000558662 TMEM225BP0DP42 221 aa14.23□□□□□ -0.13
HMBOX1-212ENST00000558662 CTGFP29279 349 aa14.23□□□□□ -0.13
HMBOX1-212ENST00000558662 COL10A1Q03692 680 aa14.23□□□□□ -0.13
HMBOX1-212ENST00000558662 AGBL5Q8NDL9 886 aa14.23□□□□□ -0.13
HMBOX1-212ENST00000558662 TMEM52Q8NDY8 209 aa14.23□□□□□ -0.13
HMBOX1-212ENST00000558662 OR4C3Q8NH37 302 aa14.23□□□□□ -0.13
HMBOX1-212ENST00000558662 ADAMTS18Q8TE60 1221 aa14.23□□□□□ -0.13
HMBOX1-212ENST00000558662 ARHGAP5-AS1Q96IT6 56 aa14.23□□□□□ -0.13
HMBOX1-212ENST00000558662 SPIN2AQ99865 258 aa14.23□□□□□ -0.13
HMBOX1-212ENST00000558662 SPIN2BQ9BPZ2 258 aa14.23□□□□□ -0.13
HMBOX1-212ENST00000558662 ST6GALNAC5Q9BVH7 336 aa14.23□□□□□ -0.13
HMBOX1-212ENST00000558662 C11orf1Q9H5F2 150 aa14.23□□□□□ -0.13
HMBOX1-212ENST00000558662 GPR173Q9NS66 373 aa14.23□□□□□ -0.13
HMBOX1-212ENST00000558662 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.22□□□□□ -0.13
HMBOX1-212ENST00000558662 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.22□□□□□ -0.13
HMBOX1-212ENST00000558662 TTRP02766 147 aa14.22□□□□□ -0.13
HMBOX1-212ENST00000558662 TYMSP04818 313 aa14.22□□□□□ -0.13
HMBOX1-212ENST00000558662 PFN1P07737 140 aaKnown RBP14.22□□□□□ -0.13
HMBOX1-212ENST00000558662 CTLA4P16410 223 aa14.22□□□□□ -0.13
HMBOX1-212ENST00000558662 IGLV3-21P80748 117 aaPredicted RBP14.22□□□□□ -0.13
HMBOX1-212ENST00000558662 C4orf17Q53FE4 359 aa14.22□□□□□ -0.13
HMBOX1-212ENST00000558662 TMEM31Q5JXX7 168 aa14.22□□□□□ -0.13
HMBOX1-212ENST00000558662 OR4D5Q8NGN0 318 aa14.22□□□□□ -0.13
HMBOX1-212ENST00000558662 NPRL2Q8WTW4 380 aa14.22□□□□□ -0.13
HMBOX1-212ENST00000558662 FGF14Q92915 247 aa14.22□□□□□ -0.13
HMBOX1-212ENST00000558662 TSLPQ969D9 159 aa14.22□□□□□ -0.13
HMBOX1-212ENST00000558662 ADAT3Q96EY9 351 aaPredicted RBP14.22□□□□□ -0.13
HMBOX1-212ENST00000558662 MRGPRX4Q96LA9 322 aa14.22□□□□□ -0.13
HMBOX1-212ENST00000558662 TM2D1Q9BX74 207 aa14.22□□□□□ -0.13
HMBOX1-212ENST00000558662 PARD6AQ9NPB6 346 aa14.22□□□□□ -0.13
HMBOX1-212ENST00000558662 FKBP11Q9NYL4 201 aa14.22□□□□□ -0.13
HMBOX1-212ENST00000558662 CPAMD8Q8IZJ3 1885 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms