RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 SSX8Q7RTT4 187 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 WDR86Q86TI4 376 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 ADCK1Q86TW2 530 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 HIPK1Q86Z02 1210 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 BATF2Q8N1L9 274 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 PRR26Q8N8Z3 221 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 DEFB108BQ8NET1 73 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 OR2T33Q8NG76 320 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 OR6K6Q8NGW6 343 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 OR6N2Q8NGY6 317 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 THEM6Q8WUY1 208 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 RDH5Q92781 318 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 RNF183Q96D59 192 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 TBX5Q99593 518 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 COQ7Q99807 217 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 CIB1Q99828 191 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 OSBPL10Q9BXB5 764 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 C1QTNF5Q9BXJ0 243 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 LRMDAQ9H2I8 198 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 MUC13Q9H3R2 512 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 MARCH7Q9H992 704 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 TMEM165Q9HC07 324 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 STX18Q9P2W9 335 aaKnown RBP3.53□□□□□ -1.84
SPG11-211ENST00000558561 EIF3KQ9UBQ5 218 aaKnown RBP3.53□□□□□ -1.84
SPG11-211ENST00000558561 DUX4Q9UBX2 424 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 SLC22A13Q9Y226 551 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 POLR1DQ9Y2S0 133 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 WIPI2Q9Y4P8 454 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 IGHV3OR15-7A0A075B7D8 119 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 IGHV3OR16-10A0A075B7F0 116 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 IGHV1-69-2A0A0G2JMI3 117 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 GAGE10A6NGK3 116 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 CD300LBA8K4G0 201 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 A8MV72 311 aaPredicted RBP3.52□□□□□ -1.85
SPG11-211ENST00000558561 PRR23D1E9PI22 279 aaPredicted RBP3.52□□□□□ -1.85
SPG11-211ENST00000558561 M0R135 149 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 EBAG9O00559 213 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 TSPAN4O14817 238 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 PHF1O43189 567 aaPredicted RBP3.52□□□□□ -1.85
SPG11-211ENST00000558561 TMCC2O75069 709 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 CLIC3O95833 236 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 PTHP01270 115 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 PRR23D2P0DMB1 279 aaPredicted RBP3.52□□□□□ -1.85
SPG11-211ENST00000558561 ANXA8P13928 327 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 SLC25A16P16260 332 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 SRD5A1P18405 259 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 ALOX5APP20292 161 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 GSTM3P21266 225 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 PAX7P23759 505 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 FASP25445 335 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 OTX1P32242 354 aaPredicted RBP3.52□□□□□ -1.85
SPG11-211ENST00000558561 PSMB10P40306 273 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 OPRL1P41146 370 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 GPR6P46095 362 aaPredicted RBP3.52□□□□□ -1.85
SPG11-211ENST00000558561 TMEM33P57088 247 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 ZNF121P58317 390 aaPredicted RBP3.52□□□□□ -1.85
SPG11-211ENST00000558561 GMFBP60983 142 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 ACTR3P61158 418 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 LCN2P80188 198 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 TNFAIP6P98066 277 aaPredicted RBP3.52□□□□□ -1.85
SPG11-211ENST00000558561 FAM3AP98173 230 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 MFGE8Q08431 387 aaPredicted RBP3.52□□□□□ -1.85
SPG11-211ENST00000558561 TEX30Q5JUR7 227 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 FAM120AOSQ5T036 256 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 C1QTNF12Q5T7M4 302 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 SERTAD4-AS1Q5TG53 156 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 SLX4IPQ5VYV7 408 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 LPCAT4Q643R3 524 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 C12orf73Q69YU5 71 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 SLC27A4Q6P1M0 643 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 FBXW12Q6X9E4 464 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 MEPCEQ7L2J0 689 aaKnown RBP3.52□□□□□ -1.85
SPG11-211ENST00000558561 SLC16A9Q7RTY1 509 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 HDDC2Q7Z4H3 204 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 TBC1D26Q86UD7 250 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 RDH10Q8IZV5 341 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 ZNF283Q8N7M2 679 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 OR8G5Q8NG78 346 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 OR5T2Q8NGG2 359 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 OR52L1Q8NGH7 329 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 OR2AJ1Q8NGZ0 328 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 OR2T4Q8NH00 348 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 TEX47Q8TBZ9 253 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 TMEM163Q8TC26 289 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 FNDC8Q8TC99 324 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 C22orf15Q8WYQ4 148 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 APOBEC3DQ96AK3 386 aaPredicted RBP3.52□□□□□ -1.85
SPG11-211ENST00000558561 ELMOD3Q96FG2 381 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 ZNF799Q96GE5 643 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 CYYR1Q96J86 154 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 OR2V2Q96R30 315 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 INTS14Q96SY0 518 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 MBOAT4Q96T53 435 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 ATF6BQ99941 703 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 SLC30A2Q9BRI3 323 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 C1orf198Q9H425 327 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 RIBC2Q9H4K1 309 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 SP140LQ9H930 580 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 ELOVL3Q9HB03 270 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 SLC25A19Q9HC21 320 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms