RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 DDX19AQ9NUU7 478 aaKnown RBP1.98□□□□□ -2.09
SPG11-206ENST00000558093 SLC25A37Q9NYZ2 338 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 BFARQ9NZS9 450 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 LSM7Q9UK45 103 aaKnown RBP1.98□□□□□ -2.09
SPG11-206ENST00000558093 C14orf166Q9Y224 244 aaKnown RBP1.98□□□□□ -2.09
SPG11-206ENST00000558093 SNX24Q9Y343 169 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 ASB4Q9Y574 426 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 ARL5AQ9Y689 179 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 MTCH2Q9Y6C9 303 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 USH1CQ9Y6N9 552 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 V9GY05 133 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 BAZ1BQ9UIG0 1483 aaKnown RBP1.98□□□□□ -2.09
SPG11-206ENST00000558093 ARHGEF10O15013 1369 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 FLT4P35916 1363 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 KIAA0232Q92628 1395 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 KDM5BQ9UGL1 1544 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 BRCA1P38398 1863 aaKnown RBP1.97□□□□□ -2.09
SPG11-206ENST00000558093 ERCC6Q03468 1493 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 WDR7Q9Y4E6 1490 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 IGHV2-70DA0A0C4DH43 119 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 IGHV3-64DA0A0J9YX35 117 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 GLYATL1P3A0A0U1RQE8 302 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 KIR2DS1A0A191URI9 304 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 RFPL4AA6NLU0 287 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 EFCAB9A8MZ26 197 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 F5H6K3 240 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 RFPL4AL1F8VTS6 287 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 KCNK1O00180 336 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 PLPP3O14495 311 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 PFDN6O15212 129 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 SLC31A1O15431 190 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 CST8O60676 142 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 MPDU1O75352 247 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 TNFSF13O75888 250 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 KRT75O95678 551 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 RAB36O95755 333 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 CYB5R3P00387 301 aaPredicted RBP1.97□□□□□ -2.09
SPG11-206ENST00000558093 OXTP01178 125 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 PPBPP02775 128 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 CD74P04233 296 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 TYMSP04818 313 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 IFNA16P05015 189 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 H2BFMP0C1H6 154 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 OR8U9P0C7N5 309 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 ZDHHC11BP0C7U3 371 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 LIPCP11150 499 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 ZNF35P13682 527 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 GTF2F2P13984 249 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 ZNF823P16415 610 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 CRISP2P16562 243 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 TCP1P17987 556 aaKnown RBP1.97□□□□□ -2.09
SPG11-206ENST00000558093 CSNK2A2P19784 350 aaPredicted RBP1.97□□□□□ -2.09
SPG11-206ENST00000558093 PVALBP20472 110 aaPredicted RBP1.97□□□□□ -2.09
SPG11-206ENST00000558093 PSMA1P25786 263 aaKnown RBP1.97□□□□□ -2.09
SPG11-206ENST00000558093 GRPRP30550 384 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 FGF9P31371 208 aaPredicted RBP1.97□□□□□ -2.09
SPG11-206ENST00000558093 ARR3P36575 388 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 RFC3P40938 356 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 PMELP40967 661 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 TNFSF9P41273 254 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 RPS9P46781 194 aaKnown RBP1.97□□□□□ -2.09
SPG11-206ENST00000558093 KLK7P49862 253 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 VSX2P58304 361 aaPredicted RBP1.97□□□□□ -2.09
SPG11-206ENST00000558093 PAFAH1B2P68402 229 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 SLC35B1P78383 322 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 SEMG2Q02383 582 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 TGFBR3Q03167 851 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 KIR2DS1Q14954 304 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 SF3A2Q15428 464 aaKnown RBP1.97□□□□□ -2.09
SPG11-206ENST00000558093 MAPK14Q16539 360 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 PGGHGQ32M88 737 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 OR10J3Q5JRS4 329 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 C1orf100Q5SVJ3 147 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 MED27Q6P2C8 311 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 ZFP1Q6P2D0 407 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 DHRS4L2Q6PKH6 230 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 CD200R1LQ6Q8B3 271 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 TMEM179Q6ZVK1 233 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 GDPD3Q7L5L3 318 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 STPG2Q8N412 459 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 STX19Q8N4C7 294 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 TPRX1Q8N7U7 411 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 ATP6V0D2Q8N8Y2 350 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 NKAPP1Q8N9T2 125 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 TMEM161BQ8NDZ6 487 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 DUSP18Q8NEJ0 188 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 VN1R2Q8NFZ6 395 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 OR1M1Q8NGA1 313 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 OR4D9Q8NGE8 314 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 OR51D1Q8NGF3 324 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 OR52H1Q8NGJ2 320 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 OR1S2Q8NGQ3 325 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 OR9A2Q8NGT5 310 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 OR13D1Q8NGV5 346 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 OR10K1Q8NGX5 313 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 OR51F2Q8NH61 342 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 LHFPL5Q8TAF8 219 aa1.97□□□□□ -2.09
SPG11-206ENST00000558093 CHCHD10Q8WYQ3 142 aaPredicted RBP1.97□□□□□ -2.09
SPG11-206ENST00000558093 NDRG1Q92597 394 aaKnown RBP1.97□□□□□ -2.09
SPG11-206ENST00000558093 MRPS31Q92665 395 aaKnown RBP1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms